Trachemys scripta elegans (red-eared slider): 117875794
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Entry
117875794 CDS
T07347
Symbol
NFASC
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117875794 (NFASC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tst04515
]
117875794 (NFASC)
Cell adhesion molecules [BR:
tst04515
]
Immunoglobulin superfamily
L1 family
117875794 (NFASC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
Ig_5
V-set_CD47
C2-set_2
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
117875794
NCBI-ProteinID:
XP_034623086
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All DBs
Position
4:complement(124020508..124208504)
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AA seq
1340 aa
AA seq
DB search
MVMQQYLLTYTGVVFALYLHHIIRAIEVPLDPNIQNELPQPPTITKQSVKDYIVDPRDNI
FIDCEAKGNPIPTFSWTRNGKFFNVAKDPKVSMQRRSGTLVIDFRGGGRPEDYEGEYQCS
ARNEYGTALSSKILLQVSRSPLWPKEHLDLVEIDEGSPLTLKCNPPPGLPPPVVFWMSSS
MEPIHQDKRVSQGQNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTLKIQTKNPH
NETSFRNHTDMYSARGVMETTPSFMYPYGTSSNQIVLRGVDLLLECIASGVPAPDIMWHK
KGGELPTDKTKLENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDE
PQNLILAPAEDGRLVCRANGNPKPTIQWLVNGEPIESAPPNPSREVAGDTIVFRDTQIGS
SAVYQCNASNEHGYLLANAFVSVLDVPPRILAPRNQLIKVIQYNRTRLDCPFFGSPIPTL
RWFKNGQGSALDGENYQRHENGSLEINMARKEDQGIYTCVATNILGKAENQVRLEIKDPT
RIVRGPEDLIVKRGSLVRLDCRIKHDSTLKLTVTWLKDDTPLYIGNRMKKEDDGLIIYGV
AEKDQGDYTCVASTELDKDSAKAFLTVLAVVSAPTNRMTALPKERPERPRDLELTDLAER
SVRLTWIPGDDNNSPITDYVVQFEEDKFQPGLWHNHSRYPGSVNSAVLRLSPYVNYQFRV
IAVNEVGSSLPSLPSERYHTIGASPEINPTGVQGAGTQKNNMEITWTPLNATQAYGPNLR
YIVKWRQRESRESWSNETVRTTRHVVWNTPIYVPYEIKVQAENDFGRAPEPDVIIGYSGE
DYPKAPPTDIRLKVINSTAISLQWSRVYPDTIQGQLKEYRAYFWRESSLLKNLWVSKKRQ
SVGFVGDRPRGIVSRLFPYSNYKLEMVVVNGRGDGPRSEIKEFTTPEGVPSVPRYFRIRQ
PNLETITLEWGHPEHPNGIITGYNLRYQAFNGTKTGRTLVETFSPNQTRFTLQRTDPISR
YRFFLRARTQVGDGESIVEESPAPLNEATPTPAATSLPTTTVSLTSTTTIATTTTTAATT
TTTVASTTTTTESAPTATIKQDFATNGSSIWNVKAFTNSNWANITWSHNFSAGTDFVVEY
ITSNNTVRSIPVKAQTPSSVQLADLTPGMTYQLWVFPKWSSPSENSYITFTTSSAYTKNH
VDIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPVREKVEVLDHEDHKVDDPSFDY
RSLESDEDNKEPPGSHTSLDGTIKQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKDKEE
TEGNESSEATSPVNAIYSLA
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atggtaatgcaacagtacctcctaacctacacaggagtagtgtttgctctgtaccttcat
catatcatcagagccatcgaagttcccctggatccaaatattcagaatgaattgcctcag
cctcccacgattacaaagcagtctgtgaaggattatattgtagacccaagggataacatc
ttcattgactgtgaagccaaagggaaccccattcctactttttcttggacacggaatggg
aagttcttcaatgtggccaaggacccgaaggtctcgatgcaacgcaggtcggggacgctg
gtcatcgacttccgcggcggtgggaggccggaggattatgagggggaataccagtgctct
gctcgaaacgagtacgggacagcgctctccagcaaaatcctcctgcaggtttccaggtct
cccttgtggccaaaggaacatttggaccttgtagagatcgatgaaggatccccactgact
ttaaaatgcaacccaccccctgggctgccgcctcctgttgtcttctggatgagcagctcc
atggagccaatccaccaagacaagcgcgtctcccagggccagaacggcgacttatacttc
tccaacgttatgctgcaggacgcccaaactgactacagctgtaacgcgcgcttccacttc
acccacaccatccagcagaaaaacccttacacgctcaagatccaaaccaagaatccccat
aatgaaacgtcttttcgaaatcacactgacatgtacagtgcccgaggggttatggaaacg
acccccagcttcatgtatccctacgggacctcaagcaaccagatagtgctgagaggggtc
gacctcttactcgagtgcattgcttcaggagtaccagcaccagatatcatgtggcacaag
aaaggaggagagctcccaacagacaaaaccaagttggaaaattttaacaaggcccttcgc
atcaccaacgtctctgaggaagactctggggaatacttctgcttagcgtccaacaaaatg
ggcagcatccgccacactatctcagtgagagtgaaggcggccccttactggttggacgaa
ccacagaaccttattttggcccccgctgaggatggtagactcgtgtgtcgagccaacggg
aacccgaagcctacaatccagtggctggtgaacggagagcccatagaatctgctcctccc
aacccaagtcgggaagtggccggagacaccattgtatttcgggatacccagattggcagc
agtgccgtgtaccaatgtaacgcttccaacgaacatggctaccttctggctaatgccttc
gtcagcgttctggatgtgcctccccggattcttgccccacggaaccagctgatcaaagtg
attcagtacaacaggacccgccttgactgcccgttctttggctccccgatccccactttg
cgctggtttaagaatggtcagggaagcgccctggatggagagaactaccagaggcatgaa
aatgggagcttggaaataaacatggctcggaaggaagaccagggaatctacacctgcgtc
gccaccaacattctgggtaaagcagagaaccaggttcgtttggagatcaaagacccaact
aggatcgtgagagggccagaagatctgattgtaaagaggggctccctggttcgattagac
tgccgtataaaacatgactctacgctgaaactcacagtcacctggctgaaagatgatacg
cctctgtacattggaaacaggatgaagaaggaagatgacggtttgataatctatggcgtg
gctgaaaaagatcaaggagattatacgtgtgtagccagtactgaactggacaaagactct
gccaaagcattcctcaccgtgctagctgtcgtgtctgctccaactaatcgtatgacagcc
ttacccaaagaacgacctgagcggcctcgtgacctggagctgacagacctggcggaaagg
agtgtgcgcttgacatggatacccggtgatgacaataacagcccgatcacagattacgtg
gttcagtttgaagaggacaagttccaacctgggttgtggcataaccattcccgttaccca
gggagcgtgaactcagctgttctgcgcctctcgccctatgtcaactaccagttccgagtg
atagctgtgaacgaagtggggagcagcctgcccagccttccctctgaacgataccatact
attggggcaagtccagaaatcaacccaacaggagttcaaggagcagggactcagaaaaac
aacatggagataacttggacaccactgaatgcgactcaagcttatgggcccaacctcagg
tacatagtgaagtggaggcaaagggaatcacgggagagctggagcaatgagacagtgaga
accacaaggcatgttgtctggaatacacccatctatgtgccctatgagatcaaagtgcaa
gcagagaacgacttcgggagagctccagagccagacgttatcatcggctactcaggggaa
gattatcccaaggctccccccactgatattaggctaaaagttataaacagcacggcaatc
agtctccaatggagccgagtatacccggataccatccagggacaacttaaggaatacaga
gcctatttctggagagaaagtagtttgctgaagaacctgtgggtctccaaaaaaaggcag
tctgtgggttttgttggagaccgaccaaggggcatagtgtcccggctgtttccttacagc
aactacaaactggagatggttgtagtcaacgggagaggagatgggcctcggagtgaaatt
aaggagttcacaacacctgaaggagtacccagtgtccccaggtatttcagaatccgacag
cctaacctggaaaccatcactttggaatggggccaccctgaacatcccaatggaattatc
actggatacaaccttagataccaagcctttaatggaaccaaaacgggcagaacgctggta
gagaccttctcccccaaccaaacaaggtttacgctccagaggacagaccccatatcgcgc
tatagattcttcctgcgtgctaggacacaggtgggagatggagaatccattgtggaagag
tcaccagccccactgaatgaagccactccaaccccagctgcaacctcgttgcctacaact
acagtcagtctaaccagcactacaaccatcgccacaaccaccaccacagctgccacaacc
actacaaccgtcgccagcactacaaccactacggagagtgctccgacagccaccattaag
caggactttgccacgaatggatcatccatatggaacgtaaaagctttcactaacagtaac
tgggcaaacatcacctggagccacaatttttctgctggaactgactttgtggttgagtat
atcaccagtaacaatacagtgagatctatccctgttaaagctcagaccccttcctctgtg
cagctggctgacctgacccccgggatgacgtaccagttgtgggtttttcccaaatggtct
agccccagcgaaaactcttacataacctttacgacaagctcagcttataccaagaaccac
gtggacattgcaacccagggctggtttattgggctgatgtgtgccattgcgcttctggtt
ctgattttgttgatagtgtgcttcattaagagaagcagaggcgggaaatatccagtgcgt
gaaaaagttgaagtcctagatcatgaagaccacaaagtagatgatccatcatttgactac
aggtctcttgaaagcgatgaagacaacaaggaaccaccaggcagccacacctccttggac
ggcaccataaagcaggaaagcgacgatagcttggtagattatggagaggggggcgaaggg
cagttcaacgaggacggctcctttattggccagtacacagtcaagaaggacaaggaggag
acagaaggcaacgagagttcggaagccacatcccccgtcaatgctatctactccctggcg
taa
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