Trachemys scripta elegans (red-eared slider): 117874297
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Entry
117874297 CDS
T07347
Symbol
XPO1
Name
(RefSeq) exportin-1 isoform X1
KO
K14290
exportin-1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03008
Ribosome biogenesis in eukaryotes
tst03013
Nucleocytoplasmic transport
tst03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117874297 (XPO1)
03008 Ribosome biogenesis in eukaryotes
117874297 (XPO1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117874297 (XPO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117874297 (XPO1)
03009 Ribosome biogenesis [BR:
tst03009
]
117874297 (XPO1)
03016 Transfer RNA biogenesis [BR:
tst03016
]
117874297 (XPO1)
03036 Chromosome and associated proteins [BR:
tst03036
]
117874297 (XPO1)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
117874297 (XPO1)
Ribosome biogenesis [BR:
tst03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
117874297 (XPO1)
Pre-60S particles
117874297 (XPO1)
Transfer RNA biogenesis [BR:
tst03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
117874297 (XPO1)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
117874297 (XPO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
mTOR_dom
BspA_v
Hydrolase_3
Motif
Other DBs
NCBI-GeneID:
117874297
NCBI-ProteinID:
XP_034620155
LinkDB
All DBs
Position
3:20159345..20235962
Genome browser
AA seq
1071 aa
AA seq
DB search
MPAIMTMLADHAARQLLDFNQKLDINLLDNVVNCLYHGEGAQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYGLQILENVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDPTCV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFD
FSSGQITQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLIYKFLNVPMFRNVSLKCLTEIAGVSVSQYEEQFVTLFTLTMMQLKQMLPL
NTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSASPLLSGSQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQTVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQANGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVAENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEE
YPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKIST
PLNPGNPLNNQMFIQEYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDTSDLFLEERETALRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaattatgacaatgttagcagaccatgcagctcgtcagctgctggatttcaac
cagaaattggatatcaatctcttggacaatgtggtgaattgcctgtaccatggagaagga
gcccagcaaagaatggcccaggaagtcttgactcacttaaaagaacatcctgatgcatgg
accagagttgatactattttggagttctctcagaatatgaacaccaaatattatggactg
caaattttggaaaatgtgataaaaacaagatggaaaattcttccaaggaaccagtgtgaa
ggaataaaaaagtatgttgtcggcttaattatcaagacctcatctgatccaacatgtgta
gaaaaagaaaaagtgtatattggaaaactgaatatgattcttgttcagatactgaaacag
gaatggcccaaacactggccaacattcataagtgatatcgtaggggcaagccggacaagt
gagagtctttgccagaacaatatggtgatccttaaactgttaagtgaagaagtttttgac
ttctccagtggacagataacgcaagtgaaagccaagcatttgaaagacagtatgtgcaat
gaattctctcagatatttcaactgtgtcagtttgtgatggaaaattcccaaaacgctccc
cttgttcatgcaactttggaaactttgctaagattccttaactggattcccctgggatac
atttttgagaccaagttaatcagcacattaatatacaagtttttaaatgttcccatgttt
cgaaacgtctctttgaagtgcctcacagagattgcaggtgtcagtgttagccagtatgag
gaacagtttgtaaccctctttacgctgaccatgatgcagttgaaacagatgcttccttta
aacaccaatattcgacttgcatactccaatggaaaagatgatgaacagaacttcattcag
aatctcagcttgtttctctgcacatttctcaaggaacatggtcagcttatagaaaagaga
ttaaatctgagggaaaccttaatggaggctcttcattatatgttgctggtgtcagaagtc
gaagaaactgaaatttttaagatttgtcttgaatactggaatcatttggctgctgaactg
tatagagagagtccattttcaacatctgcttctccattgctttcgggaagtcaacatttt
gatgttcctcccaggagacagctttatctgcctgttctgtcaaaggtccggttgttaatg
gttagccgaatggctaaaccagaagaagtgctggttgtggaaaatgatcagggggaagtc
gtacgagaattcatgaaggatacagattccataaacttgtacaagaatatgagggagact
ctggtttatcttacgcatctggattatgcagatactgaacgaataatgacagaaaaactt
cacaatcaagtgaatggaacagaatggtcatggaagaatttgaatactctgtgttgggct
attgggtcaatcagtggagcaatgcatgaagaggatgaaaaacgatttcttgttacagta
attaaggatcttctgggactctgtgaacaaaagcgagggaaagataacaaagctattatt
gcatcaaatatcatgtatatagtaggtcaatatccacggttcttgagagctcactggaaa
tttttgaagacagtagtcaacaagctatttgaattcatgcatgaaacccatgatggtgtc
caggatatggcttgtgataccttcataaaaatagcacagaaatgccgccgacactttgtt
caggttcaagtgggagaagtcatgccattcattgatgagatcctgaacaatattaataca
atcatttgtgatcttcagccacagcaggtgcatacattctatgaagctgttggatacatg
attggggcacagactgaccaaactgtacaggagcatctgatagaaaaatacatgttgctc
cctaatcaagtgtgggacagcataatccagcaggcaacaaaaaatgttgatattctaaag
gatcctgaaacagttaaacagctgggtagcattctgaaaacaaatgtaagagcatgtaaa
gctgtcggacacccctttgtgatacagcttggaagaatttatttagatatgctgaatgtg
tacaagtgcctaagtgaaaatatttccgcagctattcaggctaatggtgaaatggttact
aaacaacctctgattagaagtatgaggacagtaaaaagggaaactctaaaactaatttct
ggttgggtgagcaggtccaacgatcctcagatggtagctgaaaactttgttcctcctttg
ttggatgcagttctcattgattaccagagaaatgttccagctgctagagaacctgaagta
ctcagtacaatggctatcattgtaaataaattggggggacacattactgctgaaatacct
cagatatttgatgctgtttttgaatgcacgttaaatatgatcaataaggactttgaagag
tatcctgaacatagaacaaactttttcttgctactccaagcagtaaattctcattgcttt
ccagcattcctggccattccacctgcacagttcaaacttgttttggattctattatttgg
gctttcaaacacacaatgagaaatgttgcggatacaggtcttcagatactttatactcta
ttacaaaatgttgcgcaagaagaggctgctgctcagagtttttatcagacttatttctgt
gacattcttcagcatattttttctgttgtaacagacacttcacatactgctggtttgaca
atgcatgcatcaattcttgcatacatgttcaatttagtagaagaaggaaaaataagtaca
cctttaaaccctggcaatccattgaacaaccaaatgtttattcaggagtatgttgctaat
cttcttaaatctgcatttcctcacctgcaagatgcacaggttaagctatttgtaacagga
ctcttcagtttaaatcaggatattcctgccttcaaggaacaccttagggatttcctggtc
caaattaaggaatttgcaggtgaagacacatccgatttattcctggaagaaagagaaaca
gcccttcgacaggctcaggaggagaaacataagcttcagatgtctgtccctggcatcctt
aatccacatgaaattcctgaggaaatgtgtgattaa
DBGET
integrated database retrieval system
