Trachemys scripta elegans (red-eared slider): 117876456
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Entry
117876456 CDS
T07347
Symbol
IRF2BPL
Name
(RefSeq) probable E3 ubiquitin-protein ligase IRF2BPL
KO
K22383
interferon regulatory factor 2-binding protein
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117876456 (IRF2BPL)
04121 Ubiquitin system [BR:
tst04121
]
117876456 (IRF2BPL)
Transcription factors [BR:
tst03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
117876456 (IRF2BPL)
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
Atypical E3
117876456 (IRF2BPL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
DUF7623
Motif
Other DBs
NCBI-GeneID:
117876456
NCBI-ProteinID:
XP_034624550
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All DBs
Position
4:40895970..40899562
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AA seq
730 aa
AA seq
DB search
MSAAQVSSSRRQSCYLCDLPRMPWAMIWDFTEPVCRGCVNYEGADRIEFVIETARQLKRA
HGCFQDGRSPGPPPPVGVKAVPLSAKEAAAAAQQQLNHVDASSKAASAGLPQSSLDRYGL
SAAEQRSRFEYPPPPGSLGSSHAARLPNGLGGPNGFPKPPEDGPPELNRQSPNSSSSSSS
SRRGAHGGLVPGLPPGAGGAQMNVPPNLLPQTLLNGPTASGVALPPPHGGLSGRGGGPPA
SSASSQGGTCGGGGGSGSSSEACGKRPGSVSSSDQERELKEKQRNAEALAELSESLRNRA
EEWASKPKIVRDTLLTLAGCTPYEVRFKKDHALLGRVFAFDAVSKPGMDYELKLFIEYPS
GSGTVFSSASGVAKQMYQDCMKDFGRGLSSGFKYLEYEKKHGSGDWRLLGDLLPESVRFF
KELVGADMLPQPYLDASCPMLPTALVSLPRGGAGVGGAQGAGAASRGPGGGGGGGGMRKR
KASPEPSDSAEGALKLSDEQQRQQWMASQSEALKLTMSAGGFGAVHGGGPPPPPPPPLGP
HSNRTTPPESAPQNGQSPMAALMSVADTLGNAHSPKDGSSVHSTTSTRRNSSSPVSPASV
PGQRRLASRNGDMNLQVAPPPPNAHPGMDQVHPQNIPDSPMANSGPLCCTICHERLEDTH
FVQCPSVPSHKFCFPCSRESIKAQGATGEVYCPSGEKCPLVGSNVPWAFMQGEIATILAG
DVKVKKERDP
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctgcgcaggtgtcctcgtctcggagacagtcatgctacctgtgcgacctaccc
cgcatgccctgggccatgatctgggacttcactgagcccgtgtgccggggctgcgtgaac
tacgagggtgccgaccgcatagaatttgtgatcgagacggctcggcagctgaagagggcg
catggctgcttccaggacggccgttccccaggccccccgcctcctgtcggggtcaaggct
gtgccgctctcagccaaagaagcggccgcggcggcccaacagcagctcaaccatgtggac
gcctcctccaaagcagcttctgccgggcttccccagtccagcctggaccgctacggactc
agtgcagctgagcagcgcagccgctttgaatatccgccgcccccgggaagcctgggcagc
agccacgctgcccgcctgcccaacgggctgggcggccccaatggtttccctaagccgccg
gaggacggccccccggagttgaaccgccagagccccaactcatcatcctcttcctcctcc
tcccgccgcggggcacacgggggcctcgtgcccggcctccccccgggggctggcggggcc
caaatgaacgtgccgcccaacctgcttccacagactttactcaatggccccacagcttct
ggcgtggcgctacctcccccgcacggggggctgagcggccgcggcgggggacccccagct
tcctccgcatcttcccaagggggcacatgtggcggtgggggtggcagcggctcgtcctcc
gaggcctgcgggaagcgaccaggttcggtgtccagcagcgatcaggagcgggagctaaag
gagaagcagcgcaacgcggaggcgctggccgagttgagcgagagtctgcggaaccgggcc
gaggagtgggccagcaagcccaagatcgtgcgggacacgctgcttaccctggccggctgc
accccctacgaggtccgcttcaagaaggaccatgcacttctcggccgcgtcttcgccttc
gatgcagtctctaagcccggcatggactatgagctgaagctcttcattgagtacccgagc
ggctcaggcactgtcttctccagcgcctcgggggtggccaagcagatgtaccaggactgc
atgaaggactttggccgcggcctctcctccggcttcaagtacctggagtacgagaagaaa
cacggctccggcgactggcggctcctgggcgacctgctgcctgagtctgtgcgtttcttc
aaggagctggtgggcgcggacatgctgccccagccttacctggacgctagctgccccatg
ctccccactgccctggtgagcctgccccggggaggagccggagtcggcggggcgcagggg
gccggggccgcttccaggggccccgggggaggcggtggcggcgggggaatgcgcaaaagg
aaggcgtccccggagccctctgactcggccgagggggccctgaagctgagtgacgagcag
cagcggcagcagtggatggccagccagagcgaagcacttaaactcaccatgtcggctggg
ggcttcggggcggtgcacggaggggggcccccacccccacccccgccgcctctggggcct
cactccaaccggaccaccccgcccgagtcggcccctcaaaacggacagtcccctatggcc
gcgctcatgtcggtggccgacacactgggcaatgcccactcgcccaaggatggcagctcg
gttcactccaccacttccacccgcaggaatagtagcagcccggtgtccccggcctcggtg
ccgggccagcgtcgcttggcttcccgcaacggggacatgaacctgcaggtggccccgcct
ccccccaatgcccaccctggtatggaccaagtgcacccccaaaacattccagattccccc
atggccaatagcgggcccctgtgctgcaccatttgccacgaacgcttggaggacactcac
tttgttcagtgcccatctgtacccagccacaagttctgcttcccttgttccagagagagc
atcaaggcccaaggggcaactggcgaggtctattgcccaagtggagagaaatgcccccta
gtaggttccaatgtgccttgggcatttatgcagggcgagatcgctaccattttagctggc
gacgttaaagtgaaaaaggagagagacccttaa
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integrated database retrieval system
