Trachemys scripta elegans (red-eared slider): 117876485
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Entry
117876485 CDS
T07347
Symbol
PSMA6
Name
(RefSeq) proteasome subunit alpha type-6 isoform X1
KO
K02730
20S proteasome subunit alpha 1 [EC:
3.4.25.1
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
117876485 (PSMA6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tst01002
]
117876485 (PSMA6)
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tst03051
]
117876485 (PSMA6)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
117876485 (PSMA6)
Peptidases and inhibitors [BR:
tst01002
]
Threonine peptidases
Family T1: proteasome family
117876485 (PSMA6)
Proteasome [BR:
tst03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
117876485 (PSMA6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
AMIN-like
Motif
Other DBs
NCBI-GeneID:
117876485
NCBI-ProteinID:
XP_034624634
LinkDB
All DBs
Position
4:complement(46163127..46178618)
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AA seq
246 aa
AA seq
DB search
MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL
LDSSTVTHLFRITETIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIAD
ISQVYTQNAEMRPLGCCMILIGIDEEHGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLE
KKVKKKYDWTFEQTVETGITCLSTVLSIDFKPSELEVGVVTVENPKFRILTEAEIDTHLV
ALAERD
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgaggctccagcgccggcttcgaccgccacatcactatcttctcccccgagggc
cgcctctaccaagtagaatatgcttttaaggctataaaccagggtggccttacatcagtt
gctgttcgtgggaaagattgtgcagtaattgtaacacagaagaaagtacctgacaagtta
ttggattccagcacagtgactcatttattcagaattactgaaactattggatgtgtaatg
acaggaatgacagctgacagcaggtctcaggttcagagagcccgctatgaggctgctaac
tggaaatacaagtacggctatgagatcccagtggatatgctgtgtaaaaggattgcagat
atttctcaggtctacacacaaaatgctgaaatgaggcctcttggttgctgcatgatactg
attggtattgatgaagaacatggccctcaggtatacaagtgtgatcctgcaggttactat
tgtgggttcaaggccacagctgcgggggtcaaacaaacagagtcaaccagctttcttgaa
aagaaagtgaagaagaaatatgactggacatttgaacagacagtagagacaggaataact
tgcctgtctactgttctgtccattgatttcaaaccttcagaactagaagttggagtagtt
acagttgaaaaccctaaattcaggatccttacagaagcggagattgatacgcaccttgta
gctctagcagagagagattaa
DBGET
integrated database retrieval system
