Trachemys scripta elegans (red-eared slider): 117874480
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Entry
117874480 CDS
T07347
Symbol
TAF1A
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A isoform X1
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tst03021
]
117874480 (TAF1A)
Transcription machinery [BR:
tst03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
117874480 (TAF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1_subA
COG4_N
Phi-29_GP3
Motif
Other DBs
NCBI-GeneID:
117874480
NCBI-ProteinID:
XP_034620520
LinkDB
All DBs
Position
3:complement(48732956..48762238)
Genome browser
AA seq
469 aa
AA seq
DB search
MDSFVEQLKRGTEEEFTEESAWDGSVVNTTSSSLPTVYLPLLPRYLWHPTTRGRKATEFQ
ETKKACLNYIQDALLQHQWQRAAEFMTNYLETLESTSAEKRMAAPEVIWRIGTEILCHHP
KSSIEEFNYFAERMKNLGVKRYLKVCLEHVFHLLCNGLIDDAYQNLSLAEGWRYGEQTVA
QDKELKLIQAYKGLLDYYNWAKKRKAMLELDGNFADSVEQEMHSFFRQAAVNLKEIIKIP
GVWDPFVKCYVDLLEFYEDYDEVRQVLSEYAYNSKFPPNPNAHVYYYQFLKRQGESKKTL
KSVLKILHEIVPSHELMLEYNAMLQKSKKRKNHRLGLEIIFTLLDFAGWKEHIKAWSCLA
KQIKQILENSSKHLDWVTEEWNSRKDWWPAFHFSHYLAKRNWQENESLACEKALVAGILL
GKDCKYFKYVSHQGCKAKKEKFRTMKKFVKKHSSTHLSVSGVLDSCTHL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggacagttttgttgaacaactgaaaagggggacagaggaagagtttacagaagagtct
gcgtgggatgggtctgtggtaaacaccacaagcagttcacttccaactgtctatttacct
ttactcccacggtacctttggcatccaacaaccagaggtcgaaaggcaacagaatttcag
gagactaagaaagcttgtttaaattacattcaggatgccctgctacaacaccagtggcag
agggctgcagaattcatgactaactatttggagacattagagagtacttctgctgaaaaa
cggatggctgccccagaggtgatttggagaataggaactgaaattttgtgccatcatccc
aagagcagcattgaagagttcaactattttgctgagcggatgaaaaatctaggagtaaaa
aggtatttaaaggtttgtttagagcatgtctttcacctcctgtgtaatggactgatagat
gatgcataccaaaacctgtccctggcagaaggctggaggtatggagaacaaacagttgct
caggataaagaattgaaactcattcaagcttacaagggactgctggactactataactgg
gccaaaaaaagaaaagccatgttggagcttgatggtaattttgcagactctgttgaacag
gaaatgcacagtttctttcgacaggcagcagtgaatctcaaggagataattaaaatacct
ggagtttgggacccttttgtgaagtgctatgtggacctattggaattctatgaggattat
gatgaagtccggcaggtgttaagcgagtatgcttacaattcgaagtttcctcccaatccc
aatgctcatgtttattactatcagttcctaaagagacagggtgaatcaaagaagacactg
aagtctgtgctcaagattttgcacgagattgttccctctcatgaattaatgttagaatat
aatgccatgcttcaaaaatcaaaaaaaagaaaaaatcacagactagggctggagattatt
ttcacactcctggattttgctgggtggaaggagcatataaaagcttggagctgtttagca
aaacagattaaacagatcctggagaactctagcaagcatcttgactgggtcacggaggag
tggaactccagaaaggactggtggccagccttccactttagccactacttggcgaaaaga
aattggcaggaaaatgaaagtcttgcttgtgaaaaagcattggtggctggaatcttgttg
ggaaaagattgcaaatattttaaatatgtttcacaccaaggctgcaaagccaagaaggaa
aagtttcggacaatgaagaaatttgtgaagaaacacagctctacccatttgagtgtatct
ggtgttttggattcctgcacgcacctttga
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