KEGG   Trachemys scripta elegans (red-eared slider): 117875064
Entry
117875064         CDS       T07347                                 
Symbol
ATG5
Name
(RefSeq) autophagy protein 5 isoform X1
  KO
K08339  autophagy-related protein 5
Organism
tst  Trachemys scripta elegans (red-eared slider)
Pathway
tst04136  Autophagy - other
tst04140  Autophagy - animal
tst04145  Phagocytosis
tst04216  Ferroptosis
tst04621  NOD-like receptor signaling pathway
tst04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:tst00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    117875064 (ATG5)
   04140 Autophagy - animal
    117875064 (ATG5)
   04136 Autophagy - other
    117875064 (ATG5)
  09143 Cell growth and death
   04216 Ferroptosis
    117875064 (ATG5)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    117875064 (ATG5)
   04622 RIG-I-like receptor signaling pathway
    117875064 (ATG5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tst04131]
    117875064 (ATG5)
   03029 Mitochondrial biogenesis [BR:tst03029]
    117875064 (ATG5)
Membrane trafficking [BR:tst04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    117875064 (ATG5)
Mitochondrial biogenesis [BR:tst03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    117875064 (ATG5)
SSDB
Motif
Pfam: ATG5_UblA ATG5_UblB ATG5_HBR DUF8018
Other DBs
NCBI-GeneID: 117875064
NCBI-ProteinID: XP_034621837
LinkDB
Position
3:124615157..124762828
AA seq 275 aa
MTDDKDVLRDVWFGRIPTCFTLYQDEITEREAEPYYLLLPRISYLTLVTDKVKKHFQKVM
RQEDVTEIWFEYEGTPLKWHFPIGLLFDLHASNTALPWNITVHFKNFPEKDLLHCPSKDV
IEAHFMACVKEADALKHKSQVINEMQKKDHKQLWMGLQNDKFDQFWAINRKLMEYPPEDS
GFRYIPFRIYQVTTERPFIQKLFRPVAANGQLNTLGDLLKEVCPAAITPEDGEKKNQVMV
HGIEPMLETPVQWLSEHMSYPDNFLHISIIPQPTD
NT seq 828 nt   +upstreamnt  +downstreamnt
atgacagatgacaaagatgtgcttcgagatgtgtggtttggacgaataccaacctgcttc
acgctgtatcaggatgagataactgaaagggaagctgaaccttattatttgcttttacct
agaataagctacttgacgctggtaacggacaaagtgaaaaaacactttcagaaggttatg
agacaagaggatgttactgagatatggtttgaatatgaaggcacaccactgaaatggcat
tttccgattggattgctatttgaccttcatgcatcaaatacagcccttccttggaacatc
acagtacatttcaagaatttcccagaaaaggatctactgcactgtccttctaaagatgtg
attgaagctcatttcatggcttgtgtaaaggaagcagatgctttaaagcacaaaagtcaa
gtcatcaatgaaatgcagaaaaaggatcataaacagctctggatggggttacagaatgac
aaatttgaccaattttgggccataaatcggaaactcatggagtatcctccagaagatagt
ggatttcgctacatcccatttagaatatatcaggtaacaacggaacgaccttttatacag
aagttatttcgtccggttgctgcaaatgggcagctaaatacgctgggagatctcctaaaa
gaagtttgtcctgctgcaattactcctgaagatggagaaaagaagaatcaagtgatggtt
catggaattgagccgatgcttgagacaccagtacagtggctaagtgaacatatgagctat
cctgataattttcttcacattagtattattccccaacctacagattga

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