Trachemys scripta elegans (red-eared slider): 117876393
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Entry
117876393 CDS
T07347
Symbol
LTBP2
Name
(RefSeq) latent-transforming growth factor beta-binding protein 2 isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tst04990
]
117876393 (LTBP2)
Domain-containing proteins not elsewhere classified [BR:
tst04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
117876393 (LTBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF_3
EGF
hEGF
FXa_inhibition
EGF_2
Fibrillin_U_N
EGF_TEN
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
117876393
NCBI-ProteinID:
XP_034624420
LinkDB
All DBs
Position
4:42644700..42761630
Genome browser
AA seq
1810 aa
AA seq
DB search
MRGSWGSFLPLTLALFLGLGDSQRDFAGRFDPSSSFRTEAGSRDTTRLRLRNQGNNLGPT
GKVYSLFRVHSPPSASEHLPAASPVDRPAWMRSSTGGDNREQPSIPPDHKLPAPQSARGQ
ASNLRAAADSPDGTLLQTPVQRQRTDSARQQQRNGLKARTVPRAKVQNARGRLTGPNVCG
GQCCSGWTTAPGTNRCIKPVCDPPCQNKGSCSRPQLCICRSGFQGAQCEEVVPERVYHPP
GSVAALQPPAGSLPKRAGSAEREGSPRGAQTPILQQPLAGTQGRIGSPVSQHTGSSRTVR
RYPAGNTQLMSNALPNGNGHEQTSSGPHAAYQEHTLSLWGANLTEKIRKIKIVFTPTICK
QTCRSGRCYNSCEKGDTTTLYSQGGQNHDPKSGFRIYFCQIPCMNGGRCIGRDECWCPSN
STGKFCHLPVPKLEKKQVGRVPKTLASGSMKQSMYTLPLSNQLASLNPSLVNVHIKHPPE
ATVQIHQVARVRGDSGQSEENSVEAVLQSQLPTGPQYSYSNGNSNSITTESGQQQRPPEL
MGRCFRETLHGQCANPLAGLAKFEDCCGSVGLFWGLNRCIPCPPRPAHPVIENRQVECPQ
GYKRLNRSHCQDINECLMLGLCKDAECVNTRGSFLCTCKPGTMLDPSRSRCVSDKAVSME
QGLCYRSAAGGVCALPLAQSITKQICCCSRVGKGWGRNCEKCPMLGSEAFKEICPAGHGY
TYSSSDIRLSMRKAEAEELPFSSEEHGESSDRTSNSGAKRPQLQEALSGGVTGHSPDSEG
TADATQEPATHPGDVVEETFSRPPSQPGPEAAGEGTAAAQITEIDRCASVPDPCGPGTCV
NLPGRYSCMCGPGYRLHPGLPRCIDDDECMRDPCAGKGHCINSVGSYSCLCYLGYTLLAS
QDAQTCQDLNECEQPNMCQGGQCTNTPGSYHCECARGYILGRTGQCEDIDECADPSTCPR
GRCVNALGSYECLSCATGYQPMNGRCVDDDECFTVGTCAHGLCINLAGSFRCSCYHGFEV
TEDEKSCQDIDECATHNPCRMGLCINTEGSFSCAACGAGYTVSRDGSMCEDIDECSSPTA
CPLGICTNTDGSFACQACDAGYMLSSNRLTCEDIDECEDPTVSCLGGECLNTPGSYVCHC
HPGFELLNGTVCEDMNECLGSEICSPNGECLNSHGSYFCICAPGFSNAAGGVSCQDVDEC
ADKSRCLRGQCFNTEGSYRCLCENGFMHSQETDDCVDVDECADFGDTVCGTWRCLNTLGS
YRCVMGCQPGFHRTPLGDCIDIDECANETLCGSHAFCDNTDGSFRCLCDNGYENLPPGQD
CVDVNECELMVAVCGTALCENVEGSFLCLCLSDHEEYDTEAGECRPRAGMGDPERPIAPR
PAGSERKECYYHISDVQLCDSVLAKNTTKEECCCTEGAAWGDNCETHPCPILGTVEYSEI
CPSGKGYIPVEGTLLFGQTSYTDADECEMFGPEICRNGHCVNTVPGYKCFCRSGYLYDSS
RLECVDQDECENEMSCVNGECLNTAGSFHCFCSLPLVLDVTRNRCINVSNRAEDLDEHEI
HLDICWQRVSNYICNQPLRGRRTTYTECCCRYGEAWSQDCALCPHRASEEFAHLCNVARG
ETEREAGLQERPGYEYGPGLEDSHYGLYSPDLGPYYNYLSPEYGAPDASFPQRELSSEVG
GSTFLRTQLHPAQSQPRYLPSQTGHFDSFEGLQAEECGILNGCENGRCVRVQEGYTCDCF
DGFQLDMTHMACVDINECEEVSSPEPLCEGGTCENTEGSYRCNCSPGFVVQAEPHRCAPA
PAQSPEAAQL
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atgaggggctcctggggcagttttctccctctcactttagctcttttcctggggcttggg
gattctcagagagactttgctggaagatttgatccgagttcttcattccgaaccgaagct
gggagcagggacacaactcggctaaggctgcggaaccagggcaataacttgggacccacg
ggcaaggtgtacagcctgttccgagtgcacagccctccttctgcctcggagcacctccca
gcagcctctcctgtggatcgcccagcctggatgaggagctcgacaggaggggacaacagg
gagcagccgtctattcctccagatcacaaactacctgctccccagagtgcccgaggccaa
gccagcaacctgagggcagctgcagactctccagatgggaccctccttcagacccctgtg
cagaggcagaggacggactccgcacgccagcagcaaagaaacgggctcaaagctcggaca
gtgcccagggcaaaggtgcagaatgccagaggccgactcacagggccaaacgtctgcggg
ggacaatgctgctcagggtggacaactgctcctggcacaaaccgatgcatcaaacccgtc
tgtgaccctccatgccagaacaagggatcctgcagccgaccccagctctgcatctgccgc
tcgggtttccagggcgcccaatgtgaagaggtcgttccagaacgagtgtaccatcctcct
ggctctgtggcagccctccagcccccagcaggctcccttccgaagagggctggcagtgca
gagagagaaggctcacccagaggggcccagacacctatcctgcagcaaccactagctggg
actcaaggaagaatcggctcccccgtctcccagcacactgggtcttcacgcactgtccgg
cgctacccagctggtaatactcagctaatgtccaatgctctacccaatgggaatgggcat
gaacagaccagctctggaccacacgcagcctatcaagagcatacgctgtctctctggggg
gccaacctgacagagaaaatccgaaagataaagattgtcttcacccccacaatctgcaaa
cagacatgccggagcggccgctgctacaacagctgtgagaaaggggacaccaccaccctg
tacagccaggggggccagaaccatgaccccaagtctggcttccgcatctatttctgccag
atcccctgcatgaacggaggacgctgcataggcagggatgagtgctggtgcccgtctaac
tccacagggaagttttgccacctcccagttccaaagctggaaaaaaaacaagtgggaaga
gtcccaaagaccctggccagcggctccatgaagcagtccatgtacacgctgcctctgtcc
aaccagctcgcttccttaaatccttccctggtgaacgtccacatcaagcaccctccagag
gccactgtgcagatccaccaggtggccagggtgaggggagactcgggccaatcggaggag
aacagtgtggaggctgtactccagtctcagctacccactgggccacagtacagctacagc
aatgggaacagcaacagcatcaccacagagagtggccagcagcagcggcccccagagctt
atggggagatgtttccgggagacactgcatggacagtgtgctaacccactggcgggcctg
gccaagttcgaggattgctgtggcagtgtggggctcttctgggggttgaaccggtgcatc
ccatgtcccccgagaccagctcatccagtgattgaaaacagacaggtggagtgtccccag
ggatacaagaggctgaatcggagccactgtcaagatatcaacgagtgcctgatgcttggc
ctgtgtaaagatgccgaatgtgtgaacacccgcggcagtttcctctgcacctgcaaaccc
gggaccatgctggacccgtcccgcagtcgctgtgtctcggataaggccgtgtccatggag
caggggctgtgctatcgctcagcagcaggaggcgtctgtgccctaccactcgcccagagc
atcaccaaacagatctgctgctgcagccgtgttggcaaaggatgggggaggaattgtgag
aagtgtcctatgcttgggtcagaagcctttaaggagatttgcccagcgggacatggttac
acctactccagctccgatatccgtctgtccatgagaaaggcggaggcagaagagctgcca
ttcagctcagaggagcatggggagagcagcgaccggacgtccaacagtggagcaaaaagg
ccgcagctgcaggaagccctgagtggtggagtcacaggtcattctccagatagtgagggc
actgctgatgccacccaagaacctgccacacacccaggggatgtagtggaggagacattc
tctcgccctccctcccagccaggcccagaggctgcaggggagggcactgctgcagcacag
atcacagaaatcgatagatgcgcctctgtacctgacccgtgtggcccaggcacttgtgtg
aacctgcccggcagatacagctgcatgtgtggccctggctatcggctgcatcctggcctc
ccccgatgcattgatgatgatgagtgtatgagagatccctgcgctgggaagggtcactgc
atcaacagcgtgggctcctactcctgcctctgctacctggggtacaccctgcttgcctcc
caggatgcacagacctgtcaggatctgaatgagtgtgagcagcccaacatgtgccagggg
gggcagtgcaccaacacacctggatcatatcactgtgagtgtgccaggggctacatcttg
ggccgcacaggacagtgcgaagacattgacgagtgtgctgaccccagcacctgccccaga
gggagatgtgtcaatgcgctgggctcctatgagtgtctcagctgtgcaaccggttaccag
ccgatgaatggaagatgcgttgatgatgatgagtgcttcaccgtgggaacctgtgctcat
ggactgtgcatcaacctggctggctccttcaggtgttcctgctaccatggctttgaggtg
acagaagatgagaagagctgccaagatatcgatgagtgtgcgacccacaacccctgccgc
atgggactctgtatcaacaccgagggctccttctcctgtgcagcctgtggtgctggatac
accgtgtccagagatggcagcatgtgtgaagatatcgatgagtgcagctcaccaactgcc
tgccccttgggaatctgtaccaacacggacggctcctttgcctgccaagcctgcgatgct
ggctacatgctctcctccaacagactcacctgtgaagatattgatgagtgtgaagacccc
accgttagctgcctcggaggagagtgcctgaacacaccgggctcctacgtctgccactgc
caccctggatttgagctgctcaacggcactgtgtgtgaagacatgaatgagtgcctgggc
agtgagatctgcagccccaatggcgagtgtctgaacagccacggatcctacttctgtatt
tgtgctcctggcttctcaaatgcggctgggggagtcagctgtcaagacgtggatgaatgt
gcagacaaatcccggtgtttgcgaggccagtgtttcaatacggagggctcctacagatgt
ttgtgtgaaaatggcttcatgcactcacaggagactgatgactgtgtagatgtggacgag
tgtgcggatttcggggacactgtgtgcggcacatggaggtgcctgaacaccctgggttca
taccgctgcgttatgggctgccagcctggcttccaccggacaccgctgggtgactgcatt
gacatagatgaatgtgccaacgagacgctgtgcgggagccatgccttctgtgacaacacg
gatggctcattccgctgcctctgcgacaatggctatgagaacttgcccccaggccaggac
tgcgtggacgtgaatgaatgtgagctgatggtagccgtgtgtgggaccgcgctctgtgag
aacgtggagggatcattcctgtgcctgtgcctcagtgaccatgaggagtacgacacggag
gcaggagagtgccggccacgagctggcatgggggatcctgagcggcccatagcaccacgt
cccgctggctcagagcggaaggagtgttactatcacatcagcgacgtccagctgtgtgac
agcgtcctggccaaaaacaccaccaaggaggagtgctgctgcaccgagggggctgcttgg
ggggacaactgtgagacccatccctgccctatcctgggcacagtggaatacagtgagatc
tgcccgagtgggaagggctatatccctgtggaagggactctgctctttggacagacgtca
tacacagatgcagacgagtgtgagatgttcggccccgagatttgtcggaatgggcattgt
gtgaacacggtgccagggtacaagtgcttctgccgctctggctatctctacgactccagc
cggctcgagtgtgtggatcaagacgagtgtgagaatgaaatgtcctgcgtgaatggtgag
tgtctgaacacagccggctccttccactgcttctgcagcctccccctggtgctggatgtg
acccgcaaccgctgcatcaacgtctccaacagggctgaagacctggatgaacatgaaatc
cacctggacatctgttggcagagagtctccaactacatctgcaaccagccactgcggggg
cgacggaccacgtacaccgagtgctgctgccgctatggcgaggcctggagccaggactgt
gcactctgcccccatagggcctctgaggaatttgctcacctgtgtaacgtggccagggga
gagactgagagagaggctggactccaagaaaggcccggatacgagtatggaccaggccta
gaagactctcattatggactctatagcccagacttagggccctattacaattacctgagt
cctgagtatggagcccctgatgccagcttcccccagagagaactgagcagtgaggttggt
ggcagcacattcctacgcactcagctccatccagcgcagtcccagccccgctacctgccc
agccaaactgggcattttgacagctttgagggactccaggcagaggagtgcggcattctg
aatggctgcgaaaacgggcgctgcgtgcgcgtgcaggagggctacacctgcgactgcttt
gacggcttccagctggacatgacccacatggcctgtgtagacattaacgagtgtgaggag
gtgagcagccctgagcccctgtgtgagggcggcacctgtgaaaatacagagggctcttac
cgctgcaactgctcacctggctttgtggtgcaggctgagccccaccgctgtgctcctgca
cccgcccagagcccggaggcagcacagctttag
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integrated database retrieval system
