Trachemys scripta elegans (red-eared slider): 117876076
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Entry
117876076 CDS
T07347
Symbol
BRF1
Name
(RefSeq) transcription factor IIIB 90 kDa subunit
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tst03021
]
117876076 (BRF1)
Transcription machinery [BR:
tst03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
117876076 (BRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
BRF2-like_C_cyclin_rpt
RB_B
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-GeneID:
117876076
NCBI-ProteinID:
XP_034623725
LinkDB
All DBs
Position
4:16583166..16813347
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AA seq
681 aa
AA seq
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MPGGRVCAVCGGSEIEVDAARGDAVCTGCGSVLEDNIIVSEVQFVENSGGGSSAVGQFVS
LDGAGKTPSLGGGFHVNLGKESRAQTLQNGKRQIHHLGNQLQLNQHCLDTAFNFFKMAVS
KHLTRGRKMTHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGKTFLLLARELCINAP
AIDPCLYIPRFAHMLEFGDKNQKVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARM
HDFRRTVKEVIRVVKVCESTLRKRLTEFEDTPTSQLTIDEFMKIDLEEECDPPSFTAGQR
KLKIQELEKALSKKLEDVEGEISIYQDEIENELENSRPKAKGVFANLTKDESIEDNTASV
FGEEEAEDEELEAAANHLNKDFYNELLDKDRLKKNEGRECKNGNETPVWPPALESLLGPL
PTAASLGITESIQDCISTKDRDHNENTGDGELDLSGIDDTEIDRYILDETEAQIKAELWM
KENADYLKEQKEKEARIAKEKELGIYKEHKPKKSAKKREPIQASTAGEAIEKMLEQKKIS
SKINYNVLKDLNSKGSSTPKKEDDSTDDSSNTKKLSRRKSTASRNIANTVNSMGKRLRPL
ISTQLAKKAATEEVTFPDSQTEGPELEKPENVLVESGPVSYNHDEEAEEEEIEEEDDHCM
SALQLMGGNDYGCDMDDDDGY
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgccgggcgggcgggtgtgcgccgtgtgcggcggctcggagatcgaggtggacgcggcg
cggggggacgcggtgtgtacgggctgcggctcggtgctcgaggacaacatcatcgtctcc
gaggtgcagttcgtggagaacagcggcggcggctcctcggccgtggggcagttcgtgtct
ttggacggtgccggtaaaacaccatcattaggaggaggattccatgtcaatttgggaaag
gaatcgcgcgcacagactctccagaatgggaaacgtcaaattcatcacttgggaaaccag
ttgcaactcaaccagcattgtcttgataccgcctttaactttttcaagatggcggtgagc
aagcacttaacccgtgggagaaagatgacacatgtaattgctgcatgtctctacttggtg
tgtagaacagaaggaacgcctcacatgttacttgacctcagtgaccttcttcaggtgaat
gtctatgtgctgggaaaaactttccttctgctggccagagagctctgcataaatgctcca
gctatagatccatgtttatatattcctcgttttgcgcacatgctagaatttggagataag
aaccagaaggtatcaatgacagctctaagattattacagaggatgaaaagagactggatg
cacacaggacgccgaccatcggggctctgtggagcagctcttctagtggcagcaagaatg
catgatttccgacgtactgttaaagaggttatcagagtggtcaaggtttgtgagtcaacg
ttaaggaaaaggcttacagaatttgaagatacaccaacaagtcagctaacgatagatgaa
tttatgaagattgacttggaagaggagtgcgatcctccttcatttactgctggtcaaaga
aaattaaagatacaggagcttgagaaagcgctgtcaaaaaagcttgaagatgttgaaggt
gaaatatcaatttaccaagatgaaatagagaatgaattagaaaatagtaggccaaaggca
aaaggagtatttgccaatttgactaaagatgaatctatagaagataatacggctagtgta
tttggagaggaggaggcagaagatgaagaactggaagcagctgctaatcatttaaacaag
gacttttataatgaacttctcgataaagatagattaaagaaaaatgaagggagagaatgc
aaaaatggaaatgaaactcctgtatggccacctgcattagaatctctgcttggcccactc
cccactgctgccagccttgggataacagaatctatacaagactgtatatccactaaggat
cgagaccacaatgaaaatacaggagatggtgaactagatcttagtggaattgacgacact
gaaatagataggtatatacttgatgaaacggaagctcaaataaaagcagaactgtggatg
aaagaaaatgcggattatttgaaggaacaaaaggagaaagaagcaagaatagcaaaagag
aaggagcttgggatttataaggaacacaagccaaagaagtctgcaaaaaagcgggagcca
attcaagctagcacagcaggagaggcaattgaaaagatgttggaacagaagaaaatctca
agtaaaattaattataatgtgctaaaggacctgaacagcaaaggaagtagcacaccaaag
aaagaggatgacagcaccgatgacagcagcaacaccaagaagctgtcaagaagaaaatcc
actgccagtaggaatatagccaacactgtaaacagtatgggaaagagattaagacccttg
atttctacacaactagctaaaaaggctgcaactgaagaggtaacctttccagattcacag
acagaagggccagagcttgaaaaaccagagaatgttctggtagagagtggaccggtatca
tataaccatgatgaagaagctgaagaagaagaaatagaagaagaggatgatcactgcatg
agtgcacttcagttaatgggaggaaatgattacggctgtgacatggacgatgatgacggt
tattag
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