Trachemys scripta elegans (red-eared slider): 117876341
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Entry
117876341 CDS
T07347
Symbol
SNW1
Name
(RefSeq) SNW domain-containing protein 1
KO
K06063
SNW domain-containing protein 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03040
Spliceosome
tst04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117876341 (SNW1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117876341 (SNW1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tst03041
]
117876341 (SNW1)
Spliceosome [BR:
tst03041
]
Complex B
Other components
Prp19-related factors
117876341 (SNW1)
Complex C
117876341 (SNW1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKIP_SNW
Amidohydro_1
Motif
Other DBs
NCBI-GeneID:
117876341
NCBI-ProteinID:
XP_034624302
LinkDB
All DBs
Position
4:40168657..40190078
Genome browser
AA seq
536 aa
AA seq
DB search
MALTSFLPAPTQLSQDQLELEERARSQRSRQTALVSSRREPPPYGYRKGWIPRMLEDFGD
GGAFPEIHVAQYPLDMGRKKKMSNALAVQVDAEGKIKYDAIARQGQSKDKVIYSKYTDLV
PKEVMNVDDPDLQRPDEEAVKELTEKTRAALEKSVSQKVAAAMPVRAADKLAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVERKMAQKEKEKHEEKLREMAQKARERRAGIKTHAEKEDGEARERDEIRHDRR
KERQHDRNLSRAAPDKRSKLQRNENRDISEVIALGVPNPRTSNEVQYDQRLFNQSKGMDS
GFAGGEDEIYNVYDQPWRSGKDMAQNIYRPSKNVDKDMYGDDLEARIKTNRFVPDKEFSG
SDRRQRGREGPVQFEEDPFGLDKFLEEAKQHGGSKRPSDSSRPKEHEHEGKKRRKE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcaccagttttttaccagccccaactcagctgtctcaggaccagctagagtta
gaagaaagggcaagatctcagaggtcaagacagactgcactggtgtcatcgcgcagggaa
cctcccccatatggttatcggaaaggatggataccacgaatgctagaggattttggagat
ggaggtgctttcccagaaatccatgtggcccaatacccattggatatgggccgaaagaag
aaaatgtccaatgctttggccgttcaagtggatgcagaaggaaaaataaaatacgacgct
atagctcgacagggacagtcaaaggacaaggtaatttacagcaaatatacagatctggta
cctaaagaggttatgaatgtggatgaccctgacctgcaaagacctgatgaggaagcagtg
aaagagctaactgaaaagacgagagcagccctggagaaatctgtctcccagaaagttgcg
gcagccatgccagtccgagcagccgacaaactagctcctgctcagtacatccgatacaca
ccatctcagcagggtgtggccttcaactctggagcaaaacagagggttattcgaatggtg
gagatgcagaaggaccccatggaacctccaagattcaagattaacaagaaaattcctcgt
gggccaccttctcctcctgctcctgtaatgcactcccctagcagaaagatgaccgtgaaa
gagcaacaagagtggaaaattcctccatgcatttcaaactggaaaaatgcaaagggttac
actattccattagacaagcgtctggctgcagatggcagaggactgcagactgttcatatt
aatgaaaactttgccaagctggctgaggctctctacattgctgacagaaaggctcgtgag
gctgtggagatgcgtgcccaggtggagagaaagatggcacagaaagaaaaggaaaagcat
gaggaaaagctcagagaaatggcccagaaagcccgagagaggagagctggaatcaaaacc
catgctgagaaagaggatggagaagctagagaaagggatgaaatcagacatgaccgtcgc
aaagagagacagcatgacaggaatctttctagagcagcccctgacaaaaggtcaaagctg
cagagaaatgagaacagagatatcagtgaagttattgccctgggtgttcccaatcctcgg
acatccaatgaggtccagtatgaccagagacttttcaaccagagcaagggtatggacagc
ggatttgctggaggagaggatgaaatttacaatgtctatgaccagccgtggagaagcggt
aaagacatggcccagaacatctacagacctagtaaaaatgtggacaaagacatgtatgga
gatgacttagaggctcgaataaagactaataggtttgttccagataaggaattttctggc
tcagaccgtagacagaggggcagagagggacccgttcaatttgaggaagatcccttcggt
ctggacaagttcttggaggaagctaaacagcatgggggttctaagaggccctctgacagt
agccgccctaaagaacatgagcatgagggcaagaagaggaggaaggagtga
DBGET
integrated database retrieval system
