Trachemys scripta elegans (red-eared slider): 117875828
Help
Entry
117875828 CDS
T07347
Name
(RefSeq) acidic mammalian chitinase-like
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00520
Amino sugar and nucleotide sugar metabolism
tst01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
117875828
Enzymes [BR:
tst01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
117875828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_18
CBM_14
Motif
Other DBs
NCBI-GeneID:
117875828
NCBI-ProteinID:
XP_034623206
LinkDB
All DBs
Position
4:125555067..125563158
Genome browser
AA seq
486 aa
AA seq
DB search
MAKLMLLTGLALLLNAQIGSAYLLTCYFTNWGQYRPGLGKFKPDNIDPCLCTHLIYAFAG
MSNNQITTIEWNDVTLYKSFNGLKNQNGQLKTLLAIGGWNFGTAPFSAMVSTPQNRQTFI
NSVITFLRQYEFDGLDFDWEYPGSRGSTAQDKALFTVLVQEMLEAFEQEAKQINKPRLLV
TAAVAAGLSNIESGYQIPQLGQYLDYFHVMTYDFHGSWEGYTGENSPLYKGPVDTGSNVY
FNVDYAMNYWKDNGAPAEKLIVGFPTYGHTFILSNPSNTAVGAPASGPGPAGPYTRQSGF
WAYYEICTFLKNGATQAWDTPQDVPYAYKGNEWLGYDNIKSFNIKAQWLMKNNFGGAMVW
SLDLDDFTGTFCNQGKFPLINTLKTALGLQSTSCTAPAQPISPITEAPSSGSGSGSGSSG
SNPSSGSGSSPSSSGGTGFCASKASGLYPDPSNSNSFYHCVNGKTYLQNCQAGLVFDSSC
SCCNWA
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggccaagttgatgcttcttaccggtttggcactcctgctgaatgcacagataggctct
gcttatctgctgacatgttatttcaccaactggggccaatatagaccaggccttgggaag
ttcaaacctgacaacattgacccatgcctgtgtactcacctgatctatgccttcgctgga
atgtccaacaatcagatcaccaccattgaatggaatgatgtgacactctacaaatccttc
aatggcttgaaaaaccagaacggacaactgaagactctcctggctatcggaggctggaat
ttcggaacagcaccatttagtgcaatggtttccacacctcaaaaccgccagaccttcatc
aactctgtcatcacattcctgcgccagtatgaatttgacggactggactttgactgggaa
taccctggctccagaggcagcacagctcaggacaaggctctcttcaccgtcctggtccag
gaaatgctggaagccttcgagcaggaagccaagcagattaacaaacccaggctcctggtg
acggctgctgtggctgcagggctctctaacattgagtcaggctaccagattcctcagctc
ggccagtatctggactacttccatgtgatgacctacgacttccatggctcctgggaagga
tacactggcgagaacagccctctctacaaaggcccggttgacaccggtagcaatgtctac
ttcaatgttgattatgccatgaattactggaaggacaacggtgctccagctgagaagctc
attgttggattcccaacctacggacacaccttcatcctgagcaacccatccaacactgct
gtcggtgctccagcctcaggaccagggcctgctggaccttacacaagacaatctgggttc
tgggcttactatgagatctgcactttcctgaagaatggagccacccaggcttgggatact
cctcaggatgtcccctatgcctacaagggcaatgagtggcttggatatgacaacatcaag
agcttcaacatcaaggctcagtggctgatgaagaataactttggaggcgctatggtttgg
tctctggacctggatgacttcactggcacgttctgcaaccagggcaaattccccctgatc
aacactctgaagaccgctcttggactgcagagcactagctgcaccgcccctgctcagccc
atttctccaatcacagaagctcccagtagcggaagtggaagcgggagtggcagttccggt
agcaaccccagcagtggttcaggcagcagcccaagcagctccggtggcactggcttctgt
gctagcaaggccagtggcctctatccagatccatctaacagtaacagcttctaccactgc
gtgaatgggaaaacctacctgcaaaattgccaggctggcctggtcttcgactccagctgc
tcctgctgcaactgggcatga
DBGET
integrated database retrieval system
