Trachemys scripta elegans (red-eared slider): 117874176
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Entry
117874176 CDS
T07347
Symbol
FBH1
Name
(RefSeq) LOW QUALITY PROTEIN: F-box DNA helicase 1
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117874176 (FBH1)
Enzymes [BR:
tst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
117874176 (FBH1)
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117874176 (FBH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
F-box-like
UvrD_C
UvrD_C_2
AAA_19
F-box
Viral_helicase1
AAA_30
F-box_4
AAA_12
zf_Tbcl_Rhp7
ResIII
Motif
Other DBs
NCBI-GeneID:
117874176
NCBI-ProteinID:
XP_034619936
LinkDB
All DBs
Position
1:complement(5582731..5621326)
Genome browser
AA seq
1037 aa
AA seq
DB search
MRAFKRKHLTASDCEAFSQSGEGSSSLTQPFSQRRASGDLNRGLYPTYRTKRQQEGQGHQ
RSITDYFKVSQRPPTGNKVAKNNEVKEESLDSFFMDEGLEDHCALLGCDGDAKTSPWGPV
ASRKRPLCSEGAGSNYTEDSRCGGTDKKPTMDSSLKCFPGHTQIRQDPDVIEIDPIPDSY
FGLLGTSCGKEPQGHIDQLPNEVLSIIFAFLPVTDLCLNLSLVCHRWREIISDPLFVLWK
KLYRQYLMKEAQALLTVEWILDHYGITQEQDQCMLGFIRYMAASNATRRMDPEAVLRCLK
QHHLFTKAEICIIQRLPDLEGTAGAVNVWAVMAAIVLFSDGVRDIQKLMACLRRPSSTLS
VLDITEMLYCMATLLNAMREKGINISNRFHYSIFYCLYLMENSCPVTKTTKLETPSSNCG
RGTWPSNKLDIKLTHEQQRILNHTILPGQVVKIMAFAGTGKTSTLVKYAEKFPHLSFLYV
AFNKAIVESGKSVFPPNVMCKTFHSLAYANVGKYYNEKGKLNFSNLSPYTISFILKHRMG
QSLFVRAKTVTQTLESFFASPDEFIXVEHTPIWCKNTHGMRVLVCEEEKQIIVEEARRIW
DNMKMLNGNTELNCKMTSDGYLKLWQLKKLQLFAYDAIFVDEAQDCTPAILDIVLSQTCG
IIFVGDPHQQIYTFRGAVNALFAVPHTHIFYLTQSFRFGPEIAYIGSTILDVCKKIRNKM
LVGGNQEGDVRGSTNGKTAFLSRGNFNVFENAVTITGGERPTKIHLLGGPKNFGLDKIHD
IWKLLQPEEARVRLKLQIDDHFIKKWVEKDGFQGLKNYAAKTEDRELEVKITIVEKYNVR
IPELVARIKNSHVSNIAFADYVIGTVYKAKGLEFDTVLVADDFMKVPCARHNLQRLPHFI
TDMSAEDEWNLLYVAVTRAKKHLLMTKSLEYLLTLAGEYFLRPELTSEALKEGAIHCSVS
QCHNAVPADSILTMKKVPLAYSNGSKDQGGYLCHACVQQRLGPLTQLTVSPELVLTMDVV
DEALEIPRHVAVLYDLF
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgagagcatttaaacgaaagcaccttacagccagtgactgtgaagcattcagccagagc
ggagaaggctcatcttccctgacgcagcctttcagtcaaagacgggcgagcggagatcta
aacaggggcctctaccctacgtacagaaccaagagacagcaagaaggacagggtcatcag
aggagcatcactgattacttcaaagtcagtcagaggccacccaccggtaacaaagtggca
aaaaacaatgaagttaaagaagagtcgttggattccttcttcatggacgaggggttggag
gatcactgtgccctccttggatgtgatggagatgctaaaacgtctccctggggtcctgtg
gcctctaggaaacggcctctctgctcagaaggagctgggagcaattatacagaagacagt
agatgtggtgggactgataaaaagcccacgatggacagttccctcaagtgttttccagga
cacacacaaatcagacaagaccctgatgtcatagaaattgatccaattcctgattcatat
tttgggctcctagggacttcatgcggtaaagaaccccaaggacacattgaccagctgccc
aatgaagtcctgagcattatctttgctttcctccctgtgactgatctctgtctgaacctg
agcttggtgtgtcatcgctggagagagattatcagtgatccattgtttgtcctgtggaaa
aagctgtatcgtcagtacctcatgaaggaggcccaggctctgctcacagttgaatggatt
ctggatcattatggtataacccaagagcaggatcagtgcatgctgggatttataaggtat
atggccgcctccaatgctacccggagaatggaccccgaagcagttctcagatgcttgaag
cagcaccacctgtttaccaaggcagaaatatgcatcatccagagactgcctgatttagag
ggcactgcgggggctgtgaacgtgtgggccgtgatggcagctattgtgctcttctctgat
ggcgttcgtgacatccagaagctgatggcttgtcttaggagacccagctctaccctttca
gtcctggacatcactgagatgttgtactgtatggccacactgctgaatgcaatgagagag
aagggcatcaatataagtaacaggtttcactacagtattttctactgcttgtatttgatg
gagaactcttgccctgttactaagacgacaaagctggaaacacccagttcaaactgtgga
agaggcacttggcccagtaataagctggacataaaactaacccacgaacagcaaaggatc
ctaaaccacacaatcttgcctggtcaagtagtgaaaattatggcatttgcaggtacggga
aagacctcgactttggtcaagtatgcagagaagtttccccatctcagctttctgtatgtg
gcatttaacaaggccatcgtggagagcggaaagagtgtcttcccccctaacgttatgtgc
aagactttccattcgttagcgtacgcgaatgtcggcaaatactataatgaaaaaggcaaa
ctaaatttttccaacctgtcaccctacacgatcagcttcatcctcaaacatcgcatggga
caatctctcttcgtaagagcaaagacagtaactcagacgcttgaaagcttttttgcttct
ccagatgaattcatataggtggagcacacccccatatggtgcaaaaatacacacggcatg
agggtcctagtctgtgaagaagagaagcaaatcattgttgaagaagcaagacggatatgg
gacaatatgaaaatgctaaatggaaatacagaactgaattgcaaaatgacatcggatggg
tatttgaagctttggcagcttaagaagctgcagctttttgcatatgatgccatatttgtg
gatgaagcacaagactgcacgccagccatcctggacattgtgctgtcccagacctgtgga
ataatctttgtaggagacccacaccaacagatctataccttccgaggtgctgtcaatgcg
ctcttcgcagtgccacacacccacatcttctatctcacacagagtttcagatttggccct
gaaatagcttacattggatctactatcttggatgtctgcaagaaaatccggaataagatg
ttagtgggtggaaatcaagagggtgatgtcagaggcagcacgaatggaaagactgctttc
ttatcacggggcaatttcaatgtgtttgagaatgcagtgacaattactggaggagagaga
ccaacaaaaatacacttgcttggggggcctaaaaattttggactagacaaaattcatgat
atttggaaactccttcaacctgaagaggcccgtgtgagattgaaactccaaattgatgac
cactttatcaaaaagtgggttgaaaaggatggcttccagggtttaaagaactatgcagcc
aaaactgaagacagggagctggaggtgaagatcacaatagtggagaaatacaatgtccgc
attcccgagctggtggcgaggataaagaacagtcacgtatcaaatatagcatttgcagat
tatgtgataggcaccgtgtacaaagcaaaaggcctggagtttgatactgtgctggttgca
gatgattttatgaaagtcccttgtgccaggcataatctccagaggctgcctcactttatc
actgacatgtctgctgaagatgaatggaacttgctgtatgttgcagtgactcgtgccaaa
aagcatctgttaatgacaaagtccctggaatatcttttgactttggctggggagtatttc
ttgcggccagagttgactagtgaggccttaaaggaaggggcaattcattgctccgtgtca
cagtgccacaacgctgtgcctgctgactcgattctaaccatgaagaaagtgcccctcgct
tacagcaatggcagcaaagaccaaggtggctacctgtgccatgcttgcgtgcagcagcgt
ctcggccccttgacacagctaactgtttcacctgagctggtcctgaccatggatgtcgtc
gatgaagcgttagaaattccgaggcacgttgctgtcctctatgacctgttttga
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integrated database retrieval system
