Trachemys scripta elegans (red-eared slider): 117874555
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Entry
117874555 CDS
T07347
Symbol
LRFN2
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 2
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tst04515
]
117874555 (LRFN2)
04990 Domain-containing proteins not elsewhere classified [BR:
tst04990
]
117874555 (LRFN2)
Cell adhesion molecules [BR:
tst04515
]
Immunoglobulin superfamily
SALM family
117874555 (LRFN2)
Domain-containing proteins not elsewhere classified [BR:
tst04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117874555 (LRFN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
LRR_5
ig
LRR_1
fn3
Ig_2
LRR_9
Ig_C17orf99
LRRCT
Motif
Other DBs
NCBI-GeneID:
117874555
NCBI-ProteinID:
XP_034620683
LinkDB
All DBs
Position
3:56257064..56311624
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AA seq
763 aa
AA seq
DB search
MEKLLCGILVFGMAVAVNACPKYCVCQNLSESLGTLCPSKGLLFVPLDIDRRTVELRLGG
NFIINISRQDFANMSGLVDLTLSRNTISYIQPYSFADLESLRSLHLDSNRLPNIGEDILR
GLINLQHLIINNNQLSSISDEAFEDFLVTLEDLDLSYNNLQGIPWESIRKMVNLHQISLD
HNLIDYITEGTFADLQKLARLDLTSNRLQKLPPDPIFARSQTSPLEATPFSPPLSLSFGG
NPLHCNCELLWLRRLDRDDDMETCASPPNLKGRYFWYVREEEFVCEPPLITQHTHKLLVL
EGQTATLKCKAIGDPSPVIHWVAPDDRLIGNSSRTAVYDNGTLDIVITTSKDYGTFTCIA
ANAAGESTATIELSIVQLPHLSNGTGRTAPPKSRLSDITSSSKSNRGETKGPPERTVLVS
EVTTTSALVKWTVSKSAPRVKMYQLQYNCSDDEVLIYRMIPATNKAFVVNNLVSGTGYDL
CVLAMWDDTATTLTATNVVGCAQFFTKEDYPQCQSMHSQFLGGTMILVIGGIIVATLLVF
IVILMVRYKVCNNSQGKMANVSNVYSQTNGAQPVQNGVLPQVNPKVVVRNELMEFNCESV
QSSISSSSSSVNSRDCDDYSLQSEQGTLSSKWRPPSRSKHNIDRLMGAFASLELKCQKKE
DTVDSRTSTVARHSDKEPLLGQQESKFRSLLMLPLEGKTKRSHSFDMGDFATSQCCTYPK
KITHIWTKRSLSVNGMLLQYDDNDLAGAKGTYGSSEWVMESTV
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaattgctctgcggcatcctggtgtttggaatggcagttgcggtcaatgcttgt
cccaaatactgtgtgtgtcagaacctgtcagagtcgctggggactctgtgtccctccaag
ggcctcctttttgtaccattagacatagaccgaaggactgttgaactccgactcgggggt
aacttcattattaacatcagccgacaggactttgccaacatgtctggccttgttgacctc
actttgtccaggaataccatcagttacattcagccctactcctttgctgatctagaaagc
cttcggtctttgcatttggacagcaataggctgcccaacattggagaggatattttgaga
ggcttaattaaccttcagcacttgataataaataacaaccagctgagcagcatctcggac
gaagcctttgaggattttctggtgacattggaagacttggatctttcctacaataacctc
caaggcatcccctgggaatctataaggaagatggtaaacctgcaccagattagcttggat
cataacctgatagattatattacagaggggacgtttgcagatcttcagaaattggccaga
ttggatctaacctctaacagacttcagaagctccccccagatcccatatttgccaggtcc
caaacatctccattagaagcaactccattttctccacctctgtctcttagctttggaggc
aacccgctgcattgtaactgtgagctgctgtggttaaggcggcttgacagagatgatgat
atggaaacttgtgcttcccctccaaatctaaagggaagatacttttggtatgtacgggaa
gaggaatttgtttgtgagccacctctcattacccagcatactcacaagttgctggtttta
gaagggcaaactgccacattaaagtgtaaagccattggggacccatccccagtcattcac
tgggtggctccagatgaccgactcattgggaattcttcgaggacagcagtctacgataat
ggtactttagatatcgttatcacgacatccaaggattatggaacttttacgtgcatcgca
gccaatgctgctggagaatcaaccgcgaccattgagctctcgatcgtgcagcttccacac
ctcagcaacggtacgggccgaactgccccacccaaatccaggctttctgacatcactagc
tccagcaagtccaatagaggggaaacgaaaggtccaccagaaaggactgtcttggtgtca
gaggtgacgactacctcagctttggtcaagtggacggtgagcaagtcagcccccagggtt
aaaatgtatcagctgcaatataactgctcggatgatgaagttctaatttacaggatgatc
cctgctacaaacaaagcctttgtggtaaacaaccttgtatctggaacgggctatgacctt
tgtgtcttggccatgtgggatgacactgccacgacactcacagccaccaacgtcgtgggg
tgtgcccagttcttcaccaaagaggactatcctcagtgccaatccatgcacagccagttt
ctgggtgggacgatgatcttagtcattggaggcatcattgtggcgactctactggtgttc
atcgtcatactcatggtccggtataaagtttgtaacaattcccaggggaagatggccaat
gtcagcaatgtctactcacagactaatggagctcaacctgttcaaaacggggtcctgccc
caagtcaaccccaaagtggtggtaagaaatgaactcatggagtttaactgcgaatctgta
cagagcagcatctcctcctcttctagttcagtgaatagccgcgactgtgatgattatagc
ctccaaagtgaacaaggcacattgtccagtaagtggaggcctccttctaggtcaaaacat
aacattgatcggctaatgggagcttttgcctccctggaactgaagtgtcaaaaaaaggag
gacacggtagactccagaacttccacagtggcccgccactcggacaaagagccgcttctg
ggccaacaggagtcaaaattccgtagtctcctcatgttaccactggaggggaaaactaaa
cgtagccattcttttgacatgggggactttgccacatctcaatgctgcacctaccccaaa
aagataacccatatttggacaaagcgcagcctctcggtgaatggcatgctcttgcagtat
gacgacaatgacttagcaggggcaaaagggacttatgggagttcagaatgggtaatggaa
agcacagtgtaa
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integrated database retrieval system
