Trachemys scripta elegans (red-eared slider): 117876161
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Entry
117876161 CDS
T07347
Symbol
PAPOLA
Name
(RefSeq) poly(A) polymerase alpha isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117876161 (PAPOLA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117876161 (PAPOLA)
Enzymes [BR:
tst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
117876161 (PAPOLA)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
117876161 (PAPOLA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Polbeta
Motif
Other DBs
NCBI-GeneID:
117876161
NCBI-ProteinID:
XP_034623904
LinkDB
All DBs
Position
4:complement(26900419..26982053)
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AA seq
740 aa
AA seq
DB search
MPFPVTNQGSQQTQQLQKHYGITSPISLAAPKEIDCILTQKLIDTLKPFGVFEEEEELQR
RILILGKLNNLVKEWIQEISEIKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVA
PRHVDRSDFFTSFYEKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPE
DLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNI
LGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVW
DPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSK
LFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQS
FPAPKENPDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEMD
MKIAAMHVKRKQLHQLLPNHVLQKKKKHSTEGVRLTVLNDSSLDLSMDSDNSTSVPSPTS
AMKTSPLNSSGSSQGRSSPAPAVTAASVTNIQASEVTVPPTISSESSGGTSSESIPQTAT
QPAISPPPKPTISRVVSSTRLANQSPRPSGNTATKIPSPVVGVKRTSSPHKEESPKKIKT
EEDEINEDASCLDMSDHDKMETKEQLDAEANISSQTETVQTVASLQAPQKTPSTDLSDIP
ALPANPIPVIKNSIKLRLNR
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgccgtttccagttacaaaccagggatcacaacaaacacagcaactacagaagcattat
ggcattacctcacctatcagtttggctgcccccaaggagattgactgtatacttacccag
aaattaattgataccctaaagcccttcggtgtgtttgaagaagaggaggaactgcagcgc
aggattctaattttggggaagttaaataatctggtaaaggaatggatacaggaaatcagt
gaaatcaagaatcttccacaatctgtaatagaaaatgttggaggaaaaatttttacgttt
ggatcctaccgactaggggtgcacacaaaaggagctgatattgatgcattgtgtgttgca
ccaaggcatgttgacaggagtgactttttcacctcattttatgaaaaactgaaactacag
gaagaagtaaaagacttaagggctgttgaagaggcgtttgtcccagttatcaaactgtgt
tttgatgggatagagattgatattttgtttgcaagattagcactgcagactattcctgag
gatttggaccttcgagatgatagcctacttaaaaatttagacattagatgcatacgaagt
cttaacggttgcagggtaaccgatgaaattttacatctagtaccaaacatcgacaacttc
aggttaacactgagagctatcaaactgtgggcaaaacgccacaacatctattccaatata
ctaggtttccttggtggtgtttcctgggctatgttagtagcaagaacttgccagctttat
ccaaatgcaatagcatcaactcttgtacataaatttttcttggtattttctaaatgggaa
tggccaaatccagtgctattgaaacagccagaagaatgcaatcttaatttgcctgtatgg
gacccaagggtaaatcccagtgataggtaccatcttatgcctataattacaccagcatac
ccacagcagaactctacctacaatgtgtccgtttctacacggatggtcatggttgaggag
tttaaacaaggtcttgctatcacagatgaaattttgctgagtaaggcagagtggtccaaa
ctttttgaagctccaaacttctttcaaaagtacaagcattacattgtacttctagcaagt
gcaccaacagaaaaacagcgactagaatgggtgggcttggtggagtcaaaaatccgtatt
ctagttggaagcttggaaaagaatgagttcattacactggctcacgtgaatcctcagtca
ttcccagcacccaaggagaatcctgacaaggaagaatttcgtacaatgtgggtgattggt
ttagtgtttaagaagacagaaaattctgaaaatctgagtgttgatcttacatacgacatc
cagtctttcactgacacagtttataggcaagcaataaacagcaagatgtttgagatggat
atgaaaattgctgcaatgcatgtaaaacgaaagcaacttcatcaactactacctaatcat
gtgcttcagaaaaagaaaaagcattcaacagaaggggtcagactgacagtcctgaatgac
agcagcttagacttatctatggacagtgataacagcacgtctgtgccttctcctactagt
gctatgaagacaagtccattgaacagttctggaagctctcagggcagaagcagtcctgct
ccagctgtaacagcagcatccgtgaccaacatacaggcttctgaagtcactgtgccacca
accatttccagtgaaagctcagggggtacttcaagtgaaagcattcctcaaactgccaca
cagccagccatttctccaccaccaaagcctaccatttctagagttgtttcctcaacacgt
ctggcaaaccaatcaccaagaccatcagggaacacagcaacaaaaatacctagccctgtc
gtaggggtgaagaggacatcttcccctcataaagaagagtctcccaagaaaataaaaaca
gaagaggatgaaataaatgaagatgctagttgtcttgatatgagtgatcatgataaaatg
gaaactaaggaacaacttgatgcagaagcaaatatttcttctcaaacagaaactgttcag
acagtggcatctctgcaagctcctcagaaaacacccagtacagacctttcagatatccct
gctctccctgcaaatcctattcctgttatcaagaattcaataaaactgagattgaatcgg
taa
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