Trachemys scripta elegans (red-eared slider): 117874516
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Entry
117874516 CDS
T07347
Symbol
PARP1
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03410
Base excision repair
tst04210
Apoptosis
tst04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117874516 (PARP1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117874516 (PARP1)
04217 Necroptosis
117874516 (PARP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tst03032
]
117874516 (PARP1)
03036 Chromosome and associated proteins [BR:
tst03036
]
117874516 (PARP1)
03400 DNA repair and recombination proteins [BR:
tst03400
]
117874516 (PARP1)
Enzymes [BR:
tst01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
117874516 (PARP1)
DNA replication proteins [BR:
tst03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
117874516 (PARP1)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
117874516 (PARP1)
DNA repair and recombination proteins [BR:
tst03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
117874516 (PARP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
DUF948
ESF1
Motif
Other DBs
NCBI-GeneID:
117874516
NCBI-ProteinID:
XP_034620598
LinkDB
All DBs
Position
3:complement(51260590..51322970)
Genome browser
AA seq
1011 aa
AA seq
DB search
MAEPADKLYRAEYAKSGRASCKKCGESIAKDSLRLAIMVQSPMFDGKVPHWHHYTCFWKR
ARLVSHADVDGFPELRWEDQEKIKKAIETGGVAAGKGTDQEGSGKAEKSLNDFAAEYAKS
NRSTCKGCEQKIEKGQIRISKKMVHPEKPQLGMIDNWYHPDCFVSHRAELGFLPAFGASQ
LQGFGMLKAEDKEALKKQLPAMKSEGKRKGDEVDGNVTSKKKQKKEKDRESKQEKLLKEQ
TELIWSIKDELRKVCSTNDLKELLIANKQEVPSGESAILDRVADGMAFGALLPCEECKGQ
FVFKSDAYYCSGDITAWTKCVAKTQTPNRKEWIIPKEFREISYLKKFKCKKQDRAFPPEA
VAVNAVLPAAASAPLTEKASVPADKPLSSMKILTLGKLSRNKEEVKAMIEDLGGKVTGTA
NKATLCISTQKEVEKMTKKMEEVKEAKVRVVSEEFLQDVKSSHKGFQELLSLHALSPWGA
EVKQEHTETSLGGKSSGLPNMKSAGKVKEEQGTSKSEKKMKLTVKGGAAVDPDSGLEDSA
HVFEKSGKIFSATLGLVDIVRGTNSYYKLQLLEDDREIRYWVFRSWGRVGTAIGSNKLEQ
MPSKDDAIEHFLNLYEEKTGNSWHSKNFTKYPKKFYPLEIDYGQDEEAVRKLTVSAGTKS
KLPKPVQDLIKMIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYSILNEVQQAVSDG
GSDSQILDLSNRFYTLIPHDFGMKKPPLLNNLDHIQAKVEMLDNLLDIEVAYSLLRGGNE
DGDKDPIDINYEKLKTNIKVIDKDSEEAKIIKQYVKNTHASTHNAYDLKVVDIFKIEREG
ENQRYKPFRQLHNRQLLWHGSRATNFAGIFSQGLRIAPPEAPVTGYMFGKGIYFADMVSK
SANYCHTSQTDPIGLILLGEVALGNMHELKNASHITKLPKGKHSVKGLGKTAPDPTATIT
LDGVDIPLGNGIPSGVSDTCLLYNEYIVYDVAQVNLKYLLKLKFNYKTSLW
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggcggagccggcggacaagctgtaccgggccgagtacgccaagagcggccgggcctcg
tgcaagaaatgcggggagagcatcgccaaggactcgctgcgcctggccatcatggtgcag
tcacccatgttcgatggtaaagtcccccactggcatcattatacttgtttctggaagcgg
gcccgacttgtgtcccatgcagatgttgatggcttccctgagctccgatgggaagatcag
gagaaaatcaaaaaagcaattgaaactggaggagtcgcagcaggtaaagggactgaccag
gagggaagtggcaaggctgagaagagtttaaatgacttcgctgcagaatatgccaagtct
aacagaagtacctgcaaaggttgtgaacagaaaatagaaaagggccagatcagaatttcc
aagaagatggtgcatcctgaaaagccccagctgggaatgatagataattggtaccatcct
gactgctttgtgagccaccgagcagaactgggctttctccctgcatttggagccagtcag
ctccagggctttgggatgttgaaagcagaagataaagaagctctgaaaaagcagctgcct
gccatgaagagtgaaggaaagagaaaaggagatgaggtggatggaaatgtgacctcaaaa
aagaaacagaaaaaagaaaaagacagagaatccaagcaggagaagctgttgaaggagcag
acagagttgatttggagcatcaaagatgagctgaggaaagtctgttccactaacgacctg
aaagagctgctgatagccaacaaacaggaagtgccttctggggaatctgctatcttggac
cgagtagcagatgggatggcattcggagctctgcttccctgtgaggagtgcaaggggcag
tttgtgttcaagagtgatgcatactactgctcaggggacatcactgcctggactaaatgt
gttgccaaaacacagacccccaacaggaaggaatggataatcccaaaggagttccgggaa
atctcctacctgaagaaatttaagtgtaaaaagcaagacagagcattccctccagaggct
gtggctgtgaacgcagtgcttccagcagcagcttctgctcctttgacagagaaggcgtct
gtgccagcagataagccattatccagcatgaagattttgactcttggaaaattatccagg
aacaaggaagaagtgaaggctatgattgaggacctgggcggaaaggtgacagggacagcg
aacaaggctaccctgtgcatcagcacacaaaaggaagttgagaaaatgaccaagaagatg
gaagaagtgaaggaggccaaagtccgggtggtctcagaggagtttctgcaggacgtgaaa
tcctcccacaagggcttccaggagctcctgtcgctgcatgcgctctcgccttggggtgca
gaggtgaagcaggagcacacggagacatccctgggaggaaagtccagcgggctcccaaat
atgaagagtgctgggaaggtcaaggaagaacaaggaaccagcaagtctgaaaagaaaatg
aagttaacagttaaaggaggagcagcagtggatcctgattcaggtttggaggactctgct
catgtctttgaaaagagtggtaaaatcttcagtgccacgctcggcctggtagatatcgtc
agaggaaccaattcctattacaaactgcagctactggaggatgacagagagatcaggtat
tgggttttcagatcttggggtcgtgttggcactgcgattgggagtaacaaactggagcag
atgccatctaaagatgatgccattgagcacttcttgaatttgtatgaagagaaaacgggc
aactcctggcattccaagaacttcactaaatatcccaaaaaattctaccccctggaaata
gactatggacaggatgaagaagctgtgaggaaactgacagtgagtgctgggaccaagtca
aagcttcctaagccagtccaggaccttattaagatgatctttgatgtggagagcatgaag
aaagccatggtggaatttgagattgacctccagaagatgccactgggaaagctgagcaag
aggcagatccagagtgcatactccatccttaacgaagttcagcaggcagtttctgatggt
ggcagtgattcgcagatactggatctctccaatcgcttctataccctgatacctcatgac
tttgggatgaagaaaccacctctcttaaataacctagatcatatccaggccaaagtggag
atgttagacaacctgcttgatattgaggtcgcttacagccttctcagaggtggaaatgaa
gatggggataaagacccaattgacatcaactacgaaaagctcaaaactaacattaaggtt
attgataaagattcagaagaagccaagatcataaagcagtatgtgaagaatactcatgcc
tctacccacaatgcatatgatctaaaagttgtggatatcttcaagattgaacgtgaagga
gaaaatcagcgttacaaaccgttcagacagcttcataatcgccagctgctctggcatggc
tcccgcgctaccaactttgctggcatcttctcacagggtctccgaatagctccacctgaa
gctcctgtgactggttacatgttcggtaaaggtatctattttgcggacatggtatccaag
agtgccaactactgtcacacgtctcagactgacccaataggcttaatcttactgggagag
gttgcccttggaaacatgcatgagctaaagaatgcttcccacataactaagttgcccaag
ggaaaacacagtgtcaaaggtttgggcaaaactgcaccggatcctacagccactatcact
ctagatggtgtagatattcctttagggaatgggattccatctggagttagcgatacctgt
cttctatataatgaatatattgtctatgatgttgctcaggtaaatttgaagtacctgctg
aaactgaagttcaactataagacatcactctggtga
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