Trachemys scripta elegans (red-eared slider): 117875075
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Entry
117875075 CDS
T07347
Symbol
ASCC3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tst03400
]
117875075 (ASCC3)
Enzymes [BR:
tst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
117875075 (ASCC3)
DNA repair and recombination proteins [BR:
tst03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
117875075 (ASCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
ASCC3_N
WHD_SNRNP200
ResIII
Helicase_C
AAA_22
Helicase_PWI
AAA_19
AAA_30
Motif
Other DBs
NCBI-GeneID:
117875075
NCBI-ProteinID:
XP_034621870
LinkDB
All DBs
Position
3:128952402..129432434
Genome browser
AA seq
2212 aa
AA seq
DB search
MALPRLTGALRSFSNVTKQDDYSEELGDLMNKRSKLHRQLMSSELTWKKILKFVEDSLDK
KEQQLVNGHLRTILQAAKQIVGTENGQEAIESGAVFLFKTFHMKECVGHDETKAIKQMFG
PFPSSSATAACNATCRIASYFTEEQLTALIRIAEEQNGDNRVIFGKNIVFSFDMHDLDHS
EELPINGEAAEQKTISLDYKKFLNNDLENFQNCYGNNSDLKSLEKVDDSFLWYEVGKFLN
ESLKGTPGEPTTDDLCCTLYEMLASSKSGDELQNELFELLGPEGFELIEKLLQNRSVIVE
RSRSWPNDDKLQALQEQCKKLAGDNTKPNYGCQVTIQSEQEKLLMKQYRREEKRIARREK
RAGEDGESFGEGLMCFDPKELRMQREQSLLNARSVPVLGRQREMDFEKIYYPHVYDSQAE
AMRTSAFIGGAKMLLPEAIQRENNKMYEEVKIPHSEPMPIGIEEKIVYIKDLDEIGQLVF
KGMKKLNRIQSIVFETAYSTNENMLICAPTGAGKTNIAMLTVLHEIRQHVQQGVIKKDEF
KIVYVAPMKALAAEMTNYFSKRLEPLGISVKELTGDMQLSKGEILRTQMLVTTPEKWDVV
TRKSVGDVALSQLVKLLILDEVHLLHEDRGPVLESLVARTLRQVESTQSMIRILGLSATL
PNYLDVATFLHVNPYIGLFYFDGRFRPVPLGQTFIGIKTTNKVQQMNNMEEVCYENVLKQ
ITAGHQVMVFVHARNSTVRTAMALREKAKNNGHICYFLPTQGPDYGQAEKQVQRSRNKQL
RELFPDGFSIHHAGMLRQDRSLVENLFSHGHIKVLVCTATLAWGVNLPAHAVIIKGTQIY
AAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKLSHYLTLLTQQNPIESQFL
ESLADNLNAEVALGTVTNVEEAVKWISYTYLYVRMRANPLVYGISHKAYQMDPGLEKHRE
QLVIEVGRKLDKARMIRFEERTGFFSSTDLGRIASHYYIKYNTIETFNEHFDAHKTEGDI
LAIVSKAEEFEQIKVREEEIEELDALLNNFCELSAPGGVENSYGKINILLQTYISRGEID
SFSLISDSAYVAQNAARIVRALFEVALRKRWPAMTYRLLNLSKVIDKRLWGWANPLRQFS
VLPPSVLTKLEEKNLSVDKMKDMRKDEIGHMLRHVHIGLKVKQCVHQIPSITMEAAIQPI
TRTVLRVRLTITPDFKWNDQVHGTVGEPWWIWVEDPTNDHIYHSEYFVIQKKQVIPKEAQ
QLVFTIPIFEPLPSQYYIRAVSDRWLGAEAVCIINFQHLILPERHPPHTELLDLQPLPIT
ALGYREYEALYKFTHFNPIQTQIFHTLYHTDCNVLLGAPTGSGKTVAAELAIFRIFNKYP
TSKAVYIAPLKALVRERIEDWKVRIEEKLGKKIVELTGDVTPDMRAIAQADLIVTTPEKW
DGVSRSWQNRTYVQKVAILIIDEIHLLGDERGPVLEVIVSRTNFISSHTEKPVRVVGLST
ALANARDLADWLNINQMGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPAFQAIRS
HSPAKPVLVFVSSRRQTRLTALELIAFLATEDDPKQWLKMDEREMNDVIVTVRDSNLKLT
LAFGIGMHHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVIVKGTEFYDGK
TRRYVDYPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLEVL
SDHLNAEIAAGTITSKQDAMDYITWTYFFRRLIMNPSYYNLDDVSHDTMNKFLSNLVEKS
LIDLECSYCIEIGEDNRSIEPLTYGRIASYYYLKHQTVRMFKDRLKPECSVEELLSVLSD
AEEYADLPVRHNEDQMNSELAKHLPIEVNPHSFDSSHTKTHLLLQAHFSHAMLPCPDYAT
DTKTVLDQSIRICQAMLDVAANQGWLVTALNITNLVQMVIQGRWKHDSSLLTLPNVEQHH
LHLFRKWNQEKRKGLCGGYQGPIECLPELIAVSEGKENIFASIVDRDLQTVHITQAWNFL
SHLPVIDVSLSIKGWRDDSSQEQNELPIPTLATDMRDDKKWIKLHADQEYVLQINLQRVQ
MRHYKGRQDSKAVAPRFPKAKDEGWFLILGEVDKKELIALKRVGYVRYRNAVSVAFYTPE
TPGKYIYTLYLMSDSYLGMDQQYDIYLNIKPPSISAQISTEVSEAVSHLALK
NT seq
6639 nt
NT seq
+upstream
nt +downstream
nt
atggccttacctcgtcttacgggagctttacgctctttttcaaatgtcactaaacaagat
gattatagtgaagaattgggtgacttaatgaataaaaggtcaaaattacatagacagtta
atgagctctgagcttacatggaagaaaatactaaaatttgttgaagatagtttggacaag
aaagaacagcagttggtaaatggtcatttaagaactatattacaggctgcaaaacaaata
gtaggaacagaaaatggacaagaagcaattgaaagtggagctgtttttctctttaagacg
tttcacatgaaggaatgcgttggtcatgatgaaacaaaggcaatcaagcagatgtttggg
ccctttccatcatcatctgctactgccgcctgtaatgccacatgccggattgcttcttac
ttcactgaagaacagcttacagcacttatacggattgctgaagaacaaaatggtgataac
agagtaatctttggtaaaaatatagtattttcatttgacatgcatgacctggatcactct
gaagaactgccaataaatggtgaggctgctgaacagaaaactataagcttagattacaag
aaatttctgaataacgatttggaaaacttccagaattgttatggcaataactctgatctc
aagtcattggaaaaagtggatgattcttttctgtggtatgaggttgggaagtttctaaat
gaatcactaaaaggaacccctggagaaccaacaacagatgatctctgctgcactttgtat
gagatgcttgcatctagtaaaagtggtgacgagcttcagaatgagttattcgagctgtta
ggccctgagggctttgaactcatagagaaactcctacagaataggtctgtgattgtggag
agatctcggtcctggccaaatgatgacaagctgcaggctctacaagaacagtgtaaaaag
cttgcaggtgacaacactaaacccaattatggttgtcaagtcacaattcaatctgaacaa
gaaaagctgttaatgaaacaatatcgtcgggaagaaaaacgaattgccagacgagaaaaa
cgagctggggaagacggagaaagttttggagaaggactaatgtgctttgatcccaaggag
ctgcggatgcaaagagaacaatcacttctgaatgctcgaagtgtgccggtcctaggcagg
cagagagagatggactttgaaaaaatttattatccacatgtttatgattcccaggctgaa
gctatgagaacatcagcattcattggaggtgcaaagatgcttctaccggaggcaatccag
agagaaaacaacaaaatgtatgaagaagtaaagatcccccatagtgaaccaatgcctatt
ggcatcgaggaaaaaatagtttatatcaaagacttagatgagattgggcaactcgtattt
aaaggcatgaaaaaactaaaccgaatccaatcaatagtttttgagactgcctacagtaca
aatgagaacatgctgatctgtgcacccaccggagctgggaaaactaacattgccatgcta
actgtcctgcatgaaattcgccagcatgttcagcaaggagttatcaaaaaggatgagttt
aagattgtgtatgttgctcctatgaaggctttggcagctgaaatgacaaattacttcagc
aaacgtctggagccactaggcatcagtgtgaaagagttgactggtgatatgcagttgtca
aagggtgaaattcttcgaacacagatgcttgtgaccactccagagaaatgggatgtagtg
acaagaaagagtgttggggatgtagcactctctcaacttgtaaagctcctgattcttgat
gaagtgcatctgttgcatgaagacagaggaccagtgctagagagtttagtggcacgcacc
ttacggcaggttgaatctacacagagcatgatcaggattttgggtctttcggctacatta
cccaattaccttgatgttgccacatttctacatgttaatccctacattggactattctat
ttcgatggccgttttcgacctgtaccacttgggcagacatttataggaattaaaacaaca
aataaggtgcagcagatgaataatatggaggaagtatgttatgaaaatgttttgaagcaa
ataacagctggacaccaggtgatggtgtttgttcatgctagaaattccactgtacgaact
gccatggctcttcgagagaaagcaaaaaacaatggtcatatttgctactttttgccaacc
caaggacctgattatgggcaagctgaaaaacaagtacaaaggtccagaaacaagcagtta
cgtgaattgtttccagatggatttagtattcatcatgcaggaatgctacggcaagacaga
agtttggttgagaacttgttttctcatggacatatcaaagtcctagtttgtacagccaca
ttagcctggggtgtcaatcttcctgctcatgctgttattattaagggaacacaaatatat
gctgcaaaaagaggctcctttgttgaccttggaattttagatgtcatgcagatatttggt
cgagctggacggcctcagtttgacaaatttggagaaggcatcattattacaacacatgat
aaactcagccattacctgactctgcttactcagcagaacccaattgagagccagtttctt
gaaagccttgctgacaacttaaatgcagaggttgctcttggaacagtaactaatgtggag
gaagcagtaaagtggataagttacacttatctttatgtacggatgagagcaaatccatta
gtatatggcatcagtcacaaggcttatcagatggatccggggctagagaagcacagagaa
caactggtgattgaagttggcagaaagctagacaaagcccgcatgattcgttttgaagag
agaactggatttttttcttcaacagatttaggcagaattgccagccactattatattaag
tataatactattgagactttcaatgaacattttgatgctcacaaaacagaaggtgatatt
cttgctatagtatctaaggcagaagaatttgaacagatcaaggtaagagaagaagaaata
gaggaactggatgccttactgaacaatttctgtgaactttctgctcctggaggtgtggag
aacagttatgggaagataaatatcctccttcaaacatatattagccgaggagagattgat
agtttctcccttatttcagactctgcatatgttgcacagaatgcagctcgtattgttcgt
gccctttttgaggttgctcttaggaaacgatggcctgcaatgacgtaccggctactgaac
ctcagcaaagtcattgacaagcggctgtggggctgggccaaccctttgcgacagttctca
gtgctgccaccatcagtcctcacaaagctggaggagaagaatctctctgtagataagatg
aaggacatgaggaaagatgaaataggtcacatgctgcgtcatgtgcatattgggttaaag
gtcaaacagtgtgtccatcaaattccctccattacaatggaagcagctattcagccaatt
acacgtactgtactccgtgttaggctgaccatcactcctgacttcaagtggaatgatcag
gtgcatggcacagttggcgagccctggtggatctgggtggaagaccccactaatgatcac
atttatcattcagagtattttgtcattcagaaaaagcaggtcattcctaaagaagctcag
cagctggtgttcacaatacctatttttgaacctttgccttcccaatattacattcgagct
gtatctgatagatggttaggagcagaggctgtttgtatcataaattttcagcatctgatt
ctaccagagagacatccacctcacacagaactattggatcttcagcctttgcctatcaca
gctttgggatatcgagagtatgaagccctctacaaattcacccatttcaaccctatccag
acgcagatatttcatacgctgtatcatacagactgtaatgttcttcttggagcccccaca
ggctctggaaagactgtcgcagctgagttagccatcttcagaattttcaacaagtatccc
acatctaaggcagtatacattgcccctttaaaagcactggtacgagagagaattgaagat
tggaaagtcaggattgaagaaaaacttggtaaaaagatagtagaattgacaggggatgtg
acgcctgatatgagagctattgcccaagctgaccttattgtaactacaccagagaagtgg
gatggggtcagtagaagttggcaaaacaggacctatgttcagaaagttgccattctcatc
atagatgagatccatctgctaggggatgagagaggcccagtactggaagttattgtgtct
cgaactaacttcatctcatctcacacagaaaagcctgtaagagtagttggtttatccaca
gcattagcgaatgcaagagaccttgctgactggctaaatattaatcagatgggtctgttc
aacttccgaccatctgtacgtccagttccattggaggtacacattcagggcttccctggc
cagcattactgtcctcgcatggctagtatgaataaacctgcatttcaagctattaggagc
cattctccagccaagcctgtccttgtgtttgtttcatccagacgtcagactagactcact
gccctagagttgattgctttcctggctactgaggatgatccaaagcaatggctgaaaatg
gatgaaagagagatgaacgatgttatagtgacagtaagagactctaatctgaagctgact
cttgcatttggaataggcatgcaccatgctgggctacatgagagagacagaaaaactgtg
gaagaactatttgtgaattgcaaaatccaggttcttattgccacaagcacgttagcctgg
ggtgtaaattttccagctcatttagtaattgttaagggaacagaattttacgatggaaaa
acaaggcgttatgtggattatcccattacagatgtacttcagatgatgggacgtgctggt
agaccacagtttgatgaccaaggcaaagctgtgattttagtccatgatattaagaaagac
ttctacaaaaagtttctttatgaaccttttccagtagaatcaagtttgttggaagtgctc
tctgatcacttgaatgctgaaattgctgctggaactattacttccaagcaggatgcgatg
gattacatcacctggacttacttcttccgtcgtcttatcatgaaccctagttactataat
ttagatgatgtgagccatgacaccatgaacaagttcctttcaaaccttgttgagaaatcc
ctcattgacctggaatgttcctactgtattgaaattggggaggataatcgtagcattgaa
cctctgacatatggccgcattgcttcttactactatttgaagcatcaaactgttaggatg
ttcaaggatcggttaaaacctgaatgcagtgttgaagaattgctctcagttctgtcagat
gctgaagagtatgcagatcttccagtgagacacaatgaagatcagatgaacagtgaactg
gcaaaacatctccccattgaagtcaatcctcattcatttgacagttcccacacaaaaacg
catcttctgctgcaagcccattttagtcatgccatgctgccttgcccagactatgctact
gataccaagacagtgttggaccaatctataagaatatgtcaggcaatgctggatgttgca
gcaaaccagggttggttagtgactgctctgaatataaccaatctggtgcagatggttatc
caaggccgatggaaacatgactcttccctgcttactttgcccaatgtagaacaacaccat
cttcacctttttaggaagtggaaccaagaaaaaaggaagggcttgtgtggaggttatcaa
ggacctattgagtgtcttcctgaattgatcgctgtctctgaaggaaaagaaaacattttt
gcttccattgtagaccgtgacttgcaaactgtacacattacacaggcttggaacttcttg
tcccatttgccagttatagatgttagtttgagcatcaaaggatggcgggatgactcatct
caggagcagaatgaactgcctatccctactttggcaacagatatgcgggatgacaaaaag
tggatcaagttacatgctgatcaagaatatgtcctccagataaatttgcagagagtccag
atgaggcattacaagggaaggcaagacagtaaagcagttgctcctcgattccccaaagcc
aaagatgaagggtggtttttgatattgggggaagtggataaaaaagaactcattgccctg
aaaagagttggatatgtcagatatcgaaatgctgtctcggttgctttttatactccggaa
actcctggaaagtatatctacacattgtatcttatgagtgacagttaccttggcatggac
caacagtatgacatttatctgaatatcaaaccacccagcatctcagcacagatcagcact
gaggtctctgaagctgtgagtcacttggctctgaagtaa
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integrated database retrieval system
