Trachemys scripta elegans (red-eared slider): 117875421
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Entry
117875421 CDS
T07347
Symbol
EXTL3
Name
(RefSeq) exostosin-like 3
KO
K02370
alpha-1,4-N-acetylglucosaminyltransferase EXTL3 [EC:
2.4.1.223
2.4.1.224
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
tst01100
Metabolic pathways
Module
tst_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
117875421 (EXTL3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tst01003
]
117875421 (EXTL3)
Enzymes [BR:
tst01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.223 glucuronosyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
117875421 (EXTL3)
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
117875421 (EXTL3)
Glycosyltransferases [BR:
tst01003
]
Glycan extension
O-Glycan
117875421 (EXTL3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
ADIP
MscS_porin
DUF1664
Seryl_tRNA_N
CCDC22_CC
Noelin-1
EXOC6_Sec15_N
TPR_MLP1_2
TBK1_CCD1
BRE1
THOC7
Motif
Other DBs
NCBI-GeneID:
117875421
NCBI-ProteinID:
XP_034622631
LinkDB
All DBs
Position
3:complement(196048793..196275609)
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AA seq
919 aa
AA seq
DB search
MTGYTMLRNGGVGNGGQPWVLRWSSRIRLTWLSFTLFIILVFFPLIAHYYLTTIDDADDA
GKRIFGPRTGNELCEVKHVQDLCRIRESVSEELLQLEAKRQELNSEIAKLNLKIEACKKS
IENAKQDLLQLKNVISQTEHSYKELMAQNQPKLSLPIRLLPDKDEANLPLPKSNRNCRLH
NCFDYSRCPLTSGFPVYVYNSDQYPFGSSLDPLIKQAFEATVRTNVYVTENANIACVYII
LVGEMQEPIMPKPTELEQQLHSLPYWRTDGHNHLIINLSRKSETQNFIYNISTGRAMIAQ
STFYDVQYRPGFDMVVSPLVHAMSEPNFLEIPPQVPVKRKYLFSFQGEKIESLRSSLQEV
RSFEEEIEGNAPADYDDRIITTLKAVQDSKLDFVLVEFTCKNQPKASLPTEWALCGERND
RLDLLKLSTFALIITPGDTHLLISAGCTMRLFEALEVGAIPVILGEQVQLPYHDVIRWNE
AALIIPKPRITEVHFLLRSISDNDLLTMRRQGRFLWETYFSTSDNVFSTVLAIIRTRIQI
PAAPIREETAVEIPHRSGKAAGTDPNMADNGDLDLGPVETEPPYASPKYLRNFTLTAMDI
YRNWNSAPGPFHLFPHTPFDPVLPSEAKFLGSGTGFRPIGGGAGGSGKEFQAALGGNVPR
EQFTVVMLTYEREEVLMNSLERLNGLPYLNKVVVVWNSPKLPSEDLLWPDIGVPIMVVRT
EKNSLNNRFLPWDEIETEAILSIDDDAHLRHDEIMFGFRVWREARDRIVGFPGRYHAWDI
PHQSWLYNSNYSCELSMVLTGAAFFHKYYAYLYSYVMPQAIRDMVDEYINCEDIAMNFLV
SHITRKPPIKVTSRWTFRCPGCPQALSHDDSHFHERHKCINFFVKVYGYMPLLYTQFRVD
SVLFKTRLPHDKTKCFKFI
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgactgggtataccatgttgcggaatgggggagtggggaatggcggccaaccctgggtg
ttacgatggtccagtcggatccggcttacctggcttagctttaccctgttcatcatcctc
gtcttcttccccctcatcgcccactactacttgaccaccattgacgatgcggatgatgcc
ggcaagcgcatcttcggcccccgcaccgggaatgagctgtgtgaggtgaagcatgtccag
gacctgtgccgcatccgtgagtcagtcagcgaggagctgctccagctggaggccaagcga
caggagctcaacagcgagatcgccaagttgaacctgaaaatcgaagcctgcaagaagagc
atagaaaacgccaagcaggatctcctgcagctgaagaatgtcatcagccagactgagcat
tcctacaaagaactgatggctcagaaccagccaaagctctccttgccaatccggctgctg
ccagacaaagatgaagctaacttgcctttgccaaaatccaacaggaactgcaggctacac
aactgctttgactactcacgctgcccattgacgtctggcttcccagtgtatgtctacaac
agtgatcagtacccttttggtagctctttagaccctttaattaagcaagcctttgaggca
actgtcagaactaatgtttatgttactgaaaatgcaaacattgcttgtgtgtatataatt
ttagtgggggaaatgcaagagcccataatgccaaaacctactgaactagagcaacagttg
cactctttgccatattggaggactgatgggcacaaccatctcatcattaatttatcgagg
aaatcggaaactcagaactttatctataacatcagcacagggcgtgccatgattgcccaa
tccaccttttatgatgtacagtatcggccaggttttgatatggtggtatcgcctctagtc
catgcaatgtccgaacccaacttcctagagatcccaccccaggtgccagtaaagcgaaag
tacctattcagtttccagggagagaaaatagagtctcttcgatccagcttgcaagaggtt
cgttcgtttgaagaggaaatcgaaggcaatgccccagctgactatgatgatcgaatcatt
accaccttgaaggctgtccaagacagtaagttggactttgtcttagtggaattcacttgt
aagaaccagcctaaggcaagtctgcccactgagtgggctctttgtggagaaaggaatgac
agattagacctactgaagctatctacttttgcactgataatcacaccaggggacacccat
ctattgatctctgctgggtgtaccatgagactctttgaggctctggaagttggagccatc
ccagtgattcttggagagcaagttcagctgccctatcatgatgtgatccggtggaacgag
gcagccttaatcataccaaagccacgtatcacagaagtgcactttcttctgagaagcatt
tctgacaacgatctccttaccatgaggaggcagggccgcttcttgtgggagacctacttc
tccacctctgacaacgtgttcagcacagtcttagccatcataaggactcgaattcaaatc
ccggctgctcctattcgagaagaaactgcagtggagattcctcaccgctctggcaaagct
gctggtactgaccccaacatggcagacaatggtgacttagacctgggacctgtggaaaca
gaaccaccttacgcatctcccaaataccttcgcaattttactctcacagcaatggatatc
tacaggaattggaattcggctccagggcctttccacctctttccacacacaccctttgat
cccgttttaccttcagaagctaagttccttgggtctgggactggatttcgaccaattgga
ggaggagcaggtggttctgggaaagagttccaagctgccttgggtggcaatgtcccaagg
gagcagttcacagtagtaatgttaacctatgagcgggaggaagtgttaatgaactcccta
gagagactcaatggactcccttacttaaataaagttgtagtagtgtggaactcccccaaa
cttccgtccgaagacctcttgtggccagacattggtgtcccaatcatggttgtccgcaca
gaaaagaacagtctgaacaacaggttcctgccatgggatgagatcgagacagaggccatt
ctgtctatcgacgacgatgcccaccttcgccatgacgagatcatgtttgggttccgagtc
tggagagaggcaagggaccgcattgttggattccctgggcgataccatgcgtgggacatc
ccccatcaatcctggctctataactcgaactactcttgtgaactgtccatggtgctgact
ggtgctgccttctttcataagtactacgcctacctgtattcttacgtgatgccacaagcc
atccgtgacatggtagacgaatacatcaactgtgaggatattgccatgaactttctagtc
tctcacatcacaaggaaaccacccatcaaggtgacctcgcgctggaccttccgctgccct
ggctgccctcaggccctttcgcatgacgactcgcacttccacgagcggcacaagtgcatc
aacttcttcgttaaggtgtatgggtacatgcccctcctgtacacccaatttcgtgtggat
tctgtcctcttcaagacccgcctgccccatgacaagactaaatgcttcaaattcatttag
DBGET
integrated database retrieval system
