Trachemys scripta elegans (red-eared slider): 117875495
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Entry
117875495 CDS
T07347
Symbol
LAMA2
Name
(RefSeq) laminin subunit alpha-2
KO
K05637
laminin, alpha 1/2
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04510
Focal adhesion
tst04512
ECM-receptor interaction
tst04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117875495 (LAMA2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117875495 (LAMA2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117875495 (LAMA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_I
Laminin_N
Laminin_II
Laminin_G_3
PNM8A
DUF948
Tropomyosin
Motif
Other DBs
NCBI-GeneID:
117875495
NCBI-ProteinID:
XP_034622775
LinkDB
All DBs
Position
3:complement(108285559..108736257)
Genome browser
AA seq
3123 aa
AA seq
DB search
MARGSLCLLLLLGALASRCSSQAEQQQPPERRGLFPAVLNLAVNAIITTNATCGEKGSEM
YCKLVEHVPGQPARNPPQCRICDQNSRIPHRIYSPKSNIEGIKPEISTIFSLRPPSVFQI
AYVIVKAANAPRPGNWILERSLDGVNYQPWQYYAVTDTECLTRYNILPRRGPPSYAKDDE
VICTSFYSKIQPLENGEIHTSLINGRPSADDPSRVLLEFTSARFIRLRFQRIRTLNADLM
MFAHKDPSEIDHIVTRRYYYSVKDISVGGMCICSGHARACPLDPATNRSTCQCEHNTCGE
SCDHCCPGFNQKPWGAGTFLVKSECEECNCHGKTKECYYDQNIADRNQSLNIHGEYTGGG
VCINCTHNTAGINCETCTDGYFRPKGVLPDDPNPCQPCSCNPVGSLHATCVKDEKSAEGG
MLPGFCHCKTGYAGESCNRCALGYKGYPDCVACSCSVKGSLNDDPCIGSCICKENVEGEN
CDRCKPSFFNLQQDNPRGCEECFCSGKTNVCIDSHWTYSSVGDMSGWYLTDVPGLLQITP
QQDSFGGPQRLSISNVAARRVLPLIYYWSAPSPYLGNKIPAAGGHLKFTISYDLTGQEEA
VQTILQSDIIIEGAGLRISTSKEGIHLQPFEEHTEEVVLKPDLFTVHGTDSPVSKREFMT
VLANIKRLLIRATYSYGMSAIYRLSGVSLEAADRYSTGRKVASAVEVCQCPPGYGGTSCE
SCWPRHRRVNGTIFGGICEPCTCFGHAEFCDDLTGECMDCKYNTGGPYCDRCLPGFYGDP
TKGTNEDCQLCACPLTIPSNNFSPTCHLDRSHGLICDECPPGYAGPRCERCANGYFGQPL
IPGGSCRPCQCNDNLDFSIPGSCDSLSGACLICKPGITGQYCERCADGYFGDALDPKNCQ
SCHCNINGSFSEICNSQTGQCECKPNVVGRRCDECKPGTFGLQSSRGCVPCNCNSFGSKS
FDCDENGQCHCQPGVAGKKCDRCAHGFYNFEEGGCTPCECSHLGNNCDPVTGRCVCPPNT
IGEKCDKCAPNYWGHDIVSGCKACDCSVVGSLSFQCNSDTGCCSCHPKFSGDKCTQCRPG
YWRYPQCIPCDCLLAGTDPQTCDAEMEKCSCVDGTGQCSCKVNVEGVHCDRCRSGMFGLY
AKNPLGCNSCYCFGLTTRCSEAKGLIRMWLTLKPEQMVLPLVDENLQDSTTRGVVFQHPE
IVANIELVMQDLQSEPIYWKLPEQFEGRKLTAYGGKLKYAIYFEAREETGFATYNPQVII
RGGPPTRTRTIIRHMAAPLIGQLTRHEIEMTEHEWRYHGDDPRVSSTVTRDDFMNVLYNI
HYILIKASYGSIMRQSRISEISMEVAEEGNVSGMSPRAHLIEKCDCPLGYSGLSCEACSP
GFYRLPSRSSGRRPGPTLGTCTACQCHGHSNMCDPETSICQNCRHNTAGDHCERCAVGFY
GNVRGSPEDCHPCACPLTIPSNNFSPSCVAEGLSDYRCTACPPGYEGQYCERCSPGFSGD
PRTPGGSCQECECDPYGSLPIPCDPVTGQCTCKPESTGWTCAGCKHQHVRDGMECIFCDD
ECIGLLLSDLDRLNQMTLSVNLSGPLPPPYKMLYGFENTTQELKHLLSPQRAPERLLQLA
QKNLDTLVTEMDELLTRATKVTADGEQTGQDAERTNERAMSLGQFIKDMLQAAEAVNENA
VKLNETLRIQDKTLEKSLQALQSDIDRMMRELRRRKLNVQERAAQDELANAEALLNKVKK
LFGEPTEKNEELKNEVRDKMADYKNKVDDARDLLREASSKIREANRLSAINQRNMTVIEK
RKQAVESSRQEAEKTLKEGNDILDEASRLANEINLAVEYVENLGDKIQPIADELKDKIDD
LAQDIQDRMLPEKVLQAENHAAQLNESSAILDGILAEAKNVSFNATVAFKAYSNIKDYID
EAERIAREAKARANEAMQLTSGPQGSLKDGAKNSLQKSFRVLNEAKKIEKDVKENGDNLN
SMQNRLKNADEKNSDLLRALNDTFGKLAAIPNDTAAKVQAAKDKAGQANATANDVLARIK
DLNQNLLGLKNNYSKCADDVAKTNAVVKDSTKNIADADATVKTLEKEADRLLDKLKPVKE
LQDNLGKNISQIKELINQARKQANSIKVSVASGGDCIRTYRPEIKKGSYNTVIVNVKTAV
ADNLLFYLGSAKFTDFLAIEMRKGKVNFLWDVGSGVGRVEYPDLTIDDAFWYRIEASRTG
RNGTISVQALDGPKATIMPSTFSAVSPPGYTILDVDANAVLFVGGLTDKIKKSDAVRVTT
FTGCMGETYLDSKPIGLWNFRDTKGDCKGCAISPQVPDSEGTIQFDGDGYALVSRPVRWN
PNVSMVMFKFKTFSSSALLMYLATHDLKDFMSVELSDGHIKVSYDLGSGTTSAIGNQNHN
DGKWKSFTLSRIQKQANVSIVDIDTNQEEIIATSSTGSHFGLNLKADEKIYFGGLPTLRN
LSMKARPEVNLKKYAGCLKDIEISRTPYNILSSPDFVGITKGCTLENLYTVSFPKPGFME
LQPVSFDMGTEINLSFSTKNESGVILFGTAGTPIPPRRKRRQTGQAYYAVFLNKGRLEVH
ISTGIRDPRRITIKPESGDFHDGRAHSIRIERIKGMFTVQVDEDRSQTQRLPTDQSITVK
KLFVGGTPPHFHAAPIRNIPPFEGCIWNLVINAIPMDFAQPVSFKNADIGQCHTLEPEIR
LPEGEDEATPASVLIQPEPDGKEEKESTTATPRFSFSPPPPPSPSPPTRDSCAADTEPAI
LEGGKQFGLSRNSHIAAAFDDTKVKNRLTIEFEVRTEAESGLLFYMARINHADFATVQIK
NGLPYFSYDLGSGNTSTMIPNKINDGQWHKVKIFRTKQEGILLVDGVSNRTTSPKKADIL
DVVGMLYVGGLPINYTTRRIGPVTYSIDGCIRNFKMTEASVDLDNPTSSFNVGKCFTNAE
KGTFFDGTGFAKTVGTYKVGTDLLVEFEFRTTRMNGVLLGISSQKMDGLGIELVDEKLMF
HVDNGAGRFSAIYEPDKPGSLCDGQWHKVTANKIKHRLELTVDGNQVDRSNPNGVSSSAD
TNDPVFIGGYPDGLNQFGLTTNIRFKGCIRSLKLTKGTGKPQEIHFSRALELKGVQPLSC
PAN
NT seq
9372 nt
NT seq
+upstream
nt +downstream
nt
atggcacggggaagtttgtgtctcctcctgctcctcggcgcgctggccagccggtgcagc
agccaagctgagcagcagcagccgccggagcgaagaggattatttccagcagtgctgaac
ctggctgtcaatgctatcatcacaaccaatgctacctgtggagaaaaaggctctgaaatg
tattgcaaactagttgaacatgtacctggacaaccagcaagaaaccccccacagtgtcgt
atttgtgaccagaacagtaggattccacatcgtatttactctcccaaatccaacattgaa
ggcattaagccagaaattagcacgatattctccctccggcctccttctgtattccagatt
gcatatgttattgtgaaagcagctaatgcccctcgacctgggaactggattttggagcgt
tcactggatggtgttaactatcagccatggcagtattatgctgtaacagacacagaatgc
ctgacacgttacaacattcttccccgcagagggcctccatcctatgcaaaagatgatgaa
gttatatgcacttcattttactccaagattcaaccactggagaatggagagattcacaca
tcactgatcaatggacgacctagtgctgatgatccttcccgagtattgctggaattcact
tcagctcgctttattcgactgagatttcagaggatacggacactgaatgctgatttaatg
atgtttgcacacaaagatcccagtgaaattgaccacatagttacaaggaggtattactat
tctgtaaaagatatatctgttggaggcatgtgtatctgttctggccatgcaagggcttgt
cctttggatccagcaactaacagatcgacttgtcaatgtgaacacaacacatgtggagaa
agttgtgatcattgctgtcctgggtttaatcaaaagccctggggagctgggacgttcctg
gtcaagtctgagtgtgaagaatgcaattgtcacgggaagactaaggaatgttactatgat
cagaatattgcagacagaaatcagagtttgaatatccatggagaatacactggaggtgga
gtgtgtattaattgcacacacaacactgcaggcataaactgtgagacctgcactgatggt
tacttcaggccaaaaggggtattaccagatgaccctaacccgtgccagccatgttcctgt
aatccagttgggtctttacatgctacttgtgtcaaggatgagaaaagtgcggaaggaggc
atgctccctggattctgccactgcaagactggctacgcaggtgaaagctgcaatcgatgt
gctttgggttacaagggttatcctgactgcgtggcctgtagctgctctgtgaaaggcagc
ttgaatgatgacccttgtataggatcctgcatttgcaaggaaaatgttgaaggagaaaac
tgtgatcgttgtaaaccaagtttcttcaacctgcagcaagataatcccagaggctgtgag
gagtgtttttgttcagggaaaacaaacgtctgtatagactctcactggacctacagcagt
gtaggagacatgagtggctggtatctgactgacgtacctggtctccttcaaattacacct
cagcaggacagttttggtggacctcagcggcttagcatcagtaatgtggctgccagaaga
gtgctgccgctgatttattactggagtgcacccagcccttatttgggcaacaaaatacca
gctgctggagggcatctaaaatttaccatctcctatgacctcacagggcaggaagaagct
gttcaaacaatactgcagtctgatatcatcatagagggagctggcttaagaatcagcact
tcaaaggagggcattcacctacagccatttgaagaacacactgaagaagttgtgctgaaa
ccggacttatttactgtacacggcactgactctccagtcagcaaaagggaattcatgact
gtactggcaaatataaagaggctcctcataagagccacatacagctatgggatgtctgcc
atctacaggttgagtggggttagccttgaagctgctgatcgttattcaactggtaggaag
gtggcgtctgctgtggaggtttgtcagtgtcctccagggtatggtggtacctcctgtgaa
tcttgttggcctagacacagacgagtgaacggcactatttttggtgggatctgtgaacca
tgcacatgctttggtcatgcggagttctgcgatgacctcacaggagaatgcatggactgc
aagtacaatacaggtggcccatactgtgatagatgtcttcctggtttctatggtgatcct
actaaagggacaaatgaagactgccagttgtgtgcctgcccattaactataccttctaac
aactttagcccaacatgtcatttagaccgaagtcatggattaatatgcgatgaatgccct
cctgggtatgcaggaccacgctgtgagaggtgcgcaaacggctattttggacaaccttta
ataccaggaggatcatgccggccctgccagtgtaatgacaaccttgacttctccattcct
ggcagctgtgacagcttatctggagcttgcctgatatgtaaacctggtataacaggtcaa
tactgtgaaaggtgcgctgatggatattttggagatgctcttgatccaaagaattgtcaa
tcatgtcactgcaacatcaatggctcattttcagagatctgcaactctcagacagggcag
tgtgagtgcaagcccaatgttgtggggcgtcgctgtgatgagtgtaagcctgggacattt
ggtctacagtcgtctagaggatgtgttccctgtaactgcaattcgtttggttccaaatcc
ttcgactgtgatgagaacggacagtgccattgccagcctggcgtagcaggaaagaaatgc
gatcgctgtgctcatgggttttataactttgaagaaggaggatgcactccttgtgagtgt
tcccatcttggtaataattgtgatccagtcaccggccgctgtgtgtgccctcccaatacc
ataggagagaagtgtgataaatgtgcgccaaattactggggtcatgacattgtcagcggg
tgcaaggcctgtgactgcagtgtggttggatccctcagtttccagtgtaactcagataca
gggtgctgctcctgccaccctaaattctctggggacaaatgcacgcagtgcagaccggga
tattggagatacccacagtgcattccctgtgactgcttgctggcagggactgatcctcag
acttgtgatgcagagatggaaaaatgttcatgtgttgatggtacagggcaatgtagctgc
aaggttaacgtggaaggtgtccactgtgacaggtgcaggtctggaatgtttggactctat
gccaaaaacccacttggctgcaacagctgctattgctttggcctgactactcggtgcagt
gaggcaaaggggctgatccgcatgtggctgaccttgaagccagaacagatggttctgcca
ctggtagatgaaaaccttcaggacagtactaccagaggagttgtattccagcatccagag
atagtagctaacattgaactggtgatgcaagatctccaatcagaacctatttactggaaa
cttccggagcagtttgaaggacggaagctgactgcttatggagggaaactgaagtatgct
atctactttgaagcacgcgaggagacgggttttgctacctataatccccaggtcatcatc
agaggtgggccacccacacgtactagaactatcatccggcatatggctgcccctttgatt
ggccagctgacaagacatgagatagagatgacagagcatgaatggagataccatggtgat
gacccaagagtcagtagtactgtgacacgtgatgacttcatgaatgtgttgtacaacatt
cattacattcttattaaggcttcttatggcagcatcatgagacaaagcagaatttctgag
atatcgatggaagttgctgaagaaggcaatgtgtctggaatgagtcctcgtgctcacttg
attgagaaatgtgactgcccactgggctattctggcttgtcatgtgaggcctgttctccg
ggattttatagactgccttctagatcatctggcaggagacctggcccaaccctgggcacc
tgtactgcatgtcaatgccatggacatagtaatatgtgtgaccctgaaacctctatatgt
cagaactgcaggcacaacactgctggcgatcattgtgagaggtgcgcagttggattctat
gggaacgtccgaggatctccagaggactgccatccttgtgcgtgtcctctgaccattccc
agcaacaactttagtccttcttgtgttgcggaaggtctcagtgattaccggtgtaccgct
tgcccacctggatatgaaggccagtattgtgaaagatgttcccctggcttctccggtgac
ccaagaactccaggagggtcctgccaagaatgtgagtgtgatccatacggttcactgcct
atcccctgtgaccctgtcaccggacagtgcacttgcaaacctgaatccacagggtggact
tgtgcaggctgcaagcaccagcatgtgcgtgatggcatggagtgcattttttgtgatgat
gaatgcataggactccttctaagcgacttggatcgactaaaccagatgactctgagtgtc
aacctcagtggcccgctgcctcctccatataaaatgctgtatggctttgagaacacaaca
caggaattaaagcatttgctatcacctcagcgagcaccagagagactccttcagttggca
caaaaaaacctggatacccttgtgacagagatggatgagctattgacaagggctaccaag
gtgacggcagatggagaacaaaccgggcaggatgctgagaggactaatgagagagccatg
tctcttggacagttcatcaaggacatgctccaggctgcggaagctgtaaatgaaaatgct
gtaaaactgaatgagacactccgaatccaagataagaccctggagaaaagtcttcaggct
ctgcagagtgatattgatagaatgatgagagaactgaggagaagaaagttgaatgtgcaa
gaaagggcagcccaagatgagttagcaaatgcagaagcccttttgaacaaagtgaagaaa
ttatttggcgagcccacagagaaaaatgaggagctcaagaatgaggtcagggacaagatg
gcagattacaaaaacaaggttgacgatgctcgagacctgctgagagaagccagtagtaaa
attagggaggcaaatcgcttatctgcaatcaaccaaagaaacatgacagtgatagagaaa
aggaagcaagctgtagaaagtagcagacaagaggccgaaaaaacactaaaagaggggaat
gacatcttggatgaagccagccgtcttgcaaatgaaatcaatttagctgtggagtatgta
gaaaacttgggggataagatacaaccaatcgctgatgagctgaaggataaaatagacgat
ctagcccaagatattcaggataggatgcttccagaaaaggtgttgcaggctgagaaccat
gcagcccaactgaatgaatcatctgcaatattggatggaatccttgctgaagctaaaaat
gtctcattcaatgccactgtagctttcaaggcatatagcaatatcaaggactatattgat
gaagcagagagaatcgccagggaggccaaggcccgtgcaaatgaagctatgcaactgaca
tctggtcctcaaggatcactgaaggatggtgccaagaactcgcttcagaaaagcttcagg
gttcttaatgaggccaagaagatagaaaaggatgttaaagaaaatggggataacttgaat
agtatgcaaaacaggttgaaaaatgctgatgaaaagaattctgatctcctgagagctttg
aatgacacctttggaaagctggcagccattcctaatgatacagctgcgaaagtgcaagca
gctaaagataaagctggacaagctaacgccactgcaaatgatgtactggctaggattaaa
gacctcaaccagaaccttcttggcttaaagaacaactacagcaaatgtgcagatgatgtg
gccaaaacaaatgctgttgtgaaagattccaccaagaacattgctgatgcagatgccact
gttaaaaccctagaaaaggaagcagatcggctactggataaactcaaaccagtcaaagaa
cttcaggataatttggggaaaaacatctctcagataaaagaactgataaaccaagcccgg
aaacaggccaattctatcaaagtctctgtggcttctggaggtgactgtattcgcacgtac
agaccggaaataaagaaaggaagctacaacactgtcattgtcaatgtgaagacagcagta
gccgacaaccttcttttttatcttggaagtgccaaatttactgacttcttggccatagag
atgcgtaaaggcaaggtgaacttcttgtgggatgtgggatctggcgtcggacgggttgag
tatccagatctgaccattgatgatgcattttggtaccggattgaagcctctaggactgga
agaaatggcacaatttcagtacaagctctggatggtcccaaagcaaccatcatgccaagt
accttcagcgcagtctctccacctggttatactattctggatgtagatgcaaatgccgtg
ttgttcgttggtggtctaactgataaaattaagaaatcagatgctgtaagagtcactacc
ttcactggctgcatgggtgaaacttacttggacagcaagcccataggactgtggaatttc
agggatacaaagggtgactgcaaaggatgtgctattagcccacaggtgccagacagtgag
ggaactattcagtttgatggagatgggtatgctttggtgagccgcccagtccgctggaac
cccaatgtttctatggtcatgttcaagttcaagaccttctcttccagtgctctgctgatg
taccttgctacacatgacttgaaagatttcatgagtgtagagctcagtgatgggcatata
aaagtcagctacgatctaggttcaggtacaacttctgctattggcaaccaaaaccataac
gatgggaaatggaaatcgttcaccctctcaagaatccaaaaacaagccaatgtatcaatt
gtagacatagacactaatcaggaagagatcatagcaacatcttctacaggaagccatttt
ggtctcaacttgaaagctgatgagaaaatatattttggtggattgccaactctcagaaac
ctgagtatgaaagcaaggcctgaagtgaacttaaagaaatatgcaggctgcctcaaagat
attgaaatttcacgaacaccatataatatactgagcagccctgattttgttggcataacc
aaaggatgcacactggagaacctttacacagttagcttccccaaaccaggttttatggaa
ctgcagccagtctcatttgacatgggtacagaaatcaacctgtcctttagcaccaagaat
gagtctggggtcatcttatttggcacagcggggacacctatacccccgaggagaaaacgc
agacagactgggcaggcctattatgcagtgttcctgaataaaggtcgattagaagtgcat
atctccactggaatacgagatccacgcaggatcaccatcaagcctgaatccggcgatttt
catgacggtagagcacactccatccggatagaaagaatcaaagggatgtttactgttcaa
gtagatgaagacagaagccagactcagaggctacctactgatcagtctataacggttaaa
aagctctttgtgggagggaccccgcctcacttccatgctgcacctatcaggaacataccc
ccttttgagggttgcatatggaatcttgtcatcaatgccatccccatggactttgctcag
cctgtgtccttcaaaaatgcagatataggccagtgtcacactctagaacccgagatcaga
cttcctgaaggagaagatgaagctacccctgcttctgtcttgatccaacctgaacctgat
ggtaaagaggagaaagagagcacaactgccacccccaggttttctttctctcctcctcca
ccaccatcaccttcacctcctacacgtgactcttgtgctgctgatacagagccagctatt
ttggagggcggcaaacaatttggtctttcaaggaacagccatattgcagctgcatttgat
gataccaaagtgaagaacaggctcacaattgaatttgaagtccgaacagaggctgaatct
ggcttgcttttttatatggcccggatcaaccatgccgattttgccactgttcagataaag
aatggactgccttacttcagctatgacctgggaagtgggaacaccagcacaatgattcca
aacaaaatcaatgatggccagtggcacaaggtaaaaatatttcgaaccaagcaagaagga
atccttttagtagatggtgtttcaaacaggaccaccagccccaagaaggccgatatcttg
gatgttgtgggaatgctgtatgtcggaggattgcccattaactatacaacaagaagaatc
ggtccagtcacctacagcattgatggttgcatcagaaattttaagatgacagaggcttct
gttgacctggataatccaacctccagcttcaatgttggcaaatgctttaccaatgcagag
aaaggaacattctttgatggaacaggctttgccaaaacagttggaacatataaagtggga
acagacctactagtggagtttgaattccgtactactcgaatgaatggtgttctgctggga
atcagcagccaaaaaatggatggactcggcatcgagctggtagatgaaaaactgatgttc
catgtggataatggcgcaggcagattctctgccatctatgagcctgacaaaccaggcagc
ttgtgtgatggacagtggcacaaggttactgcaaacaagatcaagcaccgattagaattg
actgtggatgggaatcaggtggaccggagcaacccaaatggagtctccagttctgcggac
actaatgatcctgtcttcattggaggatatcctgatggtctgaaccagtttggcctgact
acaaatatccgttttaaaggctgcattcgctcgctgaagctcaccaaaggcactggtaaa
cctcaggagattcacttcagcagagccttggagctgaagggcgttcaacctctatcatgc
cctgcaaactaa
DBGET
integrated database retrieval system
