Trachemys scripta elegans (red-eared slider): 117875496
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Entry
117875496 CDS
T07347
Name
(RefSeq) vesicular inhibitory amino acid transporter-like
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117875496
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tst02000
]
117875496
Transporters [BR:
tst02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
117875496
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GFIT
Motif
Pfam:
Aa_trans
Dimer_Tnp_hAT
DUF5068
Motif
Other DBs
NCBI-GeneID:
117875496
NCBI-ProteinID:
XP_034622776
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Position
3:108780930..108818345
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AA seq
645 aa
AA seq
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MKTTDAIVNPKDAAEQHSIGQNETASLQLDPERLTGFLDFCMKQSNYDTLSRVIEQVAVI
DDGEVDLLRVNTAPKRNTKHKKTKKAFKTNAHKKWEMTVAHLLIPKMFGAKDSFWNAIQV
LHPFLKVNFAADYDCYSRMFQIFASKDEISNLNMPNPDNMKLDALAFWSSHQNTLPISSK
LARLVKWEGCLDADEENVNFARRDELNQTHSEEKEEQDATMTLEFNVSHQDPGYQSKAHM
QGAQIKLITTWEAGWNVTNAIQGIFVLGLPYALLHSGYSGLFLIILAAMFCCYTGKILIA
CLYEENEDGHLIRVRDTYEDIANACCKKRFPKLGGIVVNVTQVMELIMTCILYLVVSGNL
LSHSFPYLPVTEKTWSVIAFVTLLPCVFIKTLSIVSKLSLLCSLVHFIIIFIVMSYCLTQ
IHQWSWTRFRLSIEFEDFLVSVGVIIFSYTSQIFLPTLEGNMKNPKEFSCMLNWTHFFAC
LFKTAFALTAFLTWGEETKEVITDNLPASLKTLVNLCFLAKALLSYPLPFFAVTEILHAC
ISSSNHSDYRAPLFIVVLRGLALLFTLLMAMFIPHFALLMGLTGSVTGAAMTFLLPSLFH
LKLKWGTLAFLEKGAAISLFIVGFLCSLAGIVCSIKGLIEAVGGM
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaacagacgctatagtcaatccaaaagatgccgcagaacagcattccataggc
caaaatgagaccgcctctctgcaactggacccagagaggctaacaggcttcttggatttc
tgcatgaagcaaagtaattatgatactttgagccgggtcattgaacaagtagcagtgata
gacgatggggaagtggatctcctgagggtgaacacagcaccaaaaagaaacacaaaacac
aagaaaaccaaaaaagcattcaaaaccaatgctcacaagaaatgggagatgactgtagcc
catttactgatccccaaaatgtttggtgccaaagattctttttggaatgccatccaggtg
ttgcaccccttcctcaaggtgaattttgcagcagactatgactgttattccagaatgttt
caaatatttgccagtaaagatgaaatctcaaatctgaacatgcctaaccctgataatatg
aagctagatgcgctggctttttggagcagtcatcaaaacacacttcccatctccagcaaa
ttggcaaggctggtgaaatgggaaggttgcctagatgctgatgaagaaaacgtgaatttt
gccagaagggatgagcttaaccagacccacagcgaggaaaaagaggaacaagatgccacc
atgacccttgagtttaatgtctcccaccaggatccaggatatcaatccaaggctcacatg
caaggtgcccagatcaaactgatcaccacttgggaagctggatggaatgttaccaatgcc
attcagggaatttttgttctaggattgccatatgctcttctccacagtggatacagtggg
ctgtttcttattatcctggctgcaatgttctgctgctatactggcaaaattctaatcgct
tgcttgtacgaagaaaatgaagatgggcacctcataagagtgagagacacatatgaagac
attgctaatgcctgctgtaaaaagcgatttcccaaactaggtggcatagttgtcaatgtg
acccaggtgatggaactgatcatgacgtgcattttgtatctggttgttagtgggaacttg
ctgtcacatagttttccatatttaccagtgacggagaaaacttggtctgtaattgcgttt
gtaacattgctgccttgtgtgtttatcaaaactctcagcattgtttccaaactcagcctg
ctttgctccttagtccatttcattatcatcttcatagtgatgagttactgtctgacacaa
atacatcagtggtcttggacaagatttagactctccattgagtttgaggatttcctggtc
tcagtgggggtgatcattttcagttacacttcacaaatatttcttcctactcttgaaggg
aacatgaaaaacccaaaggaatttagctgtatgttgaactggactcacttttttgcttgt
ctcttcaagacagcctttgcactgactgcattcctgacctggggtgaagagacaaaggaa
gttattactgacaacctgccagcatccctgaaaaccctggtgaatttgtgcttcttagcc
aaggctcttctgtcttacccattgcccttttttgcagtcacagaaatactgcatgcttgc
atatctagcagtaatcattctgattacagagcccctctgtttattgtagttttaagaggc
ttggccctcttgtttactctgctgatggccatgttcataccacattttgctctgctgatg
ggtttaacaggcagtgtaacaggtgctgctatgacttttcttcttccttctcttttccac
ttaaaacttaaatggggaacgttagcgttcctggagaaaggtgcagccatttctcttttt
attgtgggtttcctttgcagcttagcaggtatagtctgctcaataaaagggctgattgaa
gcagttggaggaatgtag
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