Trachemys scripta elegans (red-eared slider): 117874891
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Entry
117874891 CDS
T07347
Symbol
NHSL1
Name
(RefSeq) NHS-like protein 1 isoform X1
KO
K24144
Nance-Horan syndrome protein and NHS-like proteins
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tst04812
]
117874891 (NHSL1)
Cytoskeleton proteins [BR:
tst04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
117874891 (NHSL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHS
Motif
Other DBs
NCBI-GeneID:
117874891
NCBI-ProteinID:
XP_034621434
LinkDB
All DBs
Position
3:101578714..101820521
Genome browser
AA seq
1777 aa
AA seq
DB search
MPFPLRTVEPLKLCRLEDAGGDALLGPAKAGDKERAQAAGGAGSGGRRRGAGLLLFGSLE
QVSSHSLVSLLWQLSDLSRCASDIFGEIQSQADSLCRRSARLQRRLGSLRALSARLDHRR
VKIPVSNLDEESRWTVHYTAPWHQQENVFLPSTRPPCVEDLHRQAKLNLKSVLRECDKLR
RDGYRSSQYYSQGPTFSSSSSAAYGNYQDDYEEIERKSSLLDCISQSCISACCSLVPWSL
KCSVPSPEEEKLISIKRTRTPVSNECSDINTQTNWTKSLPLPTPEEKMRQQAQAVQTDVV
PINVTGENFDRQASIRRSLIYTDTVVRRPKKVKRRKTITGVPDNIQKELAVGTGQSDFRG
HSMYVPDHYSTLGRLDSYRSAMQRSETKDTSCQTEEVKVVPPSVRRIRAQKGQGIAAQMS
QFSSSSGNMSVMSDSTGVIFASRLNNDMGFHSLPRPGARVSLQSLDQRQSISNQAEDIAS
TLSNQISKLQVDNSVVHMRNNPRTETLPRPKSQEVRSYESEKAASLACVVSPHATYSTNI
IPNATISSSSEVIVIHTTQSAGPLDSKITSSPSYTKPRDSPVANNAVSMKEDHHSSSGNW
SESSSTRHSQTSDTISSNAIMMLSLGDSAVSLSTPGNVENTSQSMSYSCRNNLPFPGHSQ
DSDGRSESSFSGDRSQSNSINSTEHWVYKSRENDETPSHKPTCATAGYSTPVSNVSSSSL
ERTSVKEDSSSLYSVDHDGYYTTMHMDSGLKSGKLCNSNNGFGNPRHSVINIFDGNEKKN
QDERSSNSDKSLIRNISLKKAKKPPLPPSRTDSLRRVPKKKTQSSGQVLDETLIATLQHS
LQLNLQCKNGSSPSQSPCSDYEDPWVLRSRSQSSVSASSSMMSTTAPNMYSLCTVTPSQS
DTSSIKSECADQWGYYSDYAGVPDDQFKCPVARSASTTANLNDYSISHLNDGSRASMPQV
ASGLAKPKNTSPEKSHRVTSPSSGYSSQSNTPTALTPVPVFLKSMSPANGKPKLKPKVPE
RKSSLLSSVSVSSSSTSLSSNTSTEGSVNMKKLDPALTSPPDAAGPPPPTPPHSPDHPLP
PPPPAPADGMDLPPLPASPSFPPPPPEAIINPSFPLGGPWFPSPPQEMSFSPFSAPSSSI
FPNVVPPPAPPLDPKLTQDATKFTQYSFKKFNQDDSGYSAVKQPANKQDSSRPVMPLITT
KALQMVQLRSVKKCTGAQTEQSAGSISEANSQEKATVIFSPQPSLKPSLSLRLSNSLDEE
MKTHSPSFKNLVQTPPQSSLPDLSDSAPEISSGQKPGNAAGLIQTFEADVSGTNIEEAPQ
SPVQNEKSHSGLISTPFQVPSGSPNKTQGISPNKKPPPISKKPKLFLIVPPPQLEFTAEK
IANVSDPVRGTSSPTRREIAHCEEAKNCLTDGLSSNEMDSGRLVPEGGAAGSTFFETVET
NVCMVQPAASPVQEAPKQEQQTTLDEGSSSDSNGDDSSNTDRHLSQEDESADVFEADTTN
NSSLPSNSFRAGSEEVATPARPRTTEDLFAAIHRSKRKVLGRKDSEDDRTRNHSPSPPVT
PTGASPNLASLKHAGSIQRSIRKSSTSNDNFKALLLKKGSRSDTSSRMSAAEMLKNTDPR
FHRTKSDSSLEFPDSPASCSPSKNKRAQEEWAKSEGLMPRSMSFSSTRYGRSRTPPSAAS
SKYNVRNRIQSSPMTVISEGDGEAVEPTESRIRRTLKEQQESQLNVFDSDDIDMNDFPYA
EEAGSNETKAPTHLDLMTQLVKPNASKKCLSPSDEKS
NT seq
5334 nt
NT seq
+upstream
nt +downstream
nt
atgcctttcccgctgaggacggtggagcccctgaagctgtgcaggttggaagatgccgga
ggagatgctctgctgggaccagccaaagcgggggacaaagagcgagcgcaggcggccggc
ggggctgggagcggcgggcgccggcgcggcgcggggctgctgctgttcggctcgctggag
caggtcagctcgcactcgctggtctccctgctctggcagctctccgacctctcccgctgc
gccagcgacatcttcggcgagatccagagccaagcggactccctgtgtcgacgcagcgcc
cggctccagcgccgcctgggctccctgcgcgctctgagcgcccgcctcgaccaccgccga
gttaaaatccctgtctccaacctagatgaagaaagtagatggacagtccattatactgct
ccctggcaccagcaggaaaatgtgttcctgccctccacgaggccaccttgtgtggaggat
ctgcatcgccaagccaagctgaaccttaagtcggtactaagagaatgtgacaagctgcgg
agggatggctatcgaagttctcaatattactctcagggtccaaccttctcttcttcttcc
agtgcagcctatggaaattaccaagatgattatgaagaaattgaacgaaagtctagtctg
ttagactgcatatctcagtcttgcattagcgcctgctgttccttggttccatggagcctc
aagtgttcagtcccttccccagaggaggaaaagcttattagcatcaagagaactagaaca
ccagtttcaaatgaatgttctgatatcaacacccaaactaactggaccaagtcacttcca
ttgccaacaccagaggagaaaatgcgacagcaagcacaagcggtccaaacagatgtggtt
cctattaatgtaactggggagaatttcgaccgccaagccagcattcggcggtctctaatt
tacacagacactgtggtaagacggccgaagaaagtcaaaaggagaaagactattacagga
gtccctgacaacattcaaaaggagctagcagttggcactggccaaagtgacttccgtggg
cattcaatgtatgtcccagatcactattccacactagggagactagacagctaccgctct
gctatgcagcgatctgaaaccaaggacaccagctgccagacagaagaagtcaaagtcgtg
cccccttcagtgagaagaatacgagcacagaaaggacaagggattgcggcccagatgtct
cagttctccagctcatctggaaacatgtctgtgatgagtgattccactggggttatattt
gcctctcgcctaaataacgacatgggttttcatagcctgcctcgacctggagcaagagtg
tctctgcagtcactagaccaaaggcagagcatctctaaccaggcagaagacatcgctagc
actttgtcaaaccagataagcaagttgcaggttgataatagtgtggtccatatgaggaat
aacccgaggactgagacactgccaaggccaaagtcccaagaggtgagaagttatgagagt
gaaaaagctgcaagcctggcatgtgtggtctctcctcatgccacatattcaaccaacatc
ataccaaatgccacgatatcatcctcttcagaagttattgtgattcataccacccagagt
gctggaccattggatagtaaaatcaccagctcaccttcctacacaaaacccagagacagt
cctgttgccaacaatgcagtaagcatgaaagaagatcaccattcttctagtggtaactgg
agtgagagcagctcaacgcgccactcccagacctcagacactatctcgtctaatgctatc
atgatgctctcccttggtgactcagctgtatccctcagcactccaggaaatgtggagaat
acgtcccaaagtatgagctatagctgtagaaacaatctccctttcccaggccactcccag
gatagcgatggcaggagtgaatccagtttttcaggggacagatcacaaagcaacagtata
aacagcacagagcactgggtgtacaaatctagagaaaatgatgagactccctcacacaag
ccaacctgtgccactgcaggttattccactcctgtaagcaacgtgagtagcagcagccta
gagagaacttctgtcaaagaagattcaagttctctgtattcagtggaccatgacggctac
tacactaccatgcatatggactctggactcaagtcaggtaaactatgcaatagtaataat
ggttttggaaaccccaggcacagtgtgattaatatttttgatggaaatgagaagaaaaat
caagacgagcggtcaagcaacagtgacaaatccctcatacgaaacatatctttgaaaaaa
gcaaagaagccacctcttccaccatccagaacagactcactcagaagggtcccgaagaaa
aaaacccagtccagtggacaggtacttgatgaaacactaattgctaccctccagcattca
ctgcagttaaaccttcagtgcaaaaatggtagttccccatcccaaagtccatgcagtgat
tatgaggatccctgggtgctgcgctctcgcagccagagctccgtcagcgcaagtagcagc
atgatgtccacaacagctccaaatatgtactctctctgtactgtcactccatcacagagt
gacacaagcagcatcaagtcagagtgtgctgaccaatggggttactacagtgactatgct
ggcgtgccagacgatcagtttaaatgcccagtggctcgttctgcaagcactacagccaac
ctcaatgattacagcatcagccacctcaatgacggctcaagggcttctatgccccaagtg
gcgagtggactggccaaaccaaagaacacttctccagagaagtctcacagagtcacatca
ccatctagtgggtattctagtcaatcaaatacacccacagcacttactccagtgcccgtg
tttttaaaatccatgtcaccagcaaatgggaaacccaagttgaaaccgaaagtgcctgag
agaaaatcttctctgctatcttcagtatccgtctcttcatcctccacttctctttcttcc
aatacatctactgaagggagtgtgaacatgaagaaactggacccagccctgacctcccct
cctgatgctgctggtcctccacctccgacacctccacattcccctgatcatcctctccct
cctccgccccctgccccagcagatggaatggatctgcctccattaccagcttctcccagc
ttccctccacccccgccagaagctattataaatccttcctttcccctgggtggtccgtgg
tttccttctcctccacaggaaatgtcattcagtcctttttctgccccttcttcctccatt
ttccccaatgtagtacctccaccagcaccacctcttgaccccaaactgacacaagatgca
actaaattcacacaatattcttttaagaaatttaatcaggatgattctggctacagtgca
gtgaaacagccagccaacaagcaagactccagtaggcctgtaatgcccttaataaccacc
aaagcactgcaaatggtacagctgaggtctgtgaaaaaatgtacaggagcacagactgaa
caatcagctggatctatttctgaagccaactctcaggaaaaagcaactgtaattttctca
ccacagccttctctaaaaccatctctttcactaaggctcagtaacagcctggatgaagag
atgaaaactcatagtccttccttcaaaaacttagttcaaactcctcctcagagttcactt
ccagatctcagtgacagtgcacctgagatcagcagtggtcaaaaacctggaaatgcagca
ggtctaatacaaacctttgaagctgatgtatcaggaacaaacattgaagaagcacctcag
tctcctgtgcagaatgaaaaatctcactctggccttattagtacaccatttcaggtgcca
tcgggttctccaaacaagactcagggtatatcaccaaacaagaagccacctcctatttca
aagaaacccaaactgttcctcattgtgccacctccgcagctagaatttacagcagagaaa
atagctaacgtgagtgatcctgtcagaggcacatcaagtccaactaggagagagattgca
cattgcgaagaagcaaaaaattgtcttacagatggactcagttccaatgagatggactcg
ggcagattggttcctgagggaggagctgctggttccaccttctttgaaacagtggaaacc
aatgtctgtatggtacagcctgcagcatcaccagttcaagaagctcccaagcaggagcag
cagaccactttggatgaaggaagcagttcagacagcaatggagacgacagcagtaacact
gacagacatctatctcaagaggatgaaagtgctgatgtgtttgaggcagacacaacaaat
aattcatcactgccaagcaacagtttcagggcagggagtgaggaggtggcaacgccagct
agaccgagaactactgaggatctgtttgcagccattcacagatccaaaaggaaagtcctt
ggccgcaaagattctgaagatgaccgcacccgcaaccattctccttcgcccccagtaaca
cccactggtgcgtccccaaatctagcttccctcaagcacgcaggatcaattcagagaagc
attcgcaagagcagcaccagcaatgataacttcaaagccctgctgctgaagaaagggagc
cgctcagacaccagttcccgcatgtcagcagcagagatgctgaagaatacagatccgagg
ttccaccgaacaaagtcagactcttcccttgagtttcccgacagccctgcgagctgttcc
cccagcaagaacaaaagggcccaggaagaatgggccaagagtgaaggcctgatgccaagg
agtatgtccttttccagcactaggtatggcaggtcgcgaacaccaccctctgctgccagc
agcaagtacaacgtccggaaccgtatccagagcagccccatgactgttattagcgaggga
gatggggaagcagtcgaaccaacagagagcaggatccgtaggactttaaaagagcagcaa
gagagccagctcaatgtgtttgacagcgatgacatagacatgaatgattttccgtatgcc
gaggaggccggttccaatgagacgaaggctccaacccacttagacttaatgactcaactg
gtaaaaccaaatgcttcaaagaagtgtctaagcccttcagacgaaaaaagttaa
DBGET
integrated database retrieval system
