Trachemys scripta elegans (red-eared slider): 117875876
Help
Entry
117875876 CDS
T07347
Symbol
PACSIN1
Name
(RefSeq) protein kinase C and casein kinase substrate in neurons protein 1
KO
K20123
protein kinase C and casein kinase substrate in neurons protein
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117875876 (PACSIN1)
Membrane trafficking [BR:
tst04131
]
Endocytosis
Bin/Amphiphysin/Rvs (BAR) family proteins
F-BAR proteins
117875876 (PACSIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCH
SH3_9
SH3_1
SH3_2
DUF7812
Sec10_N
GMIP-like_FCH
Motif
Other DBs
NCBI-GeneID:
117875876
NCBI-ProteinID:
XP_034623314
LinkDB
All DBs
Position
4:127654514..127714795
Genome browser
AA seq
445 aa
AA seq
DB search
MSGSYDESAAAAEEITDSFWEVGNYKRTVKRIDDGHRLCNDLMNCVHERAKIEKAYAQQL
TDWSKRWRQLIEKGPQYGSLERAWGAMMTEADKVSELHQDVKNSLLNEDFEKVKNWQKDA
YHKQIMGGFKEAKEADDGFRKAQKPWAKKMKEVETAKKAYHLACKEEKLAMTREANSKAE
QSITADQQKKLQDKVEKCKQDVQKTQEKYEKVLEELNKCTPQYMESMEQVFEQCQQFEEK
RLIFLKEVLLDIKRHLNLAESSSYTNVYRELEQTIRVADAQEDLRWFRSTNGPGMPMNWP
QFEEWNPDLTHTITRREKIKKNEGVTLTNATAVGESAAVAGDRGSVSSYDRSQPYTTEWS
DDEGGNSFSASEANGGANPFEEEPVGKGMRVRALYDYDGQEQDELSFKAGDELTKLGEED
EQGWCKGRLDNGQLGLYPANYVESI
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggctcctacgatgagtctgcggcggctgcggaggaaataaccgacagcttctgg
gaggtggggaactacaaacggacagtgaaacggatagacgacgggcaccggctctgtaat
gacctcatgaactgcgtccacgagcgggccaagatcgagaaggcctacgctcagcagctg
accgactggtccaagaggtggaggcagctgatcgagaaaggcccgcagtacggcagcttg
gagagggcgtggggagccatgatgacagaggcggacaaggtgagcgagctgcatcaggat
gtgaagaacagcctgctgaacgaggactttgagaaggtgaagaactggcagaaggacgct
taccacaagcagatcatgggaggcttcaaggaggccaaggaggcagacgatggcttccgg
aaagcgcagaaaccctgggccaagaaaatgaaggaggtggagacggccaagaaagcatat
cacctggcatgcaaagaggagaagctggcaatgacccgggaagccaacagcaaggcagag
cagtccatcactgcagaccagcagaagaagctccaggacaaggtggaaaagtgcaagcaa
gatgtgcaaaagacccaagagaaatacgagaaggtgctggaggagctgaacaagtgcacc
ccacagtacatggagagcatggagcaggtgttcgagcagtgccagcagttcgaggagaag
aggctcatcttcctgaaggaggtgctgttggacatcaagcggcacctgaacctggctgag
agcagcagctacaccaacgtctaccgcgagctggagcaaaccatccgcgtggcagacgcg
caggaggacctcaggtggttccgcagcactaatggcccggggatgcctatgaactggccc
cagtttgaggagtggaacccggacctcacgcacacgataacgaggcgagagaagattaag
aagaacgaaggggtgaccctgaccaatgccactgcagtgggcgagtcagcagcagtggcc
ggggaccgcggcagcgtgagcagctacgaccgcagccagccctacaccactgagtggtcg
gacgacgagggcggcaactccttcagtgccagcgaggccaatggcggcgccaaccccttt
gaggaggagccggtagggaagggaatgcgtgtgcgagctctgtatgactacgacgggcaa
gagcaggatgagctgagcttcaaagcgggcgacgaattaaccaaattaggtgaagaagat
gaacaaggatggtgcaaagggcgtctagacaatgggcagctcggcctttacccagccaac
tatgtggagtctatctaa
DBGET
integrated database retrieval system
