Trachemys scripta elegans (red-eared slider): 117874341
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Entry
117874341 CDS
T07347
Symbol
NRXN1
Name
(RefSeq) neurexin-1 isoform X1
KO
K07377
neurexin
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117874341 (NRXN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117874341 (NRXN1)
Membrane trafficking [BR:
tst04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
117874341 (NRXN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
117874341
NCBI-ProteinID:
XP_034620234
LinkDB
All DBs
Position
3:complement(28046157..29258608)
Genome browser
AA seq
1495 aa
AA seq
DB search
MGAVLLKRGGCLLLWLALLLSCWAELGSGLEFPGAEGQWTRFPKWNACCESEMSFNMKTR
SSSGLVLYFDDEGFCDFLELILTQGGRLQLSFSIFCAEPATLLTDTPVNDNLWHTVVIHR
HFKNTTLLIDQTEAKWVEVKSKRRDMTVFSGLFLGGLPPELRSATLKLTLSSVKDREPFK
GWITDVRVNYTQASPVESQEVRLDDEQSRLCARDDVCLNGGICSVLNDQAVCDCSQTGFR
GKDCSEEDNYVEGLAHLMMGDQGKSKGKEEYIATFKGSEYFCYDLSQNPIQSSSDEITLS
FKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVK
VTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVS
NNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMKIHGVVAFKCENVATLDPITFETPESFI
SLPKWNAKKTGSISFDFRTTEPNGLILFSHGKPRHQKDAKHPQMVKVDFFAIEMLDGYLY
LLLDMGSGTIKIKALQKKVNDGEWYHVDFQRDGRSGTISVNTLRTPYTAPGESEILDLDD
DLYLGGLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEIQSTAGVKPS
CSRETAKPCLSNPCKNNGVCRDGWNRYICDCSGTGYLGRSCEREATVLSYDGSMFMKIQL
PVVMHTEAEDVSLRFRSQRAYGILMATTSRESADTLRLELDAGRVKLTVNLDCIRINCNS
SKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLMVDDQQAMTGQMAGDHTRLEFHNIETGI
ITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIADPVTFKT
KASYVALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLHYVFDLGNG
ANLIKGSSNKPLNDNQWHNVMISRDTNNLHTVKIDTKITTQSTAGARNLDLKSDLYIGGV
AKEMYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEGPSTTCQEDS
CANQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYTWPPNDRPSTRADR
LAIGFSTVQKEAVLVRVDSSTGLGDYLELHIHQGKIGVKFNVGTDDISIEEINAIINDGK
YHVVRFTRSGGNATLQVDSWPVIERYPAGNNDNERLAIARQRIPYRLGRVVDEWLLDKGR
QLTIFNSQATIKIGGKEQGHPFQGQLSGLYYNGLKVLNMAAENDANIVIEGNVRLVGEVP
SSMTTESTATAMQSEMSTSVMETTTTLATSTVRRGKTPTKEPIGQTTDDILVASAECPSD
DEDIDPCEPSSGGLANPTRAGGREYPGSAEVIRESSSTTGMVVGIVAAAALCILILLYAM
YKYRNRDEGSYHVDESRNYISNSAQSNGAVIKEKQPNSAKSSNKNKKNKDKEYYV
NT seq
4488 nt
NT seq
+upstream
nt +downstream
nt
atgggggctgtgctcctcaagcgtgggggctgtctcctgctgtggctggccctgctactg
agctgctgggctgagcttggcagtggtctggagttcccaggggctgagggccaatggacc
cgctttcccaagtggaatgcctgctgtgagagtgaaatgagcttcaatatgaagacacgc
agctccagtgggttggtcctctattttgacgatgaggggttctgtgacttcctggagctg
atcttgacccaaggggggaggcttcagctcagcttctctatcttctgtgctgagcctgcc
accctgctgactgacacacctgtcaatgacaacctctggcacacagtggtcatccaccgc
cattttaagaacacgacactgctcattgaccagaccgaggcaaagtgggtggaagtgaag
tccaagcggcgtgacatgactgtcttcagtggcctcttcttgggtgggctcccacccgag
ctgcgctcagcaaccctgaaactgacgctttcctcggtgaaggatcgggagcccttcaag
ggctggataactgatgtcagggtcaactatacacaggcctcacctgtggagagtcaggag
gtgcggctggatgatgagcagagccgcctgtgcgccagggatgatgtttgcctcaacggt
ggcatctgctcggtgctcaatgaccaggctgtctgtgactgctcacaaaccggctttcgg
gggaaggactgcagtgaagaagacaactatgtggaaggtctggcgcacctgatgatgggc
gaccaaggtaaaagtaaaggaaaagaagaatatattgcaacattcaagggatcggaatat
ttctgctatgatttgtcccagaaccccatacagagcagcagtgatgaaataactctgtca
tttaaaacacttcagaggaatggactgatgcttcatacaggaaaatcagctgattatgtc
aatcttgcactgaaaaatggagctgtctcgttggtcattaatttgggctcaggggccttt
gaagcactggtggaacctgtgaatggaaaatttaatgacaatgcctggcatgatgtgaaa
gtaaccaggaatctgcgtcagcactcaggcattggacacgctatggtgacaatatcagtg
gatggaattctgactactacgggctacacgcaagaagactacaccatgctgggttctgat
gactttttctatgttggtggcagtcctagcacagcagacctaccagggtcaccagtcagt
aacaactttatgggctgtctcaaagaggttgtatataaaaataacgatgtcagactggag
ttatctcgacttgccaagcaaggagaccctaaaatgaagattcatggagttgtagcattt
aaatgtgagaatgttgcaaccttggatccaatcacatttgaaacaccagagtctttcatc
tctttgccaaagtggaatgccaagaaaacagggtcaatatcatttgactttcgcacaact
gagccaaatggactgattcttttcagtcatggaaaaccaaggcatcagaaagatgccaaa
cacccacaaatggtaaaggttgacttttttgccattgagatgcttgatggttacctttac
ctgctgttagacatgggatcgggtactattaaaataaaagccttgcaaaagaaggtgaat
gatggagagtggtaccatgtggactttcagcgggatggacggtcaggtaccatttctgtg
aacacgttacgtacaccttacactgcaccaggagaaagcgaaatcctagacctagatgat
gacttgtatcttgggggcttgccagaaaataaagcagggctggtctttccaacagaggtg
tggacagcacttctcaattacggatatgttggctgcatcagagacttgtttattgatggc
caaagcaaggatattcgacaaatggctgaaattcaaagcactgctggagtgaaaccctca
tgctcaagagaaactgcaaaaccatgcctgagcaacccctgtaaaaacaatggtgtatgc
agggatgggtggaacagatatatctgtgattgttctggtacaggctaccttggcagatca
tgtgagagagaggcaacagttttaagctatgacggaagtatgtttatgaagatacagctc
cctgttgtgatgcatacagaggcagaagatgtgtccttacggttcaggtctcagcgagct
tatggcattttaatggcaactacttctagggaatctgcagatacacttcgtttagagctg
gatgcaggacgagttaaactaacggtcaacctagactgtatcaggattaactgtaattcc
agcaaaggtccagaaaccctttttgctggctataacctcaatgataatgagtggcacacg
gtacgtgtggttcgtcgaggaaaaagtttaaagttaatggtggatgaccaacaagctatg
acaggtcaaatggctggtgatcacacgagactggaattccataacatagagacaggaata
ataacagaacgccgctacctgtcctctgttccctctaatttcattggacatctgcagagt
ctcacatttaacggcatggcatacattgacctatgtaaaaatggagacattgattattgt
gagctaaatgccagatttggtttcaggaatatcatagcagatcctgtcacctttaaaaca
aaagcaagctatgttgcactggctacactacaagcctacacatctatgcacctttttttc
cagttcaaaacaacatcactggatggactgatactctataacagtggagatggaaatgat
ttcattgtagttgaattagttaaagggtatttacattatgtgtttgatttgggaaatggt
gcaaatctcatcaaaggaagttctaataaacctctgaatgacaatcagtggcacaatgtg
atgatatcgcgggataccaataatcttcatactgtgaagattgacactaaaatcacaaca
caaagcacagcaggagccagaaacttagacctcaaaagtgatttgtatattggaggagtg
gcgaaagaaatgtataaatccttaccaaaactagtgcatgcaaaggagggatttcaaggt
tgccttgcatcagttgacttaaatggacgtctgcctgatctgatctcggatgccctgttt
tgcaacggacaaatagaaagaggatgtgaaggccccagcaccacatgccaagaggattcg
tgtgcaaaccaaggagtgtgcttgcagcagtgggatggattcagctgtgactgcagtatg
acctcctttagtggaccattgtgcaatgacccgggaacaacatatatctttagcaaaggt
ggtggacaaatcacatacacgtggcctcctaatgatcggccaagcactcgtgctgacaga
ctggcaatagggtttagcactgttcaaaaagaagcagttttggtacgagtagacagttct
actgggctcggagattatttagagctgcatattcaccagggaaaaattggagttaagttt
aatgttggaactgatgacatctctatcgaagagatcaacgcaatcattaatgatggaaaa
taccatgtagtacgttttacaagaagtggtggcaatgccacattacaggtggacagctgg
ccagttatagaacgttacccggcaggaaacaatgataacgagcgcctggcgattgctaga
cagcgaattccatatcgacttggtcgagtagttgatgaatggctactcgacaaagggcgt
cagcttacaatcttcaatagccaagcaaccataaaaattggaggcaaggaacagggtcat
ccattccaaggccagctctctggtctttactacaatggcttgaaagttctgaatatggca
gctgaaaatgatgctaacatcgtgatagaaggaaatgtgagacttgttggtgaagtgcct
tcttctatgacaactgaatcaacagccacagcaatgcagtctgagatgtccacgtcagtt
atggaaactaccaccactttggccacgagcactgtcagaagaggaaagacccctacaaaa
gaacctattggtcagaccacagatgacatcctggtggcctcggctgaatgtcccagtgat
gacgaggatattgatccctgtgagccgagctcaggtgggttagcaaatcctaccagagca
ggaggaagagaatacccaggctcagctgaagtaattcgagaatccagcagcacaacaggc
atggtggttggaatcgttgcagcagcggcactgtgtatcctaatccttctttatgccatg
tacaagtacagaaacagagatgaaggctcgtaccatgtagatgagagtcgaaactacatc
agtaactcagcacagtccaatggggctgtgattaaggaaaaacagcccaacagtgctaaa
agttccaacaagaacaagaaaaataaggataaggaatactatgtctga
DBGET
integrated database retrieval system
