Trachemys scripta elegans (red-eared slider): 117874683
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Entry
117874683 CDS
T07347
Symbol
HEATR1
Name
(RefSeq) HEAT repeat-containing protein 1 isoform X1
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117874683 (HEATR1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tst03009
]
117874683 (HEATR1)
Ribosome biogenesis [BR:
tst03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
117874683 (HEATR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_HEATR1
BP28CT
U3snoRNP10
HEAT
HEAT_EZ
HEAT_2
TOR1L1_N
Ste5_C
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
117874683
NCBI-ProteinID:
XP_034620944
LinkDB
All DBs
Position
3:73318138..73372472
Genome browser
AA seq
2163 aa
AA seq
DB search
MTSLAHQLKRLALPQNDPSLLSRSEAASLLFDCKEAANIDRDTFFAIGCTGLEELMGIDP
SFEMFHSTLFSLTSKGLERSVQTKAVNEQLDENISSFLIHLSPYFMLKPAQKCLEWLIHR
FHIHLYNQDSLVGCVLPYHETKLFVRVIQLLKIGDPTHKWNWLHPIQKPGVPLARGALIT
HCYKDLGFMDFICSLVTKSVKIFSVHHGGVSQLRVLFTFYASTIVSALGAVEKITDTIIS
KLLPYIQKGLKSSLVDYRAATYMIICQLAMKVTMETSLVQSLTLQISKNLTKTPSLAREG
LACLLVLLQNQKGEGLGKKPFRYLCNIPDLVIILHGISAAYDVTPLLHYLLPHLVCSIIN
SATEGHEESEVTDNHIYTRHLEAILTSIPLEKDLDRLLACKFLEEFISYGVENESDSTKM
AVLNKQLLPFIRLLERKYPKALDLVLEEHLKDVTDQNEQDLFHQFISLSLSGSKYQFLAN
SDTSLVLSLNHPQPAVRVLAVQYLKEIIEASKEGFDKSFIEEAIFARLMDDNVEVVMTAL
SALEIFKGQISPEITVSSLLTLFQRVDLSKDGKWYKVLEGAIHILFKEEILNEKEELLNR
VVMQLLPFMVITNNNSKSAEWKMAVCLSESGLCSLHPLLKGWPEAFEKVIKSIKSADLVG
VANQKMILLFSDNITSGDPSLMLQMVEDLIHVAENESDSVRQKVIAHVISFVLVQSCCKS
QMEESYWSLALRIFRLLEGKIRKLEGSHSTEALPAKWPIESMPGGLVSVELLNKYIEKLN
VGQAVDVEDSAMLMLLLKSFVSGLKPPVSFLKDETWWNPESLNENSREYLRLLLGLFDIL
VSGASEGADALQFRALLSLLFKVHLEDSEDLFKFLSVLWTYNYNLSNQLNYTVNAMLQTQ
ALYIGCAMLTSQAAQKKKQLVSASSPVVISLLINLGSPVSEVRRAALNCLHSLSGIKESP
FHPILHNLVQKAEEIITDPIYVTQSLGSLFEELQTQSKQKSQQKKLLEALEHILNCVQAP
GCPSYVARSLMKILQQVNGEMILSHLLPAIDRLLEKMLKEPETVLKDEVVLLHLILGKYS
EHSAALLCKDQQSLDLFIRSLHVAKELYKGIPTFQITALGQITKPFFAAVPDGKVQQKLL
RILFDLLLNCKNPLCAQAISSVFKGISVDAEQISVELDPPEKAKALATVQQTRRQKIQQQ
RKPQVPESVPEISSVNWQRVTLILELLQHKKKVKRPQVLVPALFNLLARCLETSTSEQEN
MEYTKQLILSCLLNICQKLSPDGSRIQSDILDKEKFNVELVVQCVRVSEMPQTHHHALLL
LGTAAGMFPDKVLHNIMPIFTFMGANVMRLDDTYSFQIINKTVKMVIPALIRAEECGSPE
AAQSVEEVVIKIIHVFVDALPHVPEHRRLPILAQLIDTLGGERFLWVLLVLLFEQHVTKT
VTAATNGEKDAVLETDIEFWISVCCEFSVQHQFQSLMKIIQYLTKLPENKEGGDVSSDDP
GPKKLTRKTKTQDEEVQLFNVESHSGKQLRHFKFLSVSFMAQLLASQSFVKKIVECDGAE
ELQELEQRLLEEVLRYINVVAHSVEENADKPTAKFWRALLNKSYDMLDKVNALLPTQTFI
PVISGLMTNQLPSVRRKAMDLLNNKLQQRTRWQKAQVRQLLELIPELIAIVQRKINEEEE
EQAINRQTALFSLKLLCKCFGTDHPEPFVPVLKATIDLISSERKEERNVMGSALLCIAEV
TYTLKALAVPQLPRLMPALLKTLKHKKELVSNEIYLLSAVTALLKVVATLAHFLSPYLLD
VLLQVVRLERIAVEMGPSSQLNLRLTSLKTMLATQLGPRVLLPAITKCYNELATAWKNRL
GPLMDILKEHIAVMERDQLISHQSELTAFFMKALDFRTEHSQDDLEEVGRTESHIISCLI
SMVMKLSEVSFRPLFFKLYDWSKSEGTSKDRLLTFYRLADCIADKLKGLFTLFAGSLVKP
FADTLNQINSSKTDEAFFDSENSTEKSCLLLQFILDCMHKIFLFDTQRFVSKERAETLMA
PLVDQLENMLGGEENFQERVTMHLIPCIAQFSIAMADDSLWKPLNYQILLKTRHTSPKVR
FAALLTLLELAGKLKENYMVLLPESIPFLAELMEDECEEVEHQCQKTIQQLEVILGEPLH
SYF
NT seq
6492 nt
NT seq
+upstream
nt +downstream
nt
atgacatccctcgcccaccagctgaaacggcttgctctccctcagaatgaccccagcctt
ttgtctcgaagtgaagcagcatccttgctgtttgattgcaaggaagctgccaatattgac
agagacaccttctttgcaatagggtgcactggcctcgaagagctgatggggattgatcct
tcctttgagatgtttcattctactttgttcagtctcacatcaaagggcttggagcgcagt
gttcagactaaagcagtaaatgagcagctggatgagaatatttcatcattcctgattcat
ctgtctccttacttcatgcttaaaccagcacaaaagtgcctggaatggctaattcacagg
tttcatatccatctttacaaccaggacagtttggttggttgtgttttgccgtaccatgag
actaaattgtttgtgagagttatccagctgttaaaaattggagacccaactcataaatgg
aattggttgcatccaattcagaaaccaggagtcccccttgctaggggtgctttgattaca
cactgctacaaagatctgggtttcatggatttcatttgcagtctggtgacaaaatctgta
aagatcttttctgtgcatcatggtggcgtctctcagttgagggtcctgtttactttttat
gcctccaccatcgtgtctgctcttggggctgtagagaagataacggacactataatctcc
aaactgctcccttacatacaaaagggtttgaaatcctctctagtggattacagagctgca
acctacatgatcatctgccagttggcaatgaaagtaacaatggagacctccttggtgcag
tccttgacgttacagatcagcaagaatttgacaaaaacaccttctctagccagggaaggg
ctggcctgcctactcgttcttcttcagaaccaaaagggagagggtcttgggaaaaagcca
tttcgctacctgtgtaatattccagacctggttattatcctacatggcatttcagctgcc
tatgacgtcactccccttctgcattacctgctgccgcacctagtttgctccattattaac
tccgctactgaggggcacgaggaatctgaagtgacagataaccatatctatacgagacat
ctagaagccatacttacaagtataccactggaaaaggatttagatcgcttattggcctgt
aaatttcttgaagaatttatttcctatggtgtggagaatgaatctgattctaccaaaatg
gctgtgctcaataaacaacttcttcctttcatccgacttcttgaaagaaaatatcctaaa
gccttagacttggtactggaagagcatctgaaagatgttacagatcagaatgagcaagat
cttttccaccaatttatctctctctcattgagtggcagtaaatatcagtttctggcaaac
tcggatacctctctggtgcttagcctgaatcatccacagccagcagtcagggtcttggct
gttcagtatttgaaggagatcattgaagcatcaaaggagggctttgacaagtccttcata
gaagaagccatttttgcacgacttatggatgacaacgtggaggttgttatgactgctctc
agtgccttggagattttcaagggacaaatcagtccagaaataactgtttcaagtctgttg
actctatttcaaagagttgatctttcaaaagacgggaagtggtataaggttcttgaggga
gcaatacacattttattcaaagaagagattctgaatgagaaggaagagctattaaatcga
gtagtaatgcagttgctaccatttatggtaatcactaataataattcaaaatccgcagaa
tggaaaatggcagtttgtctatcagaatctggcctctgctccctacatcctttgttgaag
ggctggccagaagcttttgaaaaagtgataaaatccatcaagtctgcagatttggttggt
gtggcaaaccagaaaatgattctgctgttttctgataacataacttcaggggatccttcc
ttaatgttacagatggtggaagatctgatacatgtagctgaaaatgaatctgacagcgtg
aggcagaaagtaattgctcacgtaatcagctttgtgcttgtccagtcctgctgtaaatca
caaatggaagaaagttattggtcattggctctcagaatcttcagacttctggagggaaaa
ataagaaaactcgaaggcagtcattctacagaggcgcttcctgcaaaatggcctatcgag
tcaatgcctgggggcttggtgtcagtcgagttgttgaataaatacatagaaaagctcaac
gttggtcaggctgttgatgtagaagattcagccatgctcatgcttctgttgaaaagcttt
gttagtggcctgaagcctcccgtatcctttctgaaagatgaaacctggtggaatcctgaa
agtttgaatgaaaacagcagagagtatttacgcctgttgttggggctgtttgacatcctt
gtcagtggagccagtgaaggagctgatgctcttcagttcagagcactgctgagtcttttg
ttcaaggtacatttagaagattcagaggatctgttcaaattcctttcagttttatggacc
tataactataacctctcaaatcagctaaactacacagtgaatgcgatgctacagactcaa
gctttgtatatagggtgtgcaatgcttacatcgcaggctgcccaaaagaagaaacagctg
gtatcagcctcctccccagtggtaatatctttgctgattaacttggggagtcccgtgagt
gaagtgcgaagggctgctcttaattgtcttcattccctgagtgggataaaggagtctcca
tttcatcccattcttcataatctggtacaaaaagcagaggagatcataactgatcccatc
tatgtgacccagagtttgggaagcttgtttgaggagctgcagacacaaagtaaacagaaa
tcccagcagaagaagctgttagaagctttggaacacatactcaattgtgtacaagcccct
ggttgtccatcatatgttgcaagaagcttgatgaagattcttcagcaggtcaacggtgag
atgatactgtctcacctgttgcctgcaatagacagattgctggagaaaatgctaaaggaa
cctgagacagtattgaaagatgaagttgttcttctgcatctcatcctggggaaatacagt
gaacattcagctgccctcttatgcaaggatcagcagagtctggatttgttcatcagaagt
ctgcacgttgcaaaggagctttacaaaggaattccaactttccagatcacagcacttggg
cagatcactaaaccattctttgctgcagtgccagatggaaaggtgcaacagaagctattg
agaattctgtttgatttactgttaaattgcaaaaacccactttgtgcccaggcaattagc
agtgtttttaaagggatttcagttgatgctgagcagattagtgtagagctagaccctcct
gagaaagccaaagctctggctaccgttcagcaaactaggagacagaaaatacagcagcag
agaaaaccccaagttccagaatcagtacctgaaataagcagtgtgaactggcagagagtt
acactcatcctggaattactgcagcacaagaagaaggtcaagcgtcctcaggtgctagta
cctgcactttttaatctgctggccaggtgcctggaaacttcaacatcagaacaggaaaat
atggaatatacaaagcagctaatcctaagctgtctcctaaacatctgtcagaaactgtcc
ccagatggcagtaggatccagtcagatatccttgataaagagaaattcaatgtggagctg
gtagttcagtgtgtcagggtatcagaaatgcctcagacacatcaccacgcgctgctactg
cttggtactgctgctggcatgttccctgacaaagttctccataacatcatgcccattttt
acgttcatgggggcaaacgtcatgcgtctagatgatacttatagtttccaaataattaat
aagacggtgaagatggttattcctgctcttatacgggctgaagaatgtggctctccagag
gctgcacagagtgtggaggaggtagttattaaaatcatacacgtgtttgtggatgccttg
cctcatgtgcctgagcacagacgcctgcccatcctggctcagctgattgatacgttggga
ggggaacgattcctctgggttcttctagtgctcctgtttgaacagcatgtgaccaaaaca
gtgactgcagcaaccaatggagaaaaggatgctgttttggaaacagacattgaattttgg
atttctgtttgttgtgagtttagtgttcaacatcaattccagagcttgatgaaaataatc
cagtacttaacaaaactgccagagaacaaagaagggggggatgtttcatcagatgatcct
ggaccaaaaaaattaacacgcaagacgaaaacacaagatgaagaagtgcagctttttaat
gtggagtctcactcaggcaaacaattgcgacattttaaatttttatctgtctccttcatg
gcacagcttttggcttctcaaagttttgtgaaaaagatagtcgaatgtgatggagctgaa
gagctacaggagctggagcagagattattagaagaagttcttcgctacataaatgttgtg
gcacactcagtggaagaaaatgcagacaaaccaacagcaaagttttggagggctctgctc
aataagtcttacgatatgctagataaagtcaatgccttattgccgacacagacatttatc
cctgtcattagcggactgatgaccaaccagctgccttctgtgagacgtaaagcaatggat
ctcttgaacaataaattgcagcagcgcacacgttggcagaaggcccaagttcggcagctc
ttagaactaattccagagctaatcgctattgtacagcgtaaaataaatgaagaggaagag
gagcaagccatcaacaggcagactgctttgttcagcctcaaattactgtgcaaatgtttt
ggcacagaccatccagagccttttgtgcctgttctgaaagccaccattgacctgatttct
tcagagaggaaggaagaaaggaatgtgatgggaagtgctttgctgtgtatagccgaggtc
acctatacactgaaagcactagcagtacctcagcttccaaggctgatgccagcgttgctg
aagacactaaaacacaaaaaggagctggtctccaatgagatttacttgctcagcgcagta
actgcgctgctgaaagttgtggcaacactagcacacttccttagtccctatctgttggat
gttttgctgcaggtcgttcgcttggaaaggattgcagtggaaatgggtccttcatcccag
cttaatctccgtttaacatcactgaaaactatgttagctacccagcttggtcccagagtt
ctcttgccggcgattaccaagtgttacaatgaacttgcaactgcttggaagaaccgccta
ggtccccttatggacattcttaaagaacacattgcagttatggagagagaccagctcatt
tcccatcagtctgagttgacagcatttttcatgaaagccctggacttcagaacagagcac
tcacaggatgatctggaggaagttggtagaacagagtctcatattattagctgtttaatt
agcatggtcatgaagctttcggaggtttctttcagacccctcttcttcaagttatatgat
tggtccaaatcagagggtacctcaaaggacagactgttgacattctaccggttagccgat
tgcattgcagacaagctcaagggtcttttcaccctgtttgctggtagtttagtgaagcct
tttgctgacaccctgaatcagattaacagctccaaaactgatgaagctttctttgactct
gagaacagcactgaaaagagctgcttattgctgcagttcatccttgactgtatgcacaaa
atcttcctctttgatacccagcgttttgtaagcaaagagagagcagaaacgttgatggcg
cccctagttgaccagctagaaaacatgcttggaggagaagagaacttccaggaaagagtg
accatgcacctgattccatgtatagctcagttttcaattgcaatggcagatgattctcta
tggaaaccactaaactaccagattctgctgaagacaaggcacacatcacctaaggtccga
tttgctgctttgcttactttgctggaacttgcagggaaactaaaggagaactacatggtg
ctgttgccagaatccatccctttcttagctgagctaatggaagatgaatgtgaagaagta
gaacaccagtgccagaagacgattcagcaactggaagttattttaggagaaccactccac
agctacttctaa
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integrated database retrieval system
