Trachemys scripta elegans (red-eared slider): 117876226
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Entry
117876226 CDS
T07347
Symbol
SRCAP
Name
(RefSeq) helicase SRCAP isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117876226 (SRCAP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117876226 (SRCAP)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
117876226 (SRCAP)
SWR1 complex
117876226 (SRCAP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
K-box
HDA2-3
DUF7091
Motif
Other DBs
NCBI-GeneID:
117876226
NCBI-ProteinID:
XP_034624058
LinkDB
All DBs
Position
4:complement(139903493..139932361)
Genome browser
AA seq
3188 aa
AA seq
DB search
MGYTSRRPADSQALHWTDRVSPSLPLPSTLNRSSLARERETLEVESDEEEEFSAHTGDSE
TGSPERRLGCQGTQELDSSSQRLLDQNEAGSQHALEQDDSTSATSKAIGARGEEQGSSKM
QSNPPQQHHALRSEIAPDKMTGSNPVSPASSGSPASSGSVSPSHLTHDSSLDSHLGFDVP
RLQSKALASPGVYASDPASMWDKTHAEIAEQAKHEAEIENRIAEMKKEGFWSLKRLSKVP
EPVRPKVHWDYLCEEMQWLSADFAQERRWKRGVARKVVRMVIRHHEEQKQKEERAKREEQ
AKLRRIASSIAKEVKQFWSNVEKVVQFKQQSRLEEKRKKALDLQLDFIVGQTEKYSDLLT
QSLNETFPMASKTGSSSHISSSHAGSTASSPPPPPHLTDEEDGDFQPHEESDDEETIEVE
EQQEGNDSETHRREIELLKQESELPLEELLQSLPAQILENSCSAAPSIASSNNEEEEAAG
QSEEEPSPSCIQQEKAKSVMQRNKRPWKPDKEDEEFTANEEEAEDEEETIDAEEKLEGDM
DHRKELDDLAQEGELPMEELLQRYAGAYASDFEMDESDSSSDASESSTSEYEEESEDEDS
SSQSDSTAEEESEEEEESQEEEEEEDALAEEATAASREEDFGVEYLLKRDEDRGEGGNDA
APALGPKKEITDIAATAESLQPKGYTLATTQVKTPIPYLLRGTLREYQHIGLDWLVTMYE
KKLNGILADEMGLGKTIQTISLLAHLACEKGSWGPHLIIVPTSVMLNWEMEIKRWCPSFK
ILTYYGAQKERKLKRQGWTKPNAFHICITSYKLVLQDHQAFRRKNWKYLILDEAQNIKNF
KSQRWQSLLNFNSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGM
IEGSQEYNESLVKRLHKVLRPFLLRRVKVDVEKQMPKKYEHVIKCRLSKRQRYLYDDFMA
QATTKETLATGHFMSVINILMQLRKVCNHPNLFDPRPIHSPFITQGICFSTASLVLCALN
RDPFKHVDMGIFDLINLEGRVSRYEADTFLPKWKVTRKLIEEIAESPDPPPRPKPVKMKV
NRMLQPVPKPENRTVVLVNSPRPVTPLQRPMAPVLPEALAPMHPMGPVLPGPVQPPLLPH
PMAVPISLPLPLPPSPVPVPPAARPQGPTLVPTLSQNNAAAAVLQAPVSAPQVLPTLMPA
AQLVPNAPQPPVLPAPATAAAASTLKPGPVPAPAVRLAPNPLNPGAVGSMMKPVTVHSTT
STLPGYNFPATSTVQQRLLLSPDMQARLPSGEVVSIAQLASLANRPLQSAPGSKPLTFQI
QGNKLTLTGTQVRQVTMAQPRQLQRNVVHLVSAGGQHHIISQPAQVALIQAMTQQGAQAQ
GGVQAMSGPQPTTILPAPASATTAAATSSAISVPIAATPVPSSMVNSSGVVKIVVRQAPR
DGLVPAPALQQPPRPTTATTLPSLPAALMAQRAQLPVAPMPPVRLPTQPLVPVRAPTPLQ
ALVRPMIRVVQAPVPSMEQSAPAPAPPSPATAAPLPTPPATTIAAAVCPALAPRPAAAPS
PVPKEEPETLMLRSTTPTPPPPSPRAPRHRRQPPPPPRSPFYLESLEEKRKKQKEERLDR
LFRLNEQHCNLAPIYGTEVLRLCTLFPPGPPREQEEEGQEVAPELDGWRGASYSHCYMAQ
VHRDPQHLEAYWQRASAIAQAILIPQQRVEQLADIIERFIFAMPPVEAPAITIHTSHPPP
SLLLHQAIFKETLRREISPRASGLHRIVCNMRTQFPDLRLIQYDCGKLQTLDLLLRQLKA
GAHRVLIFTQMTRMLDVLEQFLNYHGHIYLRLDGSTRVEQRQALMERFNADKRIFCFILS
TRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLISERTVEENIL
KKANQKRMLGDMAIEGGNFTTAYFKQQTIRELFEMPLDEPAKKEGEVLTMAQEDEEDPMA
NKQTQILEQALCKAEDPEDIRAATQAKAEQVAELAEFNENIPLDADERPSKEEEEEMSKA
EQEIASLMEQLTPIERYAMNFLEASLEDISREELKQAEEQVEAARKDIDQAKDEVVFKLP
DDEDEGRLSEEGYIKKSKKAKVPSRAGQERTGTRMSERLRGTRLSLREADGVDTKLPHAR
LPSLRHLRGHHARLEAEEAEDHLSLVAQHTRGAAIRRDLVWEETPALTRKAGAKREESGT
KVPGAGERVLRPIPHRTEAPIIGERVFRTSPQRPEPPATGDKVLRGTPQRAEPPATIERV
LRAIPQRADTPVPGDRVLRGAPQRAEPLAAMERVLRSAPPRTDAPAPGDRVPRLAPLRPE
AAPAGEQDLRPEAPAGAKLLQPRPEVAPAGEETPQPTLPATEMGMVLGAPALLGHENIAP
TGELASKKPPAEHMLRVEPPPTWEKVLGSMELATGAKMRSMEPSSVSEKVPLPAPCSLEI
PVPHKPVPSPETPASGEESPEKAKGSLGKAEVARELAQRPVELDSVAVKRGEPVRRALEE
PKSLAPDRPAAELPPETPAHCAARTGVEPPTAEPFSTTEGKGPGEVEPQPVWPLSGSLNQ
SLEAANSLPRLKTLPPSKEHNGLERPSPLSNSLAEPQPRELAQGATEPLEIATGCSSSLK
EVSKRGLGDQEDKPKHPDGVSAANTASLGLGEMQPGTTSSSDSPSPAKTPRRRTSADVEI
RQNHQGQDGPAAKVLRKLPGRLVTVVEEKELIRRRRNRIHKLDTTGSTVVSPSSSSAHSI
SELELSPSSKELPLLRDLPARRRIELESRAAKERGDEGSGLELPPSLPPPPLKRKRGRPP
KNKSPEQPSQGEAQPPPGTHVPRVRKPEIKTPEPSSPKTLKQPCKGEARPPPGTLKPRAQ
KLEPKAPEPASPRSKTESSENDSPLEKRRRGRPPKAQWAPATPSTESPPKRKRGRPPKNP
ASPRVETAAPRPGSTSDRDTSAEKEPPPPGRKRRWRRKEEPGQAPSESSSDGEEARPLTR
LARLRQEEKLESGSECSALLPSQSAAPKPEPDGTSSGESSTSEQTPARSTRQRPGSLVPP
LEQEHQRRKRGCLSEGGKSPGAAGSSEDDGGGESESSAELSGEEGERRPKRRRRHAGRTT
GSRRRQCPRGSSADRILRSAAATPAGNTRSATGTTPGGVAGAPTPSATAAPAAMVTSSLS
IRGRKPKT
NT seq
9567 nt
NT seq
+upstream
nt +downstream
nt
atgggttataccagccggcggccagccgactcccaggctctgcactggacagacagggtg
tccccgtccctgcctctccccagcacccttaacaggagcagtcttgcccgggaaagagaa
accctggaagtggagtctgacgaggaggaggagttttcagctcacacaggtgattcagag
acaggcagccccgagcgcaggctgggctgccaggggacccaggagctggacagttcgtcc
cagcggttgcttgaccagaatgaggccggttcccagcatgcactggagcaggacgacagc
acttcggccacgagcaaagctatcggggcgcgaggcgaagagcaagggagcagtaaaatg
cagagcaatcctccccaacagcaccatgcactgcgcagtgagattgcaccagacaaaatg
acggggagcaatcctgtgtcaccggcctcttcggggtcacctgcctccagtggcagcgtc
tcgccatcacacctcactcacgattcctctctggacagtcacctgggctttgatgtgccc
aggctgcaaagcaaagctctggcgtccccaggagtttatgcctcggacccggccagtatg
tgggacaagacgcacgctgagatcgctgagcaggccaagcatgaggcggagattgagaac
cgcatcgcggagatgaagaaggaggggttctggtctttgaagaggctctccaaggtgccg
gagccagttcgccccaaggtacactgggattacctctgtgaggagatgcagtggctttcg
gcagactttgcccaggagcgacgctggaagaggggtgtggccaggaaggttgtgcggatg
gtgatccggcaccatgaggagcagaagcagaaggaggagcgagccaagcgggaggagcag
gccaagctgaggcgcatcgcctcctccatcgccaaagaggtcaagcagttctggagcaac
gtggagaaggtagtgcagtttaagcagcagtctcgcctggaggagaagaggaagaaggcc
ctggacttgcagctggacttcatcgtgggccagacggagaagtactcagatctgctgact
cagagcctcaacgagaccttccccatggccagcaagactggctcctcctcccacatcagc
tcctcccacgccggctccaccgcttccagccccccaccacctccacacctcaccgacgaa
gaagatggtgacttccagccccatgaggagtcagatgacgaggagactattgaggtggag
gagcagcaggaagggaacgactcagagacgcaccggcgtgagatagagctgctgaagcag
gagagtgagctgcccctggaggagctgctgcagtccctgcccgcccagatcctggagaat
tcctgcagcgctgccccctccatcgccagctccaacaacgaggaggaggaggcagcgggg
cagagtgaggaggagccctctccttcatgcatccagcaggagaaagcaaagtccgtcatg
cagaggaacaaaaggccgtggaagcctgacaaggaggatgaggagttcacggccaacgag
gaggaagctgaggatgaagaggagacgatcgatgctgaagagaagctggaaggggacatg
gatcacaggaaggaactggatgacttggcccaggaaggggagctgcccatggaggagctg
ctgcagagatacgccggcgcctacgcctcggactttgagatggatgagtcggatagctcc
tcggatgcctcggagtccagcacctcggagtatgaggaggagtcagaggacgaggacagc
agcagccagtcagactccaccgcagaggaggagagtgaggaggaggaggagagccaggaa
gaggaggaggaggaggatgccctcgctgaggaagcgacggcggcgagccgggaggaagac
tttggcgtggagtacctgttgaaaagggacgaggatcggggagaggggggtaacgacgca
gcccccgccctggggcccaagaaggagatcacagacatcgcagccactgccgagagcctg
cagcccaagggctacaccctggccaccacccaggtgaagacgcccatcccttacctgctg
cgggggaccctgcgggagtatcagcacatcggcctggactggctggtcaccatgtacgaa
aagaagctcaacggtatcctggcggacgagatggggctgggcaagaccatccagaccatc
tccctgctggctcatctggcctgcgagaagggtagctggggtccccacctgatcatcgtg
cccaccagcgtgatgctgaactgggagatggagatcaagcgctggtgccccagtttcaag
atcctcacctactatggggcgcagaaggaacgcaagctcaagcgacagggctggaccaaa
cccaatgccttccacatctgcatcacctcatacaagctggtgctgcaggaccaccaggcg
ttccggcgcaagaactggaagtacctgatcctggatgaggcccagaacatcaagaacttc
aaatcccagcgctggcagtcgctgctcaacttcaacagtcagaggcggctgctgctgaca
ggcacccccctgcagaacagcctgatggagctctggtccctcatgcacttcctgatgccc
cacgtcttccagtcgcaccgcgagttcaaggagtggttctccaatcccctgacaggcatg
atcgagggtagccaggagtacaacgagagcctggtcaagcggctgcacaaggtgctgcgg
cctttcctcctgcggagggtgaaggtggatgtggagaagcaaatgccaaagaaatacgag
cacgtcatcaagtgccggctgtccaagcgccagcgctatctctacgacgacttcatggcc
caggccaccaccaaggagactctggccacagggcatttcatgagcgtcatcaacatcctg
atgcagctgcggaaggtgtgcaaccatcccaacctcttcgacccccggcccatccactcg
cccttcatcacccagggcatctgcttcagcaccgcctccctcgtcctgtgtgccctcaac
cgcgatccctttaagcatgtggacatgggcattttcgacctcatcaacctggaggggcgc
gtgtcccgctacgaggccgacaccttcctgcctaagtggaaggtgacaaggaagctgatc
gaggagatcgccgagtccccggaccccccgcccaggcccaagcctgtcaagatgaaagtg
aacaggatgctgcagccggtgccaaagccagagaaccggaccgtggtgctggtgaacagc
cctcgccccgtgacccccttgcagagacctatggctcctgtgttgccagaggccctggcc
cccatgcaccccatgggcccggttctcccagggcccgttcagcctcccctgctccctcac
cccatggccgtacccatctcgctgcccctgcccctcccgccatccccggtgccggtgcct
cccgctgccaggccgcagggcccaacgctagtgcctacgctgagccagaacaacgccgct
gctgccgtgctccaggccccggtgtctgccccgcaggtcctgcccacactgatgcctgca
gcccagctggtcccgaatgccccccagccccccgtgctgccggcccctgccaccgctgct
gctgcctccaccctcaagcccggcccggtgccagcccccgccgtgcggctagcccccaac
cccctgaacccgggcgccgtggggagcatgatgaagccagtgacagtccattccaccacc
agcaccctgcctggctacaacttcccggccaccagcactgtgcagcagaggctgctgctc
tccccggacatgcaggcccggctgccctcgggcgaggtggtgagcatcgcacaactggcc
tcgctggccaaccggcccctgcagagcgccccaggcagcaagcccctcaccttccagatc
caaggcaacaagctgaccctgacgggcacccaggtgcggcaggtcaccatggcccagccc
cgacagctgcaaaggaatgtagttcacctggtctctgctgggggtcagcaccacatcatc
agccagccggcccaggtggctctcatccaggccatgacccagcagggcgcgcaggcgcag
ggcggggtgcaggccatgtcaggcccccagcccaccaccatcctgcccgccccagcctct
gccaccacggcagccgccacttcatcagctatcagcgtccccatagctgccacgccagtg
ccctcctccatggtgaacagctctggtgtggtgaagatcgtggtgcggcaggccccacgg
gacggcctggtgcctgccccagccctacagcagcctccacgcccaaccacagccaccacc
ctgcctagcctgccggccgccctgatggcacagcgagcccagctccccgtggcacccatg
ccgcccgtgcggttgcccactcagccactggttccagtgcgggcacccaccccactgcag
gccctggtacgacccatgatccgggtggtgcaggcgccagtgcccagcatggagcagtcg
gctccagcaccggctccaccttctcccgccacggccgcccctcttcccaccccccctgcc
accaccatcgctgctgctgtctgccctgcactggctccccggcccgcagccgcgcccagc
ccagtgcccaaggaggaacccgagacactaatgctacgctccaccacgcccaccccgcct
cccccgtcgccacgggctccacggcacagacggcagccccctcccccgccccggtcaccc
ttctatctggaatcacttgaagagaagcggaagaagcagaaggaggagcgcctggaccgg
ctcttccgcctcaacgagcagcactgcaacctggcccccatctatggcaccgaggtgctg
cgcctctgcaccctcttcccccccggcccccctcgggagcaggaggaggaggggcaggaa
gtggcacctgagctggatggctggaggggggccagctacagccactgctacatggcacag
gtgcatcgggacccccagcacctagaggcgtattggcagcgggcctcagccattgcccag
gccatcctgatcccccagcagagggttgagcagttggcagacatcattgagaggttcatc
tttgctatgcctcccgtggaggcacctgccatcaccattcacacctctcacccgcccccg
tcactcctgctccaccaggccatcttcaaggagacgctgcggcgggagatctcgccccgc
gccagcggcctgcatcgcatcgtctgcaacatgcgcacccagttccccgacctgcgcctc
atccagtacgactgcgggaagctgcagaccctggacctgttgctgcgacagctaaaggcc
ggggcgcaccgggtcctcatcttcacccagatgacccgcatgctggacgtgctggagcag
ttcctcaactaccatgggcatatctacctgcgcctggacggcagcacccgcgtggagcag
agacaggcgctgatggagcgtttcaacgctgacaagcgcatcttctgcttcatcctgtcg
acacgcagcggaggcgtgggggtgaacctgacgggcgctgacactgtggtgttctacgac
agcgactggaaccccaccatggacgcccaggcccaggaccgctgccaccgcatcggccag
acccgcgatgtccacatctacaggctgatcagcgagcggacagtggaggagaacatcctg
aagaaggccaatcagaagaggatgctgggagacatggccattgagggcgggaacttcacc
acagcttacttcaaacagcaaaccatccgggagctcttcgaaatgcccttggatgagcca
gccaagaaggaaggggaggtcctcaccatggcgcaggaggatgaggaggatcccatggcc
aacaagcagacccagatcctggagcaggcgctgtgcaaggctgaggaccctgaggacatc
cgggcggccacgcaggccaaggctgagcaggtggcagagctggctgagttcaacgagaac
atccccctggacgcggacgagcggcccagcaaggaggaggaggaggagatgtcgaaagct
gagcaggagatcgcctcgctcatggagcagctcacccccattgaacgctatgccatgaac
ttcctggaggcctctctggaggacatcagccgagaggagctgaagcaggcagaggagcag
gtggaggccgcccggaaggacatagaccaagccaaggatgaggtggtgttcaagctgcct
gacgacgaggatgagggtcggctcagcgaggaaggctacatcaaaaagagcaagaaggcc
aaggtgcccagccgtgcgggccaagagcgcactggcacacgcatgagtgagcgactgcgg
ggcactcgcctctccctgcgcgaggcagatggagtggacaccaagttgccccacgcccgg
ctccccagcctgcgccacctgcggggccaccatgccaggctggaggctgaggaggcagaa
gaccacctgtccctggtggcccagcacacgcgtggcgcagccatccgcagggacctggtg
tgggaggagacgccagctttgacccgcaaggccggagccaagagggaggagtcggggacc
aaggtccccggggctggcgagagggtgctgcggcccatccctcacagaacagaggccccc
atcatcggggagagggtgttccggacctctccacagagacctgaaccccctgccactggg
gacaaagtgctgcgaggcaccccccagagagccgagcccccagccaccatagagcgggtg
ctccgagccatccctcagagagcagacaccccagtccccggggacagggtgctacgaggt
gccccacagcgagcagagcccctggctgccatggagcgagtgctgcggagcgccccccca
agaacagatgctccagctcctggggacagggtgccccggctggccccactcagaccagag
gcagctcctgctggggagcaggacctaagacctgaggcaccagcaggtgcgaagctcctc
cagccaagacctgaggtagcacctgccggagaggagaccccccagccaacactcccagct
accgagatggggatggtcttgggggcgccggccctgctagggcatgagaacatagcaccc
acaggggagctagcctcaaagaaaccacctgctgagcacatgctgagggtggaacctcca
cccacttgggaaaaggtgctgggatccatggagctcgcgacaggagcgaagatgaggagc
atggagccatcttctgtctcagagaaagttcccctaccagccccctgcagcctggagatc
ccagtcccccacaagccagtgccaagcccggagacgccagcctctggggaggagtcacct
gaaaaagccaagggatctttgggcaaagctgaggtagccagagagctggcccaacgccca
gtggagctggacagtgtggccgtgaagaggggagagccagtcaggcgtgccctggaggag
ccgaagagcctggcacccgataggcccgcagcagagctccccccggagacgcctgcccac
tgcgctgctaggacgggggtcgaaccacccactgctgagcctttctccaccacagagggc
aaagggccaggagaggtggagccccagccagtctggcctctctcgggctccctgaaccag
tccttggaggctgccaactccctgcctcgactgaaaacgctgccccccagcaaggagcac
aacgggctagagcggccttcccctctctccaacagcctggccgagccccagccccgagag
ctggcacagggtgccacagagccactggagatagccactgggtgcagcagcagcctgaag
gaggtgtccaagagggggctgggggaccaggaagacaagcccaagcacccagacggagtg
agtgcagccaacaccgcctccctggggctgggggaaatgcagccagggacgacctcctcc
tcggacagcccatcgccggccaaaacaccgcgccggcggaccagcgctgacgtggagatc
cggcagaaccaccagggccaggacggcccggctgccaaggtcttgcgcaagctgccaggc
cgcctggtcaccgtggtggaggaaaaagaactgatccgacgccggcgcaaccgcatccac
aagctggacaccaccggcagcaccgtggtgagccccagcagcagttcggcccacagcatc
tccgagctggagttgtccccctccagcaaggagctgccgctgctccgtgacctacccgcc
cgccgcaggattgagctggagagccgggccgccaaggagaggggagacgagggatctggg
ctggagctgccccccagcctgcccccgccacccctcaagcgtaaacggggccggcccccc
aagaacaagtctccagagcagccaagccagggggaagcacagccaccacccggcacccat
gtaccccgcgtcaggaagccagagatcaagactcctgagccatcctcacctaagaccctg
aagcagccgtgcaagggggaggcacggccaccgcccggcaccctgaagccacgtgcccag
aagctggaacccaaggcccctgagccagcctcgcccaggagcaagacagagagcagtgag
aatgactcccccctggagaagcgccggcggggccggccccccaaggcacaatgggccccc
gccactcccagcactgagtcaccccccaagcgcaagcggggccggccccccaagaaccca
gcttccccccgcgtggagacagcagccccccgccctggctcaacctcggaccgtgacacc
tccgccgagaaggagccgcccccacctggccgcaagaggaggtggagaaggaaggaagag
cctggccaggcccccagcgagagctcgtcggatggcgaggaggcccgccccctcacccgg
ctggcccgtctccggcaggaagagaagctggagtcgggcagcgagtgctcggccctgctc
ccatcccagagcgctgcccctaagccagagccagacggcacctcgtcaggggagagcagc
acctccgagcagacaccggcccgctccacccgccagcgccctggcagcttggtgccaccg
ctggagcaggagcatcaaaggcgcaagcgcggatgcttgtcagagggcggcaagtccccc
ggggctgccggctcatcggaggacgacgggggtggcgagtcagagtcctcagcagagttg
agcggtgaggagggcgagcggcggcccaaacgccgccgccgccacgcaggccgaaccacc
ggcagcaggaggcggcagtgcccccggggcagttcggccgaccgcatcctgcgaagcgcc
gccgccaccccagccggcaacacccgctcggccaccggcaccacgccggggggggtggct
ggagcccccaccccctcggccactgctgctcctgccgccatggttacctcctcactaagt
atcagaggccgcaagcccaaaacgtga
DBGET
integrated database retrieval system
