Trachemys scripta elegans (red-eared slider): 117874854
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Entry
117874854 CDS
T07347
Symbol
ZC3H12D
Name
(RefSeq) probable ribonuclease ZC3H12D
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117874854 (ZC3H12D)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
117874854 (ZC3H12D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_4
zf-CCCH_2
zf-CCCH
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
117874854
NCBI-ProteinID:
XP_034621336
LinkDB
All DBs
Position
3:94578994..94595414
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AA seq
618 aa
AA seq
DB search
MEAHLGKIEFFCKLGYGKQDICKVLENLGQRALEDDVLKELIRVGSRPVAQERQAQHPLP
KLVPRGSCSSPAVPKQPEEVASDSSSHLRPIVIDGSNIAMSHGNKEVFSCRGIQLAVDWF
RERGHKDIKVFVPSWRKEAPRFDSPITDQHILDELAKQTILVYTPSRKVKGRRVVCYDDR
YIIKVAHEKDGVIVSNDNYRDLQSENPEWKWFIEQRLLMYSFVSDKFMPPDDPLGRHGPT
LYNFLSKKPVLPFTRWQPCPYGKKCTYGSKCKFSHPERQYQAQLSVADELRAKTKASSQS
LGTEEEKLKAAPTTTQGGNASHSACIERLQESSGATGSSSSSTQSFATDWFHSTQQERTY
TEHSARAWGDRPLCKLEPEQNVLQQDLQREQRLMEKQLSALSLRDKIYSANRLADTSERE
DAKDSTHQCCNLRHNHCHNLYATHHNHSLDCMCLQQCELPSHLCRHPAHSRPEYRGNVQM
LAVQSQRIQYIVDRSQSTQGLQAQQQVTRSVRSPPNGPFPYSKREDGQYQRHLQNQPPIQ
PFLLDPHKGPGSFSYSPTSHSEYLPNHAPEPLAGERAHIRSVLCSVFPYDEVDRVMFLYP
DLKDMASLILLIQRHRLL
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgcacctgggcaagatagagtttttctgcaagctggggtatggcaaacaggac
atctgcaaagtgctggaaaatctgggccaacgggccctggaggatgatgtgctgaaagag
ttgattcgggtgggtagcaggcctgtggctcaggagaggcaggcccagcatcctctccca
aaacttgtcccccgtgggtcatgtagcagtccggcagtgcccaagcagccagaagaggtg
gcaagcgattcttccagtcacttgagacctatcgtgatcgatggcagcaacattgctatg
agccatgggaacaaagaagtgttctcatgtcgggggattcagctggcagtggactggttc
agggagagaggccacaaagacatcaaggtctttgtcccatcgtggagaaaggaagcacca
cgatttgacagccccattacagatcagcacattcttgatgagcttgcaaagcaaaccatt
cttgtgtacactccatcccgcaaggtgaaaggcaggcgggtggtctgctatgatgatcgc
tatataattaaagtggcccatgagaaagatggggtgattgtttccaatgacaactacagg
gacctccagagtgagaatcctgagtggaagtggttcatcgagcaacggctactcatgtac
tcctttgtcagtgacaagtttatgcctcctgatgacccgctaggccgtcatggacctact
ctttacaatttcctcagcaaaaagccagtacttccttttactagatggcagccctgtcct
tatggcaaaaaatgcacatatggcagtaagtgcaaattttcccaccctgaacgacagtat
caagctcagctgtcagtggccgatgagctccgagccaaaacaaaggcctcgtctcaaagc
ttggggacagaggaagaaaagttgaaggctgccccaactacaacccaaggagggaatgca
tcccacagcgcttgcatagaaaggctgcaggaatccagtggtgctacaggcagcagcagc
agctccactcagagctttgcaacggattggttccattccacgcaacaggaaaggacctac
actgagcattcagctagagcctggggagacaggcccttgtgtaagctggaacccgaacaa
aatgtattacagcaagacctacagagagagcaaaggctcatggaaaagcagctctctgca
ttatccctcagggacaagatatatagtgcaaatagactggcagacacctctgagagagag
gatgcaaaggacagtacccatcaatgctgtaatcttagacacaatcactgtcacaatcta
tatgcaactcatcacaaccatagtttggactgcatgtgcttacaacagtgcgagctgcct
tctcatctttgtaggcatccagctcactctagacctgagtaccgcggcaatgtgcaaatg
ttagcagtgcagagtcagagaatccaatacattgtggacagatctcagtccacacaaggc
ctgcaggcccaacagcaagtcacacgctctgtcaggtctcctccgaatggcccatttccc
tacagcaaacgcgaagatggacaataccaaaggcatttgcagaatcagcctcccattcag
ccatttttgttagatccccacaaggggcccggctccttcagctactcacccacttctcat
agcgagtatctccccaatcatgctccagaaccacttgctggagagcgagcgcacatccgc
agcgtgctctgctcggtcttcccatacgatgaagtggatcgagttatgttcttgtaccct
gatctcaaggatatggctagtttaattttactaattcaaagacacaggctcttatga
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