Trachemys scripta elegans (red-eared slider): 117875295
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Entry
117875295 CDS
T07347
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tst03021
]
117875295 (TAF1B)
Transcription machinery [BR:
tst03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
117875295 (TAF1B)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
DUF5816
Motif
Other DBs
NCBI-GeneID:
117875295
NCBI-ProteinID:
XP_034622384
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All DBs
Position
3:173559439..173617526
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AA seq
575 aa
AA seq
DB search
MEEEDTRDYSEPCVQCSVVNWGLTDEGRFYCKSCHNVIERTKEVLTSDVVPNTKIQSISR
GFRKRKKIDKGWEWYVCEGFQYILKKQAEALQTLGVCPQMKDEILCNFWRRYLQKSKQAY
CTTPASYTCKALSISDISTDVDSEPERISIHGLSSFSESDGDLQTESSFGHVSSIGNASA
RETTSICSGSVDGGSYLLKRKKGNLRMSMPMTLSFCYIALLWLREPVTLSDLLRFVIDGH
IPYLNAFQYFPEEMKLYGVDLKIFRVESWPVYEDVHNKMSELAAFLDLPCFPAITDSCFL
HPNILCIKYLMEANLPDELHDWTCRVVKKIHVGETDFLTLDPVNKSARKVKYDVLAAAII
IVVLKLLFLLDDQYEWLNANFAGKRNQKNKEGCLWFDFKKWYKVMKKSVDVEQKKLDEER
ARCLWKCEKPLFYSAKEKSVVLKKRQMVVNLQRQFGALSGSMQVAEKQSPSSFQLNWAEE
NTDGNCFHGHILEGVLQEKGNSLTTMNTKYWLCTVKLCNEKICGHLTHYKESDFPQSYQF
VLNLFSFLLRVPASLIHEEVCLIEHKLFKTKLHRK
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaggacacgagagattacagtgaaccttgtgtacagtgttctgttgtaaac
tggggtcttactgatgaaggcagattttattgcaagtcttgtcacaacgtcatagagagg
actaaagaggttttaacttctgatgttgttcctaacacaaagatccagtccatctccaga
ggatttagaaagagaaaaaaaattgataaaggctgggaatggtatgtttgtgaaggtttt
cagtacatactcaagaagcaagctgaagctctgcaaactttaggagtgtgtccacagatg
aaggatgaaattctatgcaatttctggagacgttaccttcagaagagcaaacaggcatat
tgcaccacaccagctagttatacttgcaaagcattatctatatctgacatcagtacagat
gtggatagcgaaccagagagaataagtattcatggcttgtcatctttctctgaaagtgat
ggagatttacagacagaaagcagctttggacatgtttcttccattggcaatgcctcagca
agagaaaccacatctatctgctccggatcggtagatggtggttcatatttacttaagagg
aaaaaagggaacttgaggatgtctatgccaatgacactttcattctgctatattgcatta
ctctggctgagagaaccagtgacattatcagatctcttaaggtttgttatagatggtcac
attccttacttgaatgcttttcagtattttccagaggagatgaaattgtatggagttgat
ctcaagatctttcgtgtagagtcttggcctgtatatgaagatgtgcataacaagatgtct
gaacttgcagcgtttttagatttgccttgttttccagctataactgatagctgctttctt
catccaaacatcttgtgcattaaatatctgatggaagccaacttacctgatgaattgcac
gattggacttgcagagtggtaaaaaagatccatgttggagaaacagactttctgacactt
gatcctgtgaataaatcagcaaggaaagtaaaatatgatgttcttgctgcagccatcatt
atagtagtgctcaaattactatttttactagatgatcaatatgaatggttaaatgcaaac
tttgctggaaaaagaaatcaaaagaacaaagaaggctgcctgtggtttgatttcaaaaag
tggtacaaggttatgaagaagtctgtggatgtggaacagaagaaattagatgaagaaaga
gcccggtgtctgtggaaatgtgaaaaaccactattctactcagccaaggaaaaatctgta
gttcttaagaaaagacaaatggtagtgaacttacaaagacagtttggcgcactgtctggt
tcaatgcaagttgctgaaaagcaaagcccttcaagtttccagttaaactgggctgaagaa
aacacagatgggaattgttttcatgggcatatcctagagggagttttgcaagaaaaaggc
aattcacttacaaccatgaacaccaagtattggctgtgtacagttaaactatgtaatgag
aagatatgtgggcacctgacacactataaagaatcagactttcctcagagctaccagttt
gtgttaaacctgttctccttcctcctgagggtaccagcctctctcatccatgaagaggtg
tgtttaatagaacacaaactgtttaaaacaaaactccacagaaagtaa
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