Trachemys scripta elegans (red-eared slider): 117874216
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Entry
117874216 CDS
T07347
Symbol
PLCB1
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1
KO
K05858
phosphatidylinositol phospholipase C, beta [EC:
3.1.4.11
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00562
Inositol phosphate metabolism
tst01100
Metabolic pathways
tst04020
Calcium signaling pathway
tst04070
Phosphatidylinositol signaling system
tst04081
Hormone signaling
tst04082
Neuroactive ligand signaling
tst04261
Adrenergic signaling in cardiomyocytes
tst04270
Vascular smooth muscle contraction
tst04310
Wnt signaling pathway
tst04371
Apelin signaling pathway
tst04540
Gap junction
tst04621
NOD-like receptor signaling pathway
tst04912
GnRH signaling pathway
tst04916
Melanogenesis
Module
tst_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
117874216 (PLCB1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117874216 (PLCB1)
04371 Apelin signaling pathway
117874216 (PLCB1)
04020 Calcium signaling pathway
117874216 (PLCB1)
04070 Phosphatidylinositol signaling system
117874216 (PLCB1)
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117874216 (PLCB1)
04081 Hormone signaling
117874216 (PLCB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
117874216 (PLCB1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117874216 (PLCB1)
09152 Endocrine system
04912 GnRH signaling pathway
117874216 (PLCB1)
04916 Melanogenesis
117874216 (PLCB1)
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
117874216 (PLCB1)
04270 Vascular smooth muscle contraction
117874216 (PLCB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117874216 (PLCB1)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
117874216 (PLCB1)
Membrane trafficking [BR:
tst04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
117874216 (PLCB1)
Endocytosis
Macropinocytosis
Phospholipase C
117874216 (PLCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PLC-beta_C
PH_14
PI-PLC-Y
PLCB1-4-like_EFh
EF-hand_like
GP24_25
Motif
Other DBs
NCBI-GeneID:
117874216
NCBI-ProteinID:
XP_034619997
LinkDB
All DBs
Position
3:9840743..10471732
Genome browser
AA seq
1218 aa
AA seq
DB search
MAGAQPGVHALQLKPVCVSDLLKKGTKFVKWDDDSTVVTPILLRTDPHGFFFYWTDQNKE
TELLDLSFVRDARCGKHARAPKDPKLRELLDAGNLGGRLENRMITVVYGPDLVNISYLNV
VAFQDEIAKEWTDEVFSLATNLLAHNMSRDAFLEKAYTKLKLQVTQEGRIPLKSIYRLFS
ADRKRVETALEACSLPSARNDSIPQEDFTPEAYRVFLNNLCPRPEIDHIFSEFGAKSRPY
LTVDQMMEFINYKQRDPRLNEILYPPMKQEQVQQLIEKYEPNNTLAKKGQISVDGFMRYL
SGEENGVVPPEKLDLNEDMSQPLSHYLINSSHNTYLTAGQLAGNSSVEMYRQVLLSGCRC
VELDCWKGRTAEEEPVITHGFTMTTEISFKEVIEAIAECAFKTSPFPILLSFENHVDSPK
QQAKMAEYCRLIFGDALLMDPLEKYPLESGVPLPSPMDLMYKILVKNKKKSQKSADGSSK
KKLSEQASNTCSDTSSGFEPSSPGAGEAEIESDDDDDYDDDCKKSSTDEGTAGREAMATE
EMSNLVNYIQPVKFESFEISKKRNRSFEMSSFVETKGLEQLTKSPVEFVEYNKRQLSRIY
PKGTRVDSSNYMPQVFWNAGCQLVALNFQTVDLSMQINMGMYEYNGKSGYRLKPEFMRRP
DKHFDPFTESIVDGIVANTLSVKIISGQFLSDKKVGIYVEVDMFGLPVDTRRKALKTKTS
QGNAVNPVWEEEPIVFKKVVLPSLACLRIAVYEEGGKFIGHRILPVSAIRPGYHYICLRN
ERNQPLMLPAVFVYIDVKDYVPDTYADVIEALSNPIRYVNLMEQRAKQLAALTLEDEEEV
KKEVDQGDAPSEANNEPRPTPAENGLSHSTSLTTKPATQVVHSQPAPGSVKAPAKTEDLI
QSVLTEVEAQTIEELKQQKSFVKLQKKHYKEMKDLVKKHHKKTTDLIKEHTAKYNEIQND
YLRRRAVLEKNTKRESRKRCETGSPDHSSTIEQELAALDSEMTQKLIELKEKQQQQLLNL
RQEQYYSEKYQKREHIKLLIQKLTDVAEECQSSQLKKLKETCEKEKKELKKKMDKKRQEK
ITEAKSKDKNQVDEEKTEMIRSYIQEVVQYIKRLEDAQSKRQEKLVEKHKEIRQQILDEK
PKLQGELDQEYQDKFKRLPLEILEFVQDAMKGKISEDGDHSSATSSLTSESGKLNHKPLQ
NEEETEENNPDKVFDTPF
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atggccggggcacagccaggcgtccacgcgctgcagctcaaacccgtctgcgtctccgac
ctcctgaagaagggcaccaaatttgtcaagtgggacgatgattcaactgttgtgactcca
attcttcttagaacagatccacatggatttttcttttactggacagatcagaataaggag
acagagctgctagatctcagttttgtcagagatgccagatgtgggaaacatgccagagct
cccaaggatccaaaattgcgtgaactgttggatgctgggaacctaggaggtcggctggag
aatcgaatgataactgttgtctatggtccagacctggtcaatatatcatatttgaacgta
gtggcatttcaagacgaaatagcaaaggaatggacggacgaagttttcagtttggcaaca
aacctgctggcacacaacatgtcaagggatgcatttctggaaaaagcttacacaaaattg
aagctgcaagtcactcaagaaggacgtattcctctgaagagcatataccgcttgttttcc
gctgacagaaagcgagtagagactgcattagaagcttgtagccttccatctgccaggaac
gattcaatccctcaagaggacttcaccccagaagcatacagagtattcttaaacaatctc
tgccctcggcctgaaattgaccacatcttttctgagttcggtgccaagagcagaccatac
cttactgttgatcagatgatggagtttataaattataagcaacgtgatccacggttaaat
gaaatcctttatccgccgatgaaacaggagcaagttcaacaactgattgagaaatatgaa
cccaataatactctagcaaagaaaggacagatatcagtggatggatttatgcgatacctg
agtggagaggagaatggcgttgttccacctgagaaactggatttgaatgaagatatgtct
cagccattgtctcactatttgatcaattcttcacacaacacctacctcacagctggacag
ctggctggtaactcctcagtagagatgtatcgccaagtgctcttgtcaggctgccgctgt
gtggagctggactgctggaaaggacgaacagcagaagaagagcccgtcattacacatgga
ttcaccatgacaacggaaatatccttcaaggaagtaatagaagctattgctgagtgtgca
tttaagacatcgccttttccgatcctcctttcctttgaaaaccatgtggattcccctaag
cagcaagccaaaatggcagaatattgccgattaatttttggggatgcactgctgatggat
ccactggaaaaatacccacttgaaagtggcgttccccttccaagccctatggacttgatg
tacaaaattctggtgaagaataaaaagaaatcacaaaagtctgccgacggaagttcaaaa
aagaagctctctgagcaggcgtccaacacgtgcagtgatacgtccagtgggtttgaaccc
tcatctcctggagcaggagaagcagagatcgagagtgacgacgacgatgactatgatgat
gactgcaaaaaatcgtcaacggatgaaggcactgctggcagagaagccatggccactgaa
gaaatgtctaacctggtgaactacatacagccagtgaagtttgagtcatttgagatatca
aaaaaacgcaacaggagttttgaaatgtcttcctttgtggaaaccaaagggcttgagcaa
ctcacgaagtctccagtggaattcgtggaatataacaaaaggcagcttagcaggatttat
ccaaagggaacacgtgtagattcctcaaactacatgccacaagtcttctggaatgctggc
tgtcaactggttgctcttaacttccaaactgtagatttgtctatgcaaataaacatgggg
atgtatgaatacaatggcaaaagtggttacaggctaaagccagagtttatgagaagacca
gacaaacattttgacccatttactgaaagtattgtggatggaatagtagccaacaccttg
tctgtgaagataatttcaggccagtttctttcggataaaaaagttggtatttatgtagaa
gtagacatgtttggcctgcctgtggatacaagacgaaaagctttaaagacaaagacctct
caaggcaatgctgttaatcctgtatgggaagaagaacccatagtatttaagaaggtggtt
ctgccttctctggcatgtttgaggatagccgtatacgaagaaggaggaaagtttattgga
catcggatattgcctgtctcagcaattcgaccaggctatcactacatctgtctgaggaat
gagcggaaccaacctttgatgctgccagcagtctttgtgtacatagacgttaaagattat
gtacccgatacttatgcagatgtgattgaagcattatccaatccaattagatacgtaaac
ttgatggaacaaagagctaaacagctggcagcactcacactggaggatgaagaagaggta
aagaaagaggttgatcagggggatgcaccatcagaagctaataatgagcccagaccaaca
ccagcagaaaatggactaagtcactccacttctctgacaacgaagccagcaactcaggtt
gtccatagtcaaccagccccgggttctgtgaaagcacctgcaaaaacagaagatcttatt
cagagtgtcctaacagaagtggaagcacagactattgaggagctaaaacaacagaagtca
tttgttaaacttcagaagaagcactacaaagaaatgaaggaccttgtaaagaaacaccac
aagaaaaccactgatctgatcaaagagcacactgcaaaatacaacgaaatccagaacgac
tacctgcgtcgtagggcagtcttagaaaaaaacacaaaaagggaaagtaggaaaagatgt
gaaactggcagcccggatcacagttcaactattgaacaagaactggctgcccttgactca
gaaatgacccagaagttaatagaactgaaggaaaagcaacaacagcagctgctcaatctc
cgacaagaacagtattatagtgaaaagtatcagaagcgagaacatattaagctgctcatt
cagaagctgacagatgtggcagaggaatgtcagagcagccagttaaagaaactgaaagag
acttgtgaaaaagaaaagaaggagttaaagaagaaaatggacaagaagagacaggagaag
atcacggaagctaaatccaaggataaaaatcaagtggacgaggagaagacggaaatgatt
cgatcgtatatccaggaagtggtgcagtacataaagaggctagaagatgctcagagtaaa
agacaggagaaacttgtagaaaaacacaaggagattcgtcagcaaatactggatgaaaag
cccaagttacaaggtgaacttgatcaggaatatcaagacaaattcaaaaggctccctctg
gaaattctggagtttgtacaggatgccatgaaagggaaaatcagtgaagatggagaccac
agttctgccacttcctccctgacatctgaaagtggaaaactgaaccataaacctctgcaa
aatgaagaggaaacagaagaaaataatccagataaagtgtttgatactcctttttaa
DBGET
integrated database retrieval system
