Trachemys scripta elegans (red-eared slider): 117874342
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Entry
117874342 CDS
T07347
Symbol
RBM17
Name
(RefSeq) splicing factor 45 isoform X1
KO
K12840
splicing factor 45
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117874342 (RBM17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tst03041
]
117874342 (RBM17)
Spliceosome [BR:
tst03041
]
Complex A
U2 snRNP components
U2 related factors
117874342 (RBM17)
Complex B
117874342 (RBM17)
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Gene cluster
GFIT
Motif
Pfam:
G-patch
RRM_1
Motif
Other DBs
NCBI-GeneID:
117874342
NCBI-ProteinID:
XP_034620239
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All DBs
Position
1:9804754..9825533
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AA seq
443 aa
AA seq
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MMVSPDHHSVKLIKFLHTYLPGRGDTMVMKVVFSGFKQKGKMSLYDDLGVETSDSKTEGW
SKNFKLLQSQLQVKKAALTQAKSQRTKQTTVLAPVIDLKRGSSSDDRQIVDTPPHVAAGL
KDPVPSGFSAGDVLIPLADEYDPVFPNDYEKVVKRQREERQRQRELERQKEIEEREKRRK
DRHEASGFSRRPDPDSDEDEDYERERRKRSMGGAAIAPPTSLVEKDKEPVPSFPFEEESR
PRAPSAKAAIPPPVYDEPERPRSPTGPSNSFLANMGGTVAHKIMQKYGFREGQGLGKHEQ
GLSTALSVEKTSKRGGKIIVGDAADKVDASKKSDSNPLTEILKCPTKVVLLRNMVGAGEV
DEDLEGETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFG
GRVVKACFYNLDKFRVLDLAELV
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgatggtcagtcctgaccatcattcagtgaagttaataaagtttttgcacacatactta
cctggcagaggagataccatggtcatgaaggtggttttctcaggttttaaacagaagggg
aaaatgtcactttatgatgacctgggagtggaaaccagcgattcgaaaacagaaggctgg
tccaaaaatttcaaactactgcagtctcagttgcaggtgaagaaggcggctctcactcaa
gcaaagagtcagaggacaaaacaaacgacagtccttgctccagtgattgacctgaagcga
gggagctcttctgatgacagacagattgtagacacaccacctcatgtagctgctggctta
aaggatcccgtacctagtgggttttctgcaggagatgtgctgattcctttggctgatgaa
tatgatcctgtgtttcccaatgattatgagaaagtagtaaaacgccagagggaggaacga
caaagacagcgtgagctggagaggcaaaaagagattgaagaaagagaaaagagacgtaaa
gaccggcatgaagccagcgggttttcaagaagaccagatccagattctgatgaagatgaa
gattatgagagagagaggaggaaaagaagcatgggaggtgctgccatcgcaccaccgacg
tctcttgttgagaaggacaaagaacctgtaccatcttttccatttgaagaggagtcaaga
cctcgtgcaccatctgccaaagcagctattcctcccccggtatatgatgagccagaaaga
ccgcggtccccaaccgggcctagtaattctttccttgctaacatgggaggcaccgtcgct
cataaaatcatgcagaagtatggtttccgagagggccaagggctggggaagcacgaacaa
gggctaagcacagcactgtcagtagagaaaacaagcaagagaggtggaaagatcattgtt
ggtgatgctgcagataaagtcgatgcatccaagaaatccgattcgaatccattaacagag
atactaaagtgcccaacgaaagtggtcttactaaggaacatggtaggtgctggagaggtt
gatgaagatctagaaggtgaaactaaagaagaatgtgaaaaatatggcaaggttgggaaa
tgtgtcatctttgagattcctggtgcccctgatgatgaagcagtgagaatatttttagag
tttgagagggtcgaatcagcaattaaagctgtggtggatctgaatggaagatactttggt
ggacgagtggtgaaggcttgtttctacaacctggataagttcagagtactggacctggca
gagctagtctga
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