Trachemys scripta elegans (red-eared slider): 117874229
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Entry
117874229 CDS
T07347
Symbol
JAG1
Name
(RefSeq) protein jagged-1 isoform X1
KO
K06052
jagged-1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04330
Notch signaling pathway
tst04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117874229 (JAG1)
04371 Apelin signaling pathway
117874229 (JAG1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tst04090
]
117874229 (JAG1)
CD molecules [BR:
tst04090
]
Proteins
117874229 (JAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
MNNL
EGF_TEN
JAG1
EGF_2
EGF_DL_JAG
DSL
JAG1-like_EGF2
EGF_CA
EGF_Teneurin
cEGF
Motif
Other DBs
NCBI-GeneID:
117874229
NCBI-ProteinID:
XP_034620022
LinkDB
All DBs
Position
3:complement(11626116..11663041)
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AA seq
1213 aa
AA seq
DB search
MPLPRRPALAPLLLALLCLRGKVTRASGHFELEILSMQNVNGELQNGNCCDGPRNPGDRK
CTKDECDTYFKVCLKEYQSRVSAGGPCSFGSGSTPVIGGNTFNLKYNRNNERNRIVLPFS
FAWPRSYTLLVEAWDYSNDTANPDSIIEKASHSGMINPSRQWQTLKQNAGIAHFEYQIRV
TCDEHYYGFGCNKFCRPRDDFFGHHTCDQNGNKTCLEGWMGPECSKAICRQGCSPKHGSC
KTPGECRCQYGWQGQYCDKCIPHPGCVHGTCTEPWQCLCETNWGGQLCDKDLNYCGTHPP
CLNGGTCSNTGPDKYQCSCPEGYSGQNCEIAEHACLSDPCHNGGSCLETSTGFECVCTPG
WAGPTCTLNIDDCSPNPCGHGGTCQDLVDGFKCICPPQWTGKTCQLDANECEGKPCVNAN
SCRNLIGSYYCDCIAGWSGQNCDININDCLGQCQNGGSCRDLVNGYRCICPPGYAGDHCE
KDINECASNPCLNGGHCQDEINGFQCLCPAGFSGNFCQLDIDYCEPNPCQNGAQCFNLNT
DYFCNCPEDYEGKNCSHLKDHCRTTPCEVIDSCTVAVASNSTPEGVRYISSNVCGPHGKC
KSQAGGKFTCECNKGFTGTYCHENINDCESNPCKNGGTCIDGINSYKCICSDGWEGIYCE
TNINDCSKNPCHNGGTCRDLVNDFFCECKNGWKGKTCHSRDSQCDEATCNNGGTCYDEGD
TFKCMCPVGWEGATCNIARNSSCLPNPCHNGGTCVVSGDSFTCVCKEGWEGPTCTQNTND
CSPHPCYNSGTCVDGDNWYRCECAPGFAGPDCRININECQSSPCAFGATCVDEINGYRCI
CPPGRSGPRCQEVTGRPCINNGRVMSDGAKWDDDCNTCQCWNGKVACSKVWCGPRPCLMH
VKGHECPAGHTCVPIKDDHCFTHPCSGVGVCWPSNQQPIKTKCNSDSYYQDNCANITFTF
NKELMVSGLTTEHICSDLRNLNILKNVSVEYSIYITCEPSHLAHNEIHVAISAEDIGKDE
NPVKEITDKIIDLVSKRDGNNTLIAAVAEVRVQRRPIKNKTDFLVPLLSSVLTVAWICCL
VTAFFWCIRKRRKQSSHTHTASDDNTTNNVREQLNQIKNPIEKHGANTVPIKDYENKNSK
IAKIRTHNSEVEEDDMDKHQQKSRFVKQPAYTLVDRDEKLPNSTPTKHPNWTNKQDNRDL
ESAQSLNRMEYIV
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgcccttacccaggcgacccgccctcgcccctctcctcctcgccttgctgtgtctgcgg
ggaaaggtgactcgagcgtccggacacttcgaactggagatcttatccatgcaaaacgtc
aatggcgaattgcaaaatgggaattgctgcgatggcccccgaaacccaggagatcggaag
tgcacgaaagacgagtgtgatacgtattttaaagtttgcctgaaggagtatcaatcccgg
gtctctgctggcggcccttgcagcttcggctccggatctacgcccgtcatcggagggaat
acctttaatttaaaatacaaccggaataacgaaaggaaccggattgttctcccgttcagc
tttgcctggccgcgatcctatacgttgcttgttgaggcatgggattacagcaatgacact
gctaatcctgatagcattatcgaaaaggcatcgcactccggtatgatcaatccgagccgt
cagtggcagactctgaagcaaaacgcaggcattgcccattttgagtaccagatccgcgtg
acttgtgatgagcattactatggctttggctgcaacaagttttgtcgaccgagagacgac
ttcttcggccaccatacctgtgatcagaatggcaacaagacttgtctggaaggctggatg
gggccagaatgcagcaaagctatttgccgtcagggttgtagtcccaagcatggttcttgc
aaaactccaggagaatgcaggtgtcagtacggatggcaaggccagtactgtgataagtgc
attccgcacccaggatgtgtccatggcacttgcactgaaccatggcaatgcctctgtgaa
accaactggggtggtcagctctgcgataaagatcttaactactgtgggactcacccgcct
tgtttgaatggtggtacctgcagcaacaccgggcctgacaaatatcagtgttcctgtccc
gagggctactcaggacagaactgtgaaatcgcggaacacgcctgcctttctgatccttgt
cacaatggaggaagctgcttagaaacctctaccggatttgagtgtgtgtgcacgcctggc
tgggctggaccaacgtgcactcttaatattgatgattgttctccgaatccctgtggtcat
ggaggcacctgccaggatctcgttgatggcttcaagtgtatttgcccacctcagtggact
gggaaaacgtgccagctagatgcgaatgaatgtgaaggcaaaccttgtgtcaatgccaac
tcctgcaggaacctgattggcagctactattgtgactgcattgctggctggtctggccag
aattgtgatataaatattaacgactgtcttggacaatgtcagaatggaggatcctgccgg
gacttggttaatggttatcgatgtatctgtccgcctggctacgcaggagatcactgtgag
aaagacatcaatgaatgtgcaagcaacccttgcttgaatgggggtcactgtcaggatgaa
atcaatggattccagtgtctgtgtcctgctggtttctcaggaaacttctgtcagttggac
atagattattgtgagcccaacccttgccagaacggtgcccagtgcttcaatcttaacaca
gattacttctgtaactgtcctgaagattacgagggaaagaactgctcccacctgaaagat
cactgtcgcactactccttgtgaagtaattgacagctgtacagtggctgtggcttctaac
agcacgcccgaaggagttcgttatatttcttcaaatgtctgcggtccccatgggaaatgc
aagagccaagcaggtggaaaattcacctgtgaatgcaacaaaggcttcaccgggacctac
tgccatgaaaatatcaatgactgtgaaagcaatccatgtaaaaatggtggcacttgcatt
gacggcatcaactcctacaaatgtatttgtagcgatggatgggaaggaatttattgtgaa
acaaatattaatgactgcagtaaaaacccttgccacaatggggggacgtgccgagatttg
gtcaatgacttcttctgtgaatgtaaaaacggctggaaaggaaaaacttgccactcccgt
gatagccagtgcgatgaggctacatgcaataatggaggaacgtgctatgatgagggagac
actttcaagtgcatgtgtcccgtgggatgggaaggagccacttgtaatatagcgagaaac
agcagctgcttgccaaatccctgtcataatggtggtacctgtgtcgtcagtggggattct
tttacttgtgtctgcaaagagggctgggaaggacctacttgcactcagaatacaaatgat
tgcagtcctcacccttgttacaacagtggaacttgtgttgatggggacaactggtaccgc
tgtgaatgtgctccaggctttgctggtccagactgcaggataaatatcaacgaatgccag
tcgtcaccctgtgcctttggagctacgtgcgtggatgaaattaatgggtaccgttgcatt
tgcccacctggtcgcagtggcccaagatgccaagaagttacaggaaggccttgtattaac
aatgggcgagtgatgtctgatggagctaaatgggatgatgattgcaatacctgtcagtgt
tggaatggaaaggtcgcatgctctaaggtttggtgtggtcctagaccttgcctgatgcat
gtcaaaggtcacgagtgcccagctggccacacctgtgtccctattaaggatgaccactgc
tttacacatccctgttctggagtgggtgtatgctggccttcaaatcaacaaccgataaag
accaaatgcaattcggactcttactatcaggacaattgcgccaacatcacttttaccttc
aacaaagagctgatggtctcaggtcttaccactgagcacatttgcagtgacttgaggaat
ctgaatattttgaagaatgtttctgttgaatattctatctacattacctgtgagccttca
cacttagcacacaatgaaatccatgttgctatttctgctgaagatataggaaaggatgaa
aaccccgtcaaagaaatcacagataaaattattgacctggttagtaagcgtgacggaaac
aacacactaattgctgccgttgcagaagtcagggtacagcggcgaccaattaaaaataaa
accgatttcttggtgccgttattgagctccgttttaacagtagcgtggatctgttgcctg
gtaactgccttcttctggtgcattcggaaacgcagaaagcagagcagccacactcacact
gcgtccgacgacaacactacaaacaacgtgcgggagcagctgaatcagatcaagaacccc
attgagaaacacggcgcaaacacagtccccatcaaagactatgaaaacaagaactccaaa
atcgccaaaataaggacacacaactcggaagtggaggaagacgacatggacaagcaccag
cagaagagccgctttgtcaaacagccagcgtatacactggtagacagagatgaaaagctc
cccaatagcactccgacaaaacacccgaactggacaaacaaacaagacaacagagacttg
gaaagcgcacaaagtttaaatcggatggagtacattgtatag
DBGET
integrated database retrieval system
