Trachemys scripta elegans (red-eared slider): 117874596
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Entry
117874596 CDS
T07347
Symbol
XPO5
Name
(RefSeq) exportin-5 isoform X1
KO
K14289
exportin-5
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117874596 (XPO5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tst03016
]
117874596 (XPO5)
03036 Chromosome and associated proteins [BR:
tst03036
]
117874596 (XPO5)
Transfer RNA biogenesis [BR:
tst03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
117874596 (XPO5)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
117874596 (XPO5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
117874596
NCBI-ProteinID:
XP_034620764
LinkDB
All DBs
Position
3:61114321..61150871
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AA seq
1201 aa
AA seq
DB search
MSAEQVSSLCEQLVKAVTVIMDPASTQRYRLEALKFCEEFKEKCPICVPCGLKLAEKTQT
AIVRHFGLQILEHVVKFRWNSMPRLEKVYLKNNVMGLISNGTQNILEEESHIKDVLSRIV
VEMIKREWPQHWPDMLKELDTLSKQGETQTELVMFILLRLAEDVVTFQTLPTQRRRDIQQ
TLTQNMEKIFSFLLTTLQQNVNKYRRMKTDLAQEPKAQANCRVGIAALNTLAGYIDWVAM
SHITADNCKLLEMLCLLLNEPELQVGAAECLLIAVSRKGKLEDRKPLMVLFGDVAMHYIL
SAAQTADGEGLVEKHYVFLKRLCQVLCALGSQLCALVGSDSDVDTPANLGKYLDSFLAFT
THPSQFLRSSTQITWGALFRHEILSRDPLLLAMIPKYLRASMTNLVKVGFPSKTDSPSCE
YSRFDFDSDEDFNAFFNSFRAQQGEVMRMACRLDPRTGFQMAGEWLKYQLAAPVDIGPMN
SKTGEGLCSIFSPSFVQWDAMTFFSESVISQMFRTLDKEEIPVNDGIELLQLVLNFETKD
PLILSCVLTNVSALFPFVTYRPEYLPQVLSKLFTAVTFEVIEESKAPRTRAVKNVRRHAC
SSIIKMCRDYPQLVLPNFEMLYNHVKQLLSNELLLTQMEKCALMEALVLISNQFKDYQRQ
KVFLEELMSPVANLWLSEEMQRVLSDPEAFISYVGADNKIADPVLEDPSGLNRSRISFCV
YTILGVVKRARWPTTLEEAKAGGFVIGCMPSGNPIYRNPCTEQVLKLLDNLLALIRTHNN
LYMPEMVAKLGETFAKALDMLEVEKNAILGLPQPLLELYDSPVYKTILERMQGFFCTLYD
NCFHILGNAGPSMQQDFYTVDGLASQFLNSAFVNLNNIPDYRLRPMLRVFVKPLVLSCPS
EHYETLLCPMLGPLFTYLHVRLSQKWQVISQRSILCEEDTADDNPESQEMLEEQLVRLLT
REVMDLITVCCVSKKGAAEHNSSAVADGDDDEMMSTDVTPPSSAELTELGKCLMKQEDVC
TALLITAYRSLSWKDTLSCQRTTTQLCWPLLKQVLTGNLLPDAVTWFFTGVLKGLQTHGQ
HDGCMAALVHLAFQIYEALRPRYAELKAVMEQIPEIQKESLEQFDSKLLNPTLLKVADKR
RKDNFKRLIAGCIGKPLGEQFRKEVHIRNLPSLFKKVKPSLETDVLENNEDGEGLTALFE
P
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcggagcaggtgagcagcctgtgcgagcagctggtgaaggcggtgacggtgatc
atggacccggcctccacccagcgctaccgcctggaggcgctcaagttctgcgaggagttt
aaagagaagtgtcccatctgtgtcccctgtggtctgaagctggcagagaaaacccagaca
gccattgtcaggcactttggtcttcagatcttggagcatgtcgtcaagtttcgctggaac
agcatgcctcgcctcgagaaggtctatctgaagaacaacgtcatggggctcatatccaat
ggaacacagaatattttagaggaggaaagtcacattaaggatgtcctgtctcgcattgtg
gtggagatgatcaagcgtgaatggcctcagcactggcctgatatgctgaaggagctggac
acactttccaaacaaggggagacacagacagaactggtgatgttcatcctcctgcgtctg
gcagaggacgtggtgaccttccagacgctgcccacccagcggcgacgggacatccaacaa
actcttacccagaacatggagaagatcttcagcttcctgctcactaccctgcagcagaac
gtcaacaagtataggcgcatgaagactgacctggctcaggaaccaaaggcccaggcaaac
tgccgcgttgggatagcagcactgaacaccctggcaggctacattgactgggtggccatg
agccacatcacagcagataactgcaagctcctggagatgctgtgcttgctcctgaatgaa
cccgagctccaagtgggagcagcagagtgtcttctgatcgctgtcagcaggaaagggaag
ctggaggatcggaagccccttatggtcttgtttggagatgttgccatgcactacatactt
tctgctgcgcagacagcagatggtgaaggcctggtagagaagcattatgttttcttgaag
agactttgccaggtcttgtgtgctttgggcagtcagctgtgtgcattagtgggctcggat
tctgacgtggacacaccagccaaccttgggaaatacctggactcgtttctagctttcaca
acccatcccagccagttcctgcgctcttccactcagatcacctggggagccctctttcga
catgaaatcctgtcccgtgaccctctgctgttagctatgatcccaaagtaccttcgtgca
tctatgactaacctagtgaaggtgggcttcccctctaaaacagacagccctagttgtgaa
tactctcgctttgacttcgacagtgatgaggacttcaatgccttcttcaactctttccgt
gcccagcagggagaagtcatgaggatggcgtgtcgcctggacccaaggactggcttccag
atggctggggagtggctgaagtaccagctggcagctcctgttgatattggacccatgaac
tctaagactggggaaggtctctgctccatcttctctccttcctttgtacagtgggatgct
atgaccttcttctcggagagtgtcatcagtcagatgttccggacactggataaggaagag
atcccagtgaatgatggcatagagctgctgcagcttgtcctgaactttgaaacaaaggat
cctctcatcttgtcctgtgtgcttaccaatgtctctgcactcttcccttttgtcacctac
aggccagagtatctaccccaagtcctctccaagctattcaccgccgtcacttttgaagtt
atagaagagagcaaggccccaagaactcgggcagtgaagaatgtgagaagacatgcatgc
tcctcgatcataaagatgtgtcgggactaccctcagcttgtcctgcctaactttgagatg
ctgtataaccacgtgaagcagctgctgtccaatgagctgctcctgacgcagatggagaag
tgcgctctcatggaggctctggtcctcatcagcaaccagttcaaggactaccagcggcag
aaggttttcctggaggagctcatgtctcctgttgccaacctgtggctctctgaagagatg
cagagagtcctatcagatcctgaagctttcatctcctacgtgggtgctgacaacaaaatc
gctgatcccgtcttagaagatcccagtggcctgaaccgctccagaataagcttttgcgtg
tacaccattctgggagttgtgaaacgggctcgttggcccactaccctggaagaggctaag
gccggaggatttgtgatcgggtgcatgcccagcggcaatccgatctaccgtaacccctgc
actgagcaggtcctgaaacttctcgacaacttgctcgctctcataaggacccacaacaat
ctctacatgccagagatggtggctaagctgggggaaacatttgcaaaggctttagatatg
ctggaagtggagaagaatgccatcctaggcctccctcagcctctcctggagctttatgac
tctcctgtttacaaaaccatcttagaaaggatgcagggcttcttctgtaccctctatgac
aattgtttccacatcctgggtaatgccggcccatcaatgcagcaagacttctacactgtt
gacggcctcgccagccagttcctcaactcagccttcgttaacctcaacaatattcccgac
tacaggctgcgccccatgcttcgtgtgtttgtgaagcccttggttctctcctgcccctcg
gagcactacgaaacccttctctgtcccatgctcggcccgctcttcacctatctacacgtg
agactgtcccagaaatggcaggtcatcagccagcggagcatactttgcgaggaggacaca
gcagatgacaaccctgagtcccaggagatgcttgaggagcagctggtcaggttgctgacc
cgggaagtcatggatcttatcactgtttgctgtgtatcaaagaaaggcgccgctgagcat
aacagctctgctgttgcagatggagacgatgatgagatgatgtccacagacgtgacccca
ccttccagtgcagagctaactgagctgggcaagtgtttgatgaagcaggaggatgtctgc
actgctcttctgatcacggcctacagatccctctcctggaaggacaccctgtcctgccaa
agaaccaccacgcagctttgctggccattgctcaaacaggtgctcacagggaatctgctc
cctgacgcagtgacctggttcttcaccggcgtgctgaaagggttgcagacacacggacag
catgatggctgcatggcagctctcgtccacctggctttccagatctatgaggctttgcgc
ccccgctatgctgagctgaaggcagtgatggaacagatcccagaaatccagaaggaatca
ttggagcagtttgactccaagcttctaaacccaactctgctgaaagtggcagacaagcgc
cggaaggacaatttcaaacgcctcattgctggctgcatcgggaagcctctgggagaacag
ttccgcaaagaggttcacatccggaacctcccatctctcttcaaaaaggtgaagccgtcg
ctggagacagacgtactggagaacaacgaggatggagaaggcctcactgcgctctttgag
ccctga
DBGET
integrated database retrieval system
