Trachemys scripta elegans (red-eared slider): 117876190
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Entry
117876190 CDS
T07347
Symbol
CCDC88C
Name
(RefSeq) protein Daple isoform X1
KO
K25811
protein Daple
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117876190 (CCDC88C)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
GAS
Motif
Other DBs
NCBI-GeneID:
117876190
NCBI-ProteinID:
XP_034623975
LinkDB
All DBs
Position
4:30746238..30879951
Genome browser
AA seq
2095 aa
AA seq
DB search
MDVTISELMELFLQSPLVTWVKTFGPLGNENEDKLTMYMDLVDGVFLNKIMLQIDPRPTN
QRVNKHVDNDVNLRIQNLTILVRNIKIYYQEVLQQLIVMHLPNVLTIGKDPLSGKSMDEI
KKMLLLVLGCAVQCERKEEFIERIKQLDIETQAAIVSHIQEVTHNQENVFDLQWLELPDV
APEELESLSRNMVFHLKRLIDERDECTELIVDLTQERDYLQSQQPPSPLKTSSPDSSPNL
ANRLSNEDKQHLAVELADTRAKLRRVRQELEEKSEQLVDTKHEAEQLVLEVQKIKQENIH
LAADARSARAYRDELDSLRERANRVERLEMELVRCKEKLHDVDFYKARMEELREDNIILI
ETKAMLEEQLTIARARGDKLHELEKENLQLKSKLHDVELDRDTDKKRIEELLEENMVLEI
AQKQSMNESAHLGWELEQLSKSTDLADTRKSFVFELNECASSRILKLEKDNQSLQTTIQE
LRDLSLTTEESSLKFVELEKENQQLSKKIEKLQNQIEKEKQSNQDLETLSEELIKEKEQL
QGVMETVKADKDRQIEDLKQENDHLNQVVLSLRQRAQVSSEARIKDIEKENKMLHETVTE
TSSKLSKLEFEKKQLHKDFEQVKEKVERVEEMEKELHQLERENEQLTKKAAAMKIVTEKV
EVLEQENGDLEVENRKLRKSLDTLQNVSIRLEDLQRDNKQLDEENLELRRMVETMRFTST
KMAQIEAENKELEREKEELRKNVEMLKTLGKKSERLELSYQSVNSENQRLQQILENSSKK
TQELEKELQGMESENQVLQRKLEELKISSKWQERLEKENKVLEQEVSQLEKDKKMLEKET
KRLWQQVELKDAILDDNTVKLAAVEKENRTLEKEMARFRDSSNKMKEFEKDNKDLIKQVT
IDKRTLATLREDLVLEKLKSQQLSSEMDKLSQELVKIGLNKELLLQDDNGNDNKYKILES
KTDSALKTTLAIKEEKIVLLEAQVEESLNLNQQLQNELNTIKKDFEVLKQSQEVGQCVQN
SLKSPAEKLISNHQMKEKWETGHRETTMELLKVKDRAIELERNNAALHAEKQLLKEQLKH
LEMQNVSFNNQILTLQKQNVFLQEHNTALQTQTAKLQVENSTLSSQSTSLMAQNALLQNQ
QTAKENENENLLKQKDQLKAEFESLLQDHEHFASLHERQSTEYEMLIKQHSCLKTLHKNL
ELEHRALGERYNSLVKHKAELEELEIVLKTEREVLQQERRTNAIATGENQKMREELDRVN
FLHSQLKAEYEGLHAHTKELKTSLNNSQLELNRWQARYDELKEQHQSMDISLTKLDNHCE
LLTRLKGNLEEENHHLLSQIQMLSQQNQMLLEQNMENKEQYHEEQKQYIDKLNTLRRHKE
KLEEKIMDQYKFYDPAPKKKNHWIGARALVKLIKPKKEATKERLISSVESPPWHSESTET
ASSPSASQILKHQQESLDNTSLGSNSMEEKVSHNGASNKALMDLKQNRISQRGGSNDNVE
NSADSATKHCVELGSRTYSTSAIHLTTSSSTPTSRHQSKPKGYNSEDNLCDQSSEVEFSR
NRQHVSKPNSLESSRNASSSSSPLNLKGSSDRIYGRAESLSSEDMVPSRDTPALPRDIYS
YHSTSAILSSNNRQDPSLHGNGSISYDIPQRSNPSQSYAGRQRSASPDSDMVTLEEFLEE
TNKLSPPSRQHSLNETEIISLHQFLLEADALYPSCHFPSHSLHQEPSCSVEPVLSRSCRD
SLRHRTGRGNRRSTSLYIPRDTSSSRDDLLSDYFRKANEPPPIGNQLGQPGRKETAKTPT
SYVSPTIKMTIASEEGRVAKPGHYVKPNLRPAESEVLANATGSLKLPPTPPHQPLSGLRP
MAQPQQTSTMSQRNASLSRAFSLASADLLRATGPETYGQESPQKLGADVRAGKDSGSQTL
RLSVPPGSHATVRDRPQSAKAACTLQAVDSRCRQLDMRRLSLAPPKEERPLSFHQSSASA
NSVQQQERVSAVPGQHYSPTQYTPAKVKSKPAAHSGEVATVTPVRAASSNSEGDVTQGQS
RSDALINKCQSRSPEGHTGAGGIEESNRGGSSRSTPGSPDPHGDQQTVWYEYGCV
NT seq
6288 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaccatttccgagctcatggagctcttcctgcagagccctttggtgacctgg
gtgaaaacatttggaccgttaggaaatgaaaatgaagacaaattgactatgtatatggat
ctggtagatggtgtctttctgaacaaaatcatgttgcaaatagatccacggccgacgaac
caacgtgtcaacaagcacgtcgataatgatgtcaacctccgcatccaaaacctgaccatc
ttagtcagaaacatcaagatttattatcaggaggtcctccagcagctgatcgttatgcat
ttaccaaacgttttaacgattggcaaagatcctctttccggtaaaagtatggatgaaatt
aagaagatgctgttgttggtattgggctgtgctgtacagtgtgaaagaaaggaagagttt
atcgaaagaataaaacaactggatattgagacccaggctgcaattgtttcacacattcag
gaggtgactcataatcaggagaatgtgtttgacttgcagtggctagagctgccagatgtg
gccccagaagaactggagtctctctcgaggaatatggttttccatctcaagaggcttatt
gatgagagagacgagtgcacagaactgattgtggatctcactcaagagagagattatctg
cagtctcagcaaccaccaagtcctctgaaaacatctagtccagattcttcaccaaaccta
gccaatcgtctctccaatgaggacaagcagcacctggctgttgagctggcagacacaaga
gcaaagctgagaagggtccgacaggaattggaagaaaaatctgagcaactcgtggacact
aaacatgaagcagaacagctcgtactagaggtgcagaaaataaaacaggagaacatccac
ctggcagctgatgcacgctctgcccgagcatacagagatgaactggattcactgagagag
agagcaaaccgagtcgagagactcgagatggaactggtccggtgtaaagagaaactgcat
gatgtggatttctacaaggctcgtatggaggaattgagagaagacaacatcatattaatt
gaaacaaaggctatgctagaagaacagttaacaatagcaagagctcgtggtgataaattg
catgaactagagaaggaaaacttgcaattgaaatccaaacttcatgatgtagagctggac
cgggacacagacaagaagcgaattgaagagctgctggaagagaatatggtactggagatc
gcacaaaaacagagcatgaatgagtctgcacacctgggctgggaactagaacagctgtca
aagagcacagacctcgcagatactagaaagtcctttgtgtttgagctaaacgagtgtgca
tcgagtcgcattctgaagctagaaaaggacaatcagagcctgcaaaccaccatccaagag
ctcagagatctctctttgaccacggaagagagcagcctaaagtttgtagagctggaaaag
gagaatcaacaacttagcaagaagattgagaagttgcaaaatcagattgaaaaagagaaa
caaagcaaccaagacttggagaccttaagcgaggagctgataaaagagaaagaacagcta
cagggtgtcatggagactgtaaaagccgacaaagacagacagatagaggacctcaaacaa
gagaatgaccacctcaaccaagtggttttgtccctgagacagagggctcaggttagcagc
gaggccagaataaaagacattgaaaaagagaacaagatgctccatgaaacagttacagag
actagcagcaaactcagcaagctggagtttgagaagaaacaattgcataaagattttgaa
caggttaaagaaaaggtagaacgtgtggaggaaatggagaaagagctccatcagctagag
agagagaatgaacagctcacaaagaaggcagcagccatgaaaattgtaacagaaaaagtt
gaggttctagagcaggaaaatggggatctggaagtggagaacaggaagttgagaaagtcc
ctggataccttacagaatgtttccatccggctagaggacctgcagagggacaacaagcag
ctggatgaagagaacctggagctcaggaggatggtagagaccatgagattcaccagcaca
aaaatggcacagatagaggcagaaaataaggagctagagagggagaaagaggagctaaga
aaaaatgtggagatgttaaaaacactgggaaagaagtcggaaaggctggagctgagctat
cagagtgtgaactctgagaatcagaggcttcagcagatcctggagaacagcagcaaaaaa
acccaagagctagagaaagagctacagggaatggaaagtgaaaatcaggtcctccagaga
aaacttgaagagctgaagatttccagcaaatggcaggagaggttagaaaaggagaacaaa
gtgctggagcaagaagtgtcccaactggagaaagacaaaaagatgctagagaaggaaaca
aaaaggctttggcagcaggtagagttgaaagatgcgattttggatgataacacagtaaag
ctggcagctgtggagaaagaaaacagaacacttgaaaaagaaatggctcgattcagagac
tcgtctaataagatgaaagaatttgaaaaagacaataaagaccttataaagcaagttacc
attgataaaagaacactagctacattgagagaggatttggttcttgaaaagttaaagagc
caacagttgtctagtgaaatggacaaactgagccaagagctcgtgaagattggattgaac
aaagagctgctgctacaggatgataatggcaatgacaacaaatataagattctggaaagc
aaaactgactctgcattaaagacaacactagccattaaagaagaaaagattgtattgtta
gaggctcaagtggaagagtctcttaacttgaatcagcagttgcagaatgagcttaatacg
ataaagaaggactttgaagttcttaagcaaagtcaagaagttgggcaatgtgtgcagaac
tcattaaaatctcctgcagaaaaactcatttccaaccaccagatgaaagagaaatgggaa
acgggacaccgagaaacaacaatggagctgttgaaagtgaaagacagggctatagagctg
gaaaggaataatgcagccctccatgctgagaagcagctgctgaaagaacagctgaagcat
ttggaaatgcagaatgtctctttcaacaatcagatcctgacactacaaaagcaaaatgtc
ttccttcaagagcacaacactgctctgcagacccaaacagccaagctccaggtagaaaat
tcaaccctgagctcccagagcacttcactgatggcccagaatgctttactccaaaaccag
cagacagctaaggaaaatgagaatgaaaatctactgaaacagaaagatcagctaaaagct
gaattcgagtcactactgcaggatcacgaacactttgcctcactgcatgagcgacagtcc
acagaatatgaaatgctaataaagcagcacagctgcctgaaaacattgcacaaaaatctg
gaactggagcacagagctcttggggaaaggtacaacagtttagtaaaacacaaggcagaa
ttggaagaattggaaattgttctaaaaaccgagcgagaggttctgcagcaagaaaggaga
acaaatgcaatagccactggagaaaatcaaaagatgagagaagaactggacagggtaaat
ttcttgcatagccagctaaaggcagagtatgaggggctgcatgcacacactaaggagctg
aaaacctcattgaataattctcagctggagctgaaccgctggcaggctcgctatgatgaa
ctgaaggagcagcaccagtccatggatatctccctgaccaagcttgataaccactgtgag
ctgcttacccgtctaaagggaaatctggaagaagagaaccatcatctcctgagccagatc
cagatgctgagtcagcagaaccaaatgctactggagcaaaacatggagaacaaggaacag
tatcatgaagagcagaagcaatacattgataaattaaatacattaaggagacacaaagaa
aaactggaagagaagataatggatcagtacaagttttatgatcctgctccaaaaaagaaa
aaccactggattggagccagagctttagtcaaattgatcaagccaaagaaagaggctaca
aaggagcgactgatatcatccgtggagagtcctccatggcactctgaatccacagagaca
gcatcctctccatctgcttctcagatactcaagcatcagcaggagagtctggataacacc
tctctggggtcaaactctatggaagagaaagtgagccacaatggagcttcaaacaaagca
ttaatggatctaaaacaaaaccgaatttcccaacgtggaggcagcaatgataatgttgaa
aattcagcagactctgctactaagcactgcgtggagctgggttccagaacttactctacc
tcagccatccatttgaccacttcaagttctactcccacttccaggcaccaaagcaaaccc
aaaggatataattcagaggataatctttgtgaccaatcctctgaggtagagttttcaaga
aacagacaacatgtttccaagccaaatagtttagagagcagtcgaaatgcatccagcagc
agttcacctctcaacttgaaaggttcttcagatcgtatctacggcagagctgagagcctc
agcagtgaagatatggtgccaagtagagacacacctgccttgcccagagacatctacagc
tatcattccacttctgccatcttaagctctaacaacagacaagacccctcccttcacggg
aatggttcgatttcttatgacatacctcagaggagtaacccaagccaatcctatgctggc
aggcagcgatctgcttctcctgacagtgacatggtgactttggaagagtttctggaagag
accaacaagttatccccaccgagtcggcaacacagcttaaatgagaccgaaattatctca
ttgcaccaatttctgttagaggctgatgcactgtatccctcttgccatttcccatctcat
tccctccatcaggaaccttcgtgttcagtcgaaccagtcctcagtcgttcgtgtcgtgac
agtctgaggcacagaactggcagggggaataggagatcaacttcgctgtatatccccagg
gacacttccagtagcagagatgacttgctgagtgattattttagaaaagcaaatgaaccc
cctcctattgggaaccagctgggtcagccaggtagaaaggagacagctaagacgcctacc
agctatgtgtcaccaactataaaaatgaccatcgccagtgaagaggggagagtggctaaa
cctggacactatgtcaaacccaaccttagaccagctgaatctgaggtgctggcaaacgcc
acaggatctcttaaacttcctcccacaccaccacatcagccgctcagtgggctgaggcca
atggcacaaccgcagcagaccagtacaatgagccagaggaatgcctccctgagcagagcc
tttagtctggcctctgcagacctcctgagagccacaggcccagagacatacggacaggag
agccctcagaagctgggtgcagatgttcgtgcaggcaaagactctggcagtcagaccttg
cggctgtctgtgcccccaggctctcacgctaccgtacgagacagaccacagtctgcaaag
gcagcgtgcaccttgcaagctgtcgattcccgttgtcggcagcttgacatgagacgtctt
tctctggcacctccaaaggaggagaggcctctttcatttcatcagtcttctgcctctgcc
aacagtgtgcagcagcaggaacgagtgagtgcagtgcctgggcaacactattcacccaca
caatatacaccggctaaagtcaaatccaagccagccgcacactccggggaagtggccacc
gtgactcctgtcagagctgcctctagtaacagtgagggcgatgttacccaagggcaaagt
cggagtgatgccctcattaacaaatgccagagtaggtcaccagaaggccacactggtgca
gggggaatagaggaatccaacagagggggcagctccaggagcactcctggatctccagat
ccccatggggaccagcagactgtctggtatgaatatggatgtgtgtaa
DBGET
integrated database retrieval system
