Trachemys scripta elegans (red-eared slider): 117874328
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Entry
117874328 CDS
T07347
Symbol
RPS27A
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03010
Ribosome
tst04120
Ubiquitin mediated proteolysis
tst04137
Mitophagy - animal
tst04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
117874328 (RPS27A)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117874328 (RPS27A)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117874328 (RPS27A)
04137 Mitophagy - animal
117874328 (RPS27A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
tst03011
]
117874328 (RPS27A)
04121 Ubiquitin system [BR:
tst04121
]
117874328 (RPS27A)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tst04147
]
117874328 (RPS27A)
Ribosome [BR:
tst03011
]
Ribosomal proteins
Eukaryotes
Small subunit
117874328 (RPS27A)
Archaea
117874328 (RPS27A)
Ubiquitin system [BR:
tst04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
117874328 (RPS27A)
Exosome [BR:
tst04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117874328 (RPS27A)
Exosomal proteins of colorectal cancer cells
117874328 (RPS27A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Dsc3_N
IBR
TBK1_ULD
OTU1_UBXL
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
117874328
NCBI-ProteinID:
XP_034620206
LinkDB
All DBs
Position
3:complement(25511376..25516629)
Genome browser
AA seq
156 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRE
CPSEECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaagaccctgaccgggaaaaccatcaccctcgaggttgagccttct
gatactatagaaaatgtgaaggccaagatccaggataaggaaggaattcctcctgatcaa
caacgacttatttttgctggcaagcagttggaagatggacgcacgctgtctgactacaat
attcaaaaggaatcgactcttcaccttgtgctgagacttcgtggtggtgctaagaaaaga
aagaagaagtcttacactacccccaagaagaacaagcataagagaaagaaggttaagctt
gctgtccttaaatattacaaggtggatgagaatggtaaaatcagtcgcctgcgccgagag
tgcccctctgaggaatgtggggctggagtttttatggccagtcactttgacagacattac
tgtggcaagtgctgcctgacctactgcttcaacaaaccagaagacaagtaa
DBGET
integrated database retrieval system
