Trachemys scripta elegans (red-eared slider): 117874351
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Entry
117874351 CDS
T07347
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04517
IgSF CAM signaling
tst04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117874351 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117874351 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tst04812
]
117874351 (SPTBN1)
Cytoskeleton proteins [BR:
tst04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117874351 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
117874351 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
117874351
NCBI-ProteinID:
XP_034620287
LinkDB
All DBs
Position
3:32009678..32206188
Genome browser
AA seq
2361 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYADLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERQARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSIVRLLSKHKAFEDEMSGRSGNFQQAIKEGEGMIAEEHFGSEKIRERIK
DMREQWANLEELSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIANYRPTIDSLHEQAKALPQEHAESPDVQGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALISALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLTGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIRKQEDFMTTMDANEEKLNAVVETGRRLFSDGNINSDKIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLEKIEKEGMQLIAEKPETETVVKEKLTGLHQMWEELESTTQTKAQRLFDAN
KAELFTQSCADLDKWLNSLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEVEELQ
SQAQALSQEGKSTDEVDGKRLIVQKKFLELLEPLTERKTNLLASKEVHQFNRDVEDEILW
VGERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITDSSLNAE
ALQQRLADLQQLWNLLIEETEKRHKRLEESHKAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYA
GLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDSVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVEALQRMHTTFEHDIQALGTQVR
QLQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVR
DLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK
HYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLS
SREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRQPP
SPEPSPKGPEDADSQQWDGTKGEQVSQNGLPSDQESPRVAETVETNEMVNGAAEQRTSSK
ESSPVPSPTADRKAKTAIQAQTAATLPAKTQETPSAQMEGILHRKHEWETHNKKASNRSW
HNVYCVINNQEMGFYKDSKAAASGIPYHSEIPISLKEAICEIAVDYKKKKHVFKLRLTDG
NEYLFQAKDDEEMNTWIQAITSAISSDKIELSPSTQSTPASSRAQTLPASVTITSESSPG
KREKDKEKDKEKRFSLFGKKK
NT seq
7086 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaacagtagcgacagactatgacaatattgaaatccaacagcaatacagtgat
gtgaataaccgctgggatgtcgatgactgggacaatgaaaatagttctgcacgactgttt
gagcgatcccgtattaaggctctagctgatgaacgagaggcagttcagaagaagactttc
acaaagtgggttaattcacatttggcacgtgtatcatgtagaattacagatttatacgct
gatcttcgtgatggacggatgcttatcaaactgctggaagttctttcaggagaaagactt
cccaaaccaaccaagggaaggatgcgcatccattgtttggagaatgttgataaagccctc
cagtttctgaaagaacaaagagtgcatctagaaaacatgggatcccatgatattgtggat
gggaatcacaggctgactcttggccttatttggaccattattctgagattccagatccaa
gatatcagtgtcgaaactgaagacaacaaagagaagaaatctgctaaggatgctttgctc
ctgtggtgccagatgaagacagctggttatcccaatgtcaacattcacaactttacaact
agctggagggatgggatggctttcaacgcactaatccataaacacaggcctgatctgatt
gattttgacaagctgaagaaatcaaatgcacactacaatctgcagaatgcttttaacctg
gcagagcaacatcttggtctcactaagcttctggacccagaggatatcagtgttgaccat
cctgatgaaaagtcaattatcacctatgtggtgacatattaccactacttttctaagatg
aaagcgttagctgttgaaggaaaacgtattggaaaggtgcttgacaatgctattgaaaca
gagaaaatgattgaaaaatatgaatcgctggcttctgaccttcttgagtggattgaacaa
actattatcatcctgaacaatcgcaaatttgccaactcgctggttggtgtgcaacagcag
ctacaggcattcaacacttaccgcacagtggagaaaccacccaaatttacagaaaaagga
aacttagaagtactgcttttcaccatccaaagcaaaatgagggctaacaatcagaaagtg
tacatgccacgggagggcaaactcatctcggacattaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcgaaatgagctcataagacaagagaaactg
gaacaacttgcacgcagatttgatcgcaaggcagctatgagagaaacatggctgagtgaa
aatcaacgactggtttctcaggataactttggttttgaccttccagccgtggaggctgcc
actaaaaagcacgaggccattgaaacagacattgcagcatatgaagaacgagttcaggca
gtagttgctgttgcaaaggaacttgagaccgagaattatcatgatatcaaacgcatcacc
gcaagaaaagacaatgttatacgcctgtgggagtatctgctggagctactcagggcacgt
agacaaagactggagatgaaccttggtctgcaaaagatattccaggaaatgctttacatt
atggactggatggatgaaatgaaggtgcttctgctatctcaagactatggcaagcatttg
ttaggggtagaggacctgttacagaaacatgcgctagtggaggcagacattgccattcag
gctgaacgagtgcggggagtcaatgcatctgctcagaaatttgccacagatggagaaggt
tacaaaccatgtgatccacaagtgatcagagatcgtgtagctcatatggagttttgttac
caagagctgtgccagttagcagccgaacgccaagctcgcttggaagaatccaggcgtctg
tggaaattcttctgggaaatggcagaagaagagggctggatcagagaaaaggagcagatc
ttgtcatctgatgactatgggaaggacctaactagcattgtccgtctcttgagcaagcat
aaggcgtttgaagatgaaatgagtggccgtagtggcaacttccagcaggcaataaaagaa
ggtgaaggtatgattgctgaggagcactttgggtctgaaaaaattagagagagaataaag
gatatgcgagagcaatgggctaacctggaggagctgtctgccattaggaagaaacgcctg
gaggaagcctctcttcttcatcagttccaagctgatgctgatgatattgatgcatggatg
ttggacatcctcaaaattgtctccagcaatgatgttggccatgatgagtattctactcag
tccttggtcaagaaacacaaagatgttgctgaagagattgcaaactataggccaaccatt
gactcactgcatgaacaagcaaaagctctgcctcaggaacatgccgaatctccagatgtt
caaggcaggttgtctggaatagaggaaagatacaaagaggttgctgaactgacacggctc
cgtaaacaggctctgcaagatacccttgctctgtataagatgttcagtgaagcagatgct
tgtgaactttggatcgatgaaaaggagcagtggcttaacaatatgcagattccagagaag
cttgaagatctggaagtgatccaacacagatttgaaagcttagaaccagaaatgaacaat
caggcatcccgtgttgcagtggtaaatcaaattgctagacagctgatgcacagtggtcat
ccaagtgaaaaggagatcaaggctcagcaagacaaactcaacacaaggtggagccagttc
agagaactggtggacagaaagaaagatgctcttatctctgctctaagtatccagaattac
catcttgagtgtaatgaaaccaaatcctggatcagagaaaagaccaaagtaattgaatcc
acacaagatctgggcaatgatctgactggagtaatggctcttcagaggaagttgacgggt
atggaacgtgatttggtagccattgaggctaagctaagtgacctgcaaaaagaggctgaa
aagttggaatctgaacatcctgaccaggctcaggccatcctgtcgaggcttgcagaaatc
agcgatgtgtgggaagaaatgaaaaccaccctcaagaaccgggaagaatcccttggagag
gcaagcaaactacagcagtttttgcgtgacctggatgacttccagtcctggctatccaga
acccagactgcgattgcctcagaagatatgccaaacacactgacagaggctgaaaagctg
ctcactcagcatgagaatattaagaacgaaattaacaattatgaggaagactaccagaaa
atgagagacatgggcgagatggtaacccaaggacaaactgatgcacagtatatgttctta
cgccagcgcctgcaggctttggacactgggtggaatgagcttcacaaaatgtgggagaat
aggcaaaacctcctttcacagtctcatgcctaccagctatttctcagagacactaagcaa
gctgaagcatttcttaataaccaggaatatgttttggcccatactgaaatgcccactacc
ttggaaggagcggaagctgctattagaaaacaggaggatttcatgaccacaatggatgcc
aatgaggaaaagctcaatgcagttgtagaaactggcaggaggctctttagcgatgggaat
attaactctgacaagatccaagagaaagtggactctattgatgacagacataggaagaat
cgtgaggcagccagtgagcttctgatgaggttgaaagacaacagagatcttcaaaagttt
cttcaggactgccaggagctgtcactctggatcaatgagaagatgctcacagcccaggat
atgtcttatgacgaagcaaggaatctgcacagtaaatggctaaaacaccaggcatttatg
gcagaacttgcatccaacaaagaatggctggagaaaattgaaaaggaagggatgcagctc
attgcagagaaaccagagactgaaaccgtagtgaaagaaaagctgacaggcctgcatcaa
atgtgggaagagctggaatctactacccaaaccaaggctcagcgactctttgatgcgaat
aaggctgagcttttcacacagagttgtgctgatttggataaatggctgaacagcttggag
agtcagatacagtctgatgactatggaaaagatctcaccagtgtcaacatcctgttgaaa
aaacaacagatgcttgagaaccaaatggatgttcgtaagaaggaggtagaggagctgcaa
agccaggcccaggctttgagtcaggagggcaagagtactgatgaggtagatggcaaacgc
cttattgtacagaagaaatttttggagctactggaacccttgactgaaaggaagacgaat
ctgctggcctccaaagaggtccaccagttcaaccgggatgtggaggatgaaattctgtgg
gttggagagaggatgcctatagcaacatctacagatcatggacataacctccagactgtg
cagctactgataaagaaaaatcagacacttcagaaggaaatccaaggacatcagcctcgt
atcgatgacatttttgagaggagccaaaacattattacagacagcagccttaatgctgaa
gcgcttcagcagagacttgcagacttgcaacagctgtggaatctcctaattgaggagaca
gagaaacgccacaaacgcctggaggagtctcacaaagcacagcagtattacttcgatgct
gcagaggctgaggcgtggatgagtgagcaggaactctatatgatgtcagaagagaaagcc
aaggatgaacagagtgcagtgtccatgctgaagaaacaccagattttggaacaagcagta
gaagactatgctgagacagtgcaccagctttccaagactagcagaactttggttgcagac
aatcatccggaaagtgagcgcatcagtatgcgccagtccaaggtggataagctatatgca
ggcctgaaggatctagctgaagagaggaggggcaaactagatgagagacacaggctattc
cagctcaatcgtgaggtggatgacttggagcagtggattgctgaaagggaagtggtggca
ggatcccacgagctgggacaggattatgaacatgttacaatgttacaagagcgattccgc
gaatttgcccgagacactggaaacattggacaggagcgtgttgattctgttaaccacatg
gcagatgagctcatcaattctggacactctgatgcagccaccattgcagagtggaaggat
ggtctcaatgaggcatgggctgacctcttggagctcattgacacaagaacacagattcta
gcagcctcctatgaactacacaaattttaccatgatgccaaggagatctttggacgtatt
caagataaacacaagaaattgcctgaggaacttggtagagaccaaaacacagtggaagca
ctgcagaggatgcacacaacatttgaacatgatattcaggctttaggcacccaggtgaga
cagctgcaagaggacgctgcacgccttcaggctgcctatgctggggacaaggctgacgac
atccagaagcgagagaacgaggtcctggaagcatggaaagcattgctggacgcctgcgag
ggacgcagagttagactggtggatacaggagataaatttcgtttcttcagcatggttcgt
gatctcatgctctggatggaagatgttatccggcagatcgaagcccaagagaagccaagg
gatgtttcatcggttgaattactaatgaacaatcaccagggtatcaaagcagaaattgac
gcccgtaatgacagctttactacgtgcattgagcttggcaaatctcttctggcaaggaaa
cactatgcatcagaggagatcaaggaaaagttattgcagttgacagagaagagaaaagaa
atgattgacaaatgggaagacagatgggaatggctgagactgattctggaagtacatcag
ttctcaagggatgctagtgtagctgaggcctggctgctgggacaggagccatacctatcc
agtcgtgagataggtcaaagtgtggatgaagtggaaaagttaattaagcggcatgaagcg
tttgaaaaatctgcagctacttgggatgaaagattttcagcactggaaagactgactaca
ctggaattactggaagtacgtcgacagcaagaggaagaggaaagaaagaggcagcctcct
tccccagagccaagcccaaagggtccagaagatgcagattcacaacaatgggatggtaca
aaaggagaacaggtttcccaaaatggtttaccatcagaccaggagtctccacgggtggcg
gaaactgtggaaacaaatgaaatggtcaatggagctgcagaacagaggacaagttcaaaa
gagtctagtcctgttccttccccaactgcagaccgcaaagccaagaccgccattcaggct
cagactgcggctaccctaccagccaaaacacaagagactccttcagctcaaatggagggc
attttgcatcgtaaacatgagtgggagacacataacaagaaagcctcaaacagatcctgg
cacaacgtgtactgtgttataaacaaccaagagatgggcttctacaaagattccaaggct
gctgcttctggcattccctaccacagtgagatccccatcagcttgaaagaagcaatctgt
gaaatagcggttgattacaaaaagaagaaacacgtgttcaagctaagattaactgatggc
aatgagtacctcttccaagccaaagatgatgaggaaatgaacacatggattcaggccatt
acatcagctatctcctctgacaaaatcgaattgtctccaagcacacaaagcactccagct
tctagtcgtgcccaaaccctgccagccagcgttacaataaccagcgaatccagtcctggc
aagcgagagaaagacaaagaaaaggacaaagaaaagagattcagcctttttggcaaaaag
aagtga
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integrated database retrieval system
