Trachemys scripta elegans (red-eared slider): 117876254
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Entry
117876254 CDS
T07347
Symbol
TRIM72
Name
(RefSeq) tripartite motif-containing protein 72 isoform X1
KO
K12036
tripartite motif-containing protein 72
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117876254 (TRIM72)
04121 Ubiquitin system [BR:
tst04121
]
117876254 (TRIM72)
Membrane trafficking [BR:
tst04131
]
Exocytosis
Others
Others
117876254 (TRIM72)
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117876254 (TRIM72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
zf-C3HC4_4
zf-RING_UBOX
zf-RING_6
zf-C3HC4_2
zf-RING_5
zf-C3HC4
zf-C3HC4_3
zf-RING_10
Sina_RING
zf-RING_2
Exonuc_VII_L
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
117876254
NCBI-ProteinID:
XP_034624108
LinkDB
All DBs
Position
4:141075938..141085350
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AA seq
585 aa
AA seq
DB search
MRAMSPHANSCLSKSPVTLPSPSCSADKKLDSVLCFPEPQRVIDLYIEAGRGRGAVALSL
SPSQQSAAPRCPSDLCTSSPSSRTLLPNPSPPISVRCCFFLSRLERWLPPHRPAMSNSKQ
RLMQGMHQDLSCPSCLKLFKAPVTAECGHTFCLECLSRAAACPTCQAPTKVEQLHINQQM
EHLVQCFRQVPHDHCEEHMDPLSVYCEQDQQVICGVCASLGKHKGHNIITAAEAHQKMKK
QLPQQQIQLQEAQVRKEKMITLLNRQIAEVEDTVVRFKQQVSEQLGVMRAFLEVLEASLG
REAERVQQQATAVLRDEHKTMGHYLDQLKQMEAVLGEVQEESQTEFLRKYCLVASRLQKI
LGESPPVARMDIQLPIITDDFKFQVWRKMFRALMPALENLTFDPDTAHPNLVVSEDGKRV
ECVEHKQPVSSDDPGRFDKSNCVVSRQSFSSGEHYWEVTVGDKPRWALGVISAEAGRKGR
LQALPSNGFWLVGCKEGKNYEAHVEHKEPRLLRVETKPSRIGLYLSFEDGMLGFYDASDE
DNLVPLFAFHSRLTTTVYPFFDVCWHDKGKNSQPLVIYTPEPEAS
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgagagccatgtctccccatgccaacagctgcctgagcaagtcgcctgtcacccttccc
tccccctcctgctctgcagacaaaaaactggacagtgtcctgtgcttcccagaaccgcag
cgcgttattgatctatatatagaggcagggaggggccgtggagcagtcgcactgagcctg
agcccatcccagcagtcagctgctcctcggtgcccatccgatctctgcacctcatcgccc
tccagccggaccctgctccccaatccgtctcctccgatctcagtaagatgctgcttcttt
ctctcccgcctggagcggtggctcccaccccaccgcccagccatgtcgaactccaagcag
cgcctgatgcagggcatgcaccaggacctgagctgccccagctgcttgaagctgttcaag
gcccccgtgacggctgagtgcggccacaccttctgcctggagtgcctgtcccgggccgca
gcctgccccacctgccaggcccccaccaaggtggagcagctgcacatcaaccagcagatg
gagcacctggtgcaatgcttccggcaggtgccccacgaccactgcgaggagcacatggac
cccctgagcgtctactgcgagcaggaccagcaggtcatctgcggggtgtgcgcctcgctg
ggcaagcacaagggccacaacatcatcacggccgccgaggcccaccagaagatgaagaaa
caacttccccagcagcaaattcaactgcaggaggcacaagtgcgtaaggagaaaatgatc
actctgctgaacagacagatagcagaggtggaggacacggtggtgcgattcaagcagcag
gtgtcggagcagctgggggtgatgcgcgccttcctggaggtgctggaggcctcgctgggc
agggaggcagagcgggtgcagcagcaggccacggccgtgctgcgggatgagcacaagacc
atgggccactacctagaccagctcaagcagatggaggccgtgctgggtgaggtgcaggag
gagagccagaccgagttcctgaggaaatactgcctggtggccagcaggctgcagaagatc
ctgggagagtccccgccagtcgcccggatggacatccagcttccaatcatcacagatgac
ttcaagttccaggtgtggaggaagatgttccgtgcactgatgccagctctggagaacctg
acctttgacccagacacggcccaccccaacctggtggtgtcggaggacggcaagcgggtg
gagtgcgtagagcacaagcagccggtgagctcggacgacccgggccgcttcgacaagtcc
aactgcgtggtgagccgccagagcttctccagcggcgagcactactgggaggtgacggtg
ggcgacaagccgcgctgggcgctgggcgttatctcggccgaggcggggcgaaagggtcgg
ctccaggctctgccctccaacggcttctggctggtgggctgcaaggaaggcaagaactac
gaggcccatgtggagcataaggagccgcggctgctgcgggtggagaccaagcccagccgg
atcgggctgtatctcagcttcgaggatgggatgctggggttctacgatgccagcgacgag
gacaacctggtgccgctctttgccttccactcacgcctcaccaccactgtctaccccttc
ttcgacgtctgctggcacgacaagggcaagaacagccagccgctggtcatctacacgccg
gagccggaggcctcctaa
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integrated database retrieval system
