Trachemys scripta elegans (red-eared slider): 117875762
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Entry
117875762 CDS
T07347
Name
(RefSeq) small nuclear ribonucleoprotein F-like
KO
K11098
small nuclear ribonucleoprotein F
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117875762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117875762
03041 Spliceosome [BR:
tst03041
]
117875762
03032 DNA replication proteins [BR:
tst03032
]
117875762
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
117875762
Spliceosome [BR:
tst03041
]
Complex A
U1 snRNP components
Sm proteins
117875762
U2 snRNP components
117875762
Complex B
U1 snRNP components
117875762
U4/U6.U5 tri-snRNP components
117875762
Complex C
U2 snRNP components
117875762
DNA replication proteins [BR:
tst03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
117875762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
117875762
NCBI-ProteinID:
XP_034623020
LinkDB
All DBs
Position
4:complement(122226345..122226614)
Genome browser
AA seq
84 aa
AA seq
DB search
MSLPLNRKPFLNGLQGKPVMVKLKWGMEYKGYRVSVDGYTNMQLANTEEYIGGALSGHLG
EVLISCNHVLCIRGVEEEDGEVRE
NT seq
255 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgcccctaaaccgcaagcccttcctgaatgggctgcaggggaagccggtgatg
gtgaagctgaagtgggggatggagtacaagggctaccgggtgtctgtcgatggctacacg
aacatgcagcttgcaaacacagaagaatacataggtggtgcattgtcaggacacctgggt
gaagttttgataagctgtaaccacgtcctgtgcatcagaggagtagaagaagaagatgga
gaagtgagagaataa
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