Trachemys scripta elegans (red-eared slider): 117874162
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Entry
117874162 CDS
T07347
Symbol
FOXA2
Name
(RefSeq) hepatocyte nuclear factor 3-beta isoform X1
KO
K08035
forkhead box protein A2, hepatocyte nuclear factor 3-beta
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117874162 (FOXA2)
Transcription factors [BR:
tst03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix developmental regulators
117874162 (FOXA2)
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Gene cluster
GFIT
Motif
Pfam:
Forkhead
HNF_C
Forkhead_N
Motif
Other DBs
NCBI-GeneID:
117874162
NCBI-ProteinID:
XP_034619912
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Position
3:5081513..5085712
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AA seq
437 aa
AA seq
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MAWTQSMLGAVKMEGHEHSDWSGYYAEPESYSSVSSMNPGLGMNSYMGMSAMSSGPANMS
GAGSMNMSYASTGMSPSLAGMSPGPGGMAGMGSGMGAHLSPSMSPMGAQAGSMNALAPYT
NMNSMSPMYGQGNLNRSRDPKTYRRSYTHAKPPYSYISLITMAIQQSPNKMLTLSEIYQW
IMDLFPFYRQNQQRWQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCY
LRRQKRFKCEKSKEGGGGGGGGGGGGGKKQPPQQQPPQPGEGGSSDSSAGGPESPHPGAS
PCREHKRALAELKGTPPQQAPSPAQHLLAPHHLAHEAHLKPEHHYAFNHPFSINNLMSSS
EQQPPPHHHHPHHHPHHHKMDLKAYEQVMHYSGYGSPMPGSLAMGPVTNKSGLEASPLAG
DTSYYQGVYSRPIMNSS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcttggacacagagtatgctgggagccgtgaaaatggaagggcacgagcactcggac
tggagcggctactatgcagaacccgagagctattcctccgtgagcagcatgaacccgggc
ctgggcatgaacagctacatgggcatgtcggccatgagcagcggcccggccaacatgagc
ggggccggctccatgaacatgtcctacgccagcaccgggatgagcccgtccttggccggc
atgtctcccggcccggggggcatggccggcatgggcagcggcatgggggcccacctgagc
cccagcatgagtcccatgggggcccaggccggctccatgaacgccctggccccctacacc
aacatgaactccatgagccccatgtacgggcaaggcaacctcaaccgctcgcgggacccc
aagacctaccggcggagctacacccacgccaagcccccctactcctacatctcgctcatc
accatggccatccagcagtcgcccaacaagatgctgacgctgagcgagatctaccagtgg
atcatggacctgttccccttctaccggcagaaccagcagcgctggcagaactccatccgc
cactcgctctccttcaacgactgcttcctcaaggtgccccgctccccggacaagccgggc
aagggctccttctggactctgcacccggactcgggcaacatgttcgagaacggctgctac
ctacgccgccagaagcgcttcaagtgcgagaagagcaaggaagggggcggcggcggaggg
ggcggcggcgggggaggggggaagaagcagcccccccagcagcagcccccccaacccggg
gaaggaggctcctccgacagctcggcgggtgggcccgagtccccccaccccggcgcctcg
ccctgccgcgagcacaagcgggccctggccgagctcaaagggacccccccgcagcaggcc
ccgtcgccggcccagcacctgctcgccccccaccacctggcccacgaggcccacctcaag
cccgagcaccactacgccttcaaccaccccttctccatcaacaacctgatgtcctcctcc
gagcagcagccgcccccccaccaccaccacccgcaccatcacccccaccaccacaaaatg
gacctcaaggcctacgagcaggtgatgcactactccggctacggctcccccatgcccggc
agcctggccatgggccccgtcacgaacaaaagtggcttagaagcctccccgctggccgga
gacacctcttattaccaaggtgtgtattcccggcccatcatgaactcgtcctaa
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