Trachemys scripta elegans (red-eared slider): 117874925
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Entry
117874925 CDS
T07347
Symbol
HGF
Name
(RefSeq) hepatocyte growth factor isoform X1
KO
K05460
hepatocyte growth factor
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04010
MAPK signaling pathway
tst04020
Calcium signaling pathway
tst04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117874925 (HGF)
04020 Calcium signaling pathway
117874925 (HGF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117874925 (HGF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tst04052
]
117874925 (HGF)
00536 Glycosaminoglycan binding proteins [BR:
tst00536
]
117874925 (HGF)
Cytokines and neuropeptides [BR:
tst04052
]
Cytokines
Growth factors (RTK binding)
117874925 (HGF)
Glycosaminoglycan binding proteins [BR:
tst00536
]
Heparan sulfate / Heparin
Growth factors/receptors
117874925 (HGF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kringle
Trypsin
PAN_1
DUF1986
IL12
Motif
Other DBs
NCBI-GeneID:
117874925
NCBI-ProteinID:
XP_034621528
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All DBs
Position
1:20316896..20394939
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AA seq
726 aa
AA seq
DB search
MWANKLLPVLLLHLLLLLPITIPLAEGKGKRRNALHDFKKTGETMLIRSDLSLVGKTKLL
NTTEQCAKRCSRNKGFSFPCKAFAFDKATKRCHWFSFNSMTNGVRKKQDHAFDLYEKKDY
IRNCIIGKGANYKGTISVTKSGIQCQAWNSMIPHEHSFLPSSYRGKDLQENYCRNPRGEE
GGPWCFTSNPEIRHEVCDIPLCSEVECMTCNGESYRGPMDHTESGKECQRWDLQRPHRHK
FRPERYPDKGFDDNYCRNPDGKPRPWCYTLDPDTPWEFCAIKTCAQTIVNITDAAVETTE
CIKGQGEGYRGTVNTIWSGVQCQHWDSQFPHQHNITPENFKCKDLRENYCRNPDGSESPW
CFTTDPNIRIGYCSQIPKCDVSSEQDCYHGNGKNYMGNLSKTRSGLTCSMWDKNIDDLRR
HIPVFREPDISKLKKNYCRNPDDDAHGPWCYTSNPLIPWDYCPVSRCEGDTTPTTTNLDH
TVISCASTKQLRVVNGIPTQTNEGWMVSLAYRNKHICGGTLVKENWVLTARQCFPSRYKD
LKDYEAWLGVHNIKGREEKHKQVLNISQLVYGPEGSDLVLLKLARAVVFNNFVDLIRLPI
SGCTIPERTTCSVYGWGHTGLIHFDGLLQVANLFIMGNEKCNQYLKGKITVNESEICAGA
EGIGTGPCERDYGGPLVCEQNRMKIIVGVIVPGRGCAIPNRPGIFVRVAYYSKWIRKILL
TYKSEL
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtgggccaacaaactcctgccggtcctgctgctccatctgctgctgctgcttcccatc
accatccctttggcagagggcaaagggaaaaggagaaatgctcttcatgacttcaaaaag
acaggcgagactatgctaattagatcagacctatcgctagtgggaaaaaccaagttgtta
aacaccacagagcaatgtgccaagagatgcagcaggaataaaggcttttcgttcccttgc
aaggcctttgcttttgacaaagctacaaaacgatgccattggttctctttcaatagcatg
acgaatggagtgaggaagaagcaagaccatgcgtttgatctatatgaaaagaaagactac
attagaaactgtatcatcggtaaaggtgcaaactacaagggaacaatatcagttaccaaa
agtggcatccagtgtcaggcatggaattctatgataccccacgagcacagctttttgcct
tcgagctatcggggtaaagacctacaggaaaactactgtcggaatccccgaggggaagaa
ggagggccttggtgttttacaagcaatccagagatacgccatgaagtctgtgacattcct
ctctgttcagaagttgaatgcatgacctgcaatggagaaagttacagagggccaatggat
cacactgaatcaggcaaggaatgccagcgctgggaccttcagagaccacacaggcacaaa
ttcagaccagagagatatcctgacaagggctttgatgataattactgccgcaatcccgat
ggcaagccaagaccatggtgctacactcttgaccctgacaccccgtgggagttctgtgca
attaaaacgtgtgcgcagaccattgtgaacatcactgatgctgccgtagaaacgacagag
tgcatcaaggggcaaggtgagggctaccgaggtaccgtgaacaccatatggagtggagtc
caatgtcagcactgggactctcagtttcctcaccagcacaatatcactcccgaaaacttc
aagtgcaaggatttaagagagaactactgtcgaaatccagatggatcggagtcaccttgg
tgttttactactgacccaaacattcggatcggttattgctcccaaatacctaagtgtgat
gtgtcaagtgaacaagattgctatcatgggaatggcaagaattacatggggaatttgtct
aagacaagatctgggctaacttgctccatgtgggacaagaatattgatgacttaaggagg
cacataccagtattcagggaaccagatattagcaaattgaagaaaaactactgccgcaat
ccagatgatgatgctcatggtccctggtgctacacaagcaatcctctcattccctgggac
tactgcccagtttctcgatgtgaaggcgatacaactcctaccacaaccaatttagaccat
actgtcatttcttgtgcctcaaccaaacagttgagagttgtaaatggaatcccaacacaa
actaacgaaggatggatggttagtttggcttacaggaataaacatatctgcggaggtact
ttggtaaaggaaaactgggttctaacagcaagacaatgtttcccttctcggtacaaagat
ttgaaagactatgaagcatggcttggagttcataatatcaaaggaagagaagagaaacac
aaacaagttctgaacatctcccagttggtgtatggacctgaagggtctgatttggtatta
ttgaaacttgccagagctgtagtattcaataattttgtggatctcatcagattgcccatt
tctggatgtaccattccagagaggaccacctgcagtgtttacggatggggacacacagga
ttgattcactttgatggcctgctccaagtagcaaacctatttattatgggaaatgagaag
tgcaaccaatatctcaaaggaaagattactgtgaacgagtcagaaatctgcgctggggct
gagggcattggcactggaccatgtgagagggattatggtggccccttggtctgtgaacaa
aacaggatgaaaataatagtgggtgttatcgttcctggccgcggatgtgctattccaaat
cgtcctgggatttttgtcagagtggcatattactccaagtggatacgcaaaatcttgttg
acgtacaaatctgagttatag
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