Trachemys scripta elegans (red-eared slider): 117876478
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Entry
117876478 CDS
T07347
Symbol
SCFD1
Name
(RefSeq) sec1 family domain-containing protein 1
KO
K19998
sec1 family domain-containing protein 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117876478 (SCFD1)
Membrane trafficking [BR:
tst04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
117876478 (SCFD1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
117876478 (SCFD1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec1
cwf21
Motif
Other DBs
NCBI-GeneID:
117876478
NCBI-ProteinID:
XP_034624620
LinkDB
All DBs
Position
4:complement(49503958..49648451)
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AA seq
632 aa
AA seq
DB search
MAAGIREKQTVALKRMLNFNLPPIKNSTGEPVWKVLIYDRFGQDIISPLLSVKELRDMGI
TLHLLLHSDRDLIPDVPAVYFVMPTEENIDRMCQDLRNQLYESYYLNFISAISRSKLEDI
ANAALGASAVTQVAKVFDQYLNFITLEDDMFVLCNQNKELISYRAINRPDITDTEMEAIM
DTVVDSLFCFFVTLGAIPIIRCSRGTAAEMVAVKLDKKLRENLRDARNSLFTGDTLGAGQ
FSFQRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESSGMENSPAGARPK
KKNKKSYDLTPADKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSIMGIEGEDEG
AISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIMS
KSALDKSLLDMISDPDAGTPEDKMRLFLIYYINSVQAPSEADLEQYKKALTDAGCNLAPL
NYIKQWKAFAKMASAPTSYGNATAKPLGLFSRVMNTGSQFVMEGVKNLVLKQQNLPVTRI
LDNLMEMKSNPETDDYRYFDPKMLRGSDSSVPRNKNPFQEAIVFVVGGGNYIEYQNLVDY
IKGKQGKHVLYGCSELFNAAQFIKQLSQLGQK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggtatccgggagaagcagacggtggccttgaagcgtatgttgaattttaat
cttccccctattaaaaacagcacaggagaacctgtatggaaggttctcatttatgacaga
tttggccaagatatcatctctcctttgctgtcagtgaaagagctgagagacatgggcatc
accttgcatctgcttttgcattctgatcgagatcttattccagatgttccagcagtatac
tttgtaatgccaacagaagaaaatattgatagaatgtgccaggatcttcgaaatcagctt
tatgaatcgtattatttaaattttatttctgccatttcaagaagtaaactggaagatatt
gcaaacgctgccttaggggctagtgcagtaacacaagtagcgaaggtctttgatcagtat
ctcaatttcattactttggaagatgatatgtttgtattgtgtaatcaaaataaggagctc
atctcatatcgtgccattaacagaccagatataacggacactgaaatggaggccattatg
gacactgtggttgacagtctcttctgcttttttgttacacttggagctattcctataatc
agatgctcaagaggaactgcagcagaaatggtggcagtgaaactagataagaaactccga
gagaacctaagagatgccagaaacagtcttttcacaggtgacacgcttggggctggacaa
ttcagcttccaaaggcctttattagtccttgttgacagaaacatagacttagcaactcct
ctacaccatacttggacataccaggcattagtgcatgatgtactggatttccatttgaac
agagttaatctagaggaatcttcaggaatggaaaattctccagcgggggctagaccaaag
aaaaagaataaaaaatcatatgacttaactccagctgataaattttggcaaaagcataaa
ggcagtcctttcccagaggtagcagagtctgttcagcaagagctggaatcctacagagcc
caagaagatgaggtcaaaaggcttaaaagtattatgggaattgaaggggaggatgaagga
gcaataagtatgctttctgataatacagctaagctaacttcagctgttagctctcttcca
gaactacttgaaaagaaaaggctcatcgatcttcatacaaatgttgcaactgctgttctg
gagcatataaaggcacggaaactagatgtgtattttgagtatgaggaaaaaataatgagc
aagtccgctctcgataaatctctcttggacatgatttctgaccctgatgcgggaactcca
gaagacaagatgcgattgtttcttatctattacataaactcagtgcaggcaccatcagag
gctgatttggagcaatacaaaaaagcattgacagatgcaggatgtaatcttgctcccttg
aactacataaaacaatggaaggcttttgccaagatggcttcagctcctaccagctatgga
aacgctacagctaaaccattgggtctgttttcacgtgttatgaatacaggctcacagttt
gtgatggaaggagtgaagaatttggtattgaaacaacaaaatctaccagtcacacgtatc
ctagacaaccttatggagatgaagtcaaatcctgagacagatgactacaggtattttgac
cccaagatgttgcgaggcagtgacagctcagttccaagaaacaaaaatccattccaggag
gcaattgtttttgtagttggaggaggcaactacattgaatatcaaaatcttgttgactac
ataaagggcaaacaaggcaaacatgtcttatatggctgcagtgaactttttaatgctgca
cagtttataaaacagctgtcccaacttgggcagaaatag
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