Trachemys scripta elegans (red-eared slider): 117874817
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Entry
117874817 CDS
T07347
Symbol
CLDN20
Name
(RefSeq) claudin-20
KO
K06087
claudin
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03272
Virion - Hepatitis viruses
tst04382
Cornified envelope formation
tst04514
Cell adhesion molecule (CAM) interaction
tst04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
117874817 (CLDN20)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117874817 (CLDN20)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117874817 (CLDN20)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117874817 (CLDN20)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tst03037
]
117874817 (CLDN20)
04147 Exosome [BR:
tst04147
]
117874817 (CLDN20)
Cilium and associated proteins [BR:
tst03037
]
Other cilia and associated proteins
Stereociliary proteins
117874817 (CLDN20)
Exosome [BR:
tst04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
117874817 (CLDN20)
Exosomal proteins of colorectal cancer cells
117874817 (CLDN20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Clc-like
DUF7982
ATP1G1_PLM_MAT8
Motif
Other DBs
NCBI-GeneID:
117874817
NCBI-ProteinID:
XP_034621251
LinkDB
All DBs
Position
3:complement(90185391..90193153)
Genome browser
AA seq
219 aa
AA seq
DB search
MASAGLQFFAFILALLGVFGAITATLLPNWKVNADVGSNIITAITQMQGLWMDCTWYSTG
MFSCTLKYSVLSLPVYIQAARTTMVLSCILSAFGICISTVGMKCTKLGGDKDTKSYTSSA
GGVCFILAGIFELVPTSWYTREIISNFMDPTVPESSKNEPGGAVYIGFISAGLLFIAGVI
FCTSCFKKQQGAWIYPTKQQQFPATQQENNAGYNLKDYV
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagcaggtctacagttctttgcttttattttagctttgttgggtgtttttggt
gccatcacagccaccttactgcccaactggaaagtaaatgcagacgtgggttcaaatatc
ataacagctataacacagatgcaagggctctggatggactgcacatggtacagcaccggg
atgtttagctgcactctgaaatattcagtcctatccctccctgtctacatccaggctgca
cggacgaccatggtcctgtcttgcatcctatcagcttttgggatttgcatctccacagta
ggaatgaagtgcacaaagttgggaggggacaaggacaccaaaagctacacttcttctgct
ggaggggtctgcttcatccttgcaggaatctttgagttggtaccaacatcctggtacaca
agagaaataatttcaaattttatggacccaacagtcccagagagcagtaaaaatgaaccc
ggaggagctgtttatattggattcatttcagcaggacttctgttcattgcaggtgtgatc
ttctgcacatcctgttttaaaaagcagcagggagcatggatttaccctactaagcaacaa
cagttcccagccacacagcaagagaacaatgcaggctacaacctgaaggactacgtgtaa
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integrated database retrieval system
