Trachemys scripta elegans (red-eared slider): 117876738
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Entry
117876738 CDS
T07347
Symbol
SIX6
Name
(RefSeq) homeobox protein SIX6
KO
K19473
homeobox protein SIX3/6
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117876738 (SIX6)
Transcription factors [BR:
tst03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
117876738 (SIX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
FAM199X
SMN_YG-box
HTH_3
Motif
Other DBs
NCBI-GeneID:
117876738
NCBI-ProteinID:
XP_034624958
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All DBs
Position
4:13895003..13899105
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AA seq
246 aa
AA seq
DB search
MFQLPILNFSPQQVAGVCETLEESGDIERLGRFLWSLPVAPAACEALNKNESVLRARAIV
AFHTGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFP
LPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRR
QRDRAAAAKNRLQQQVLSQGSVRSLQAEEESAGEPLGAASSPAASLSSKAATSAISITSS
DSECDI
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgttccagctgcccatcctcaatttcagcccccagcaagtggccggggtctgcgagacc
ctggaggagagcggggacattgagcgcctgggccgcttcctctggtccctgccggtggcc
cctgcggcatgcgaggccctgaacaagaacgagtcggtgctgagagcccgggccattgtg
gccttccacacggggaactaccgggagctctaccacatcctggagaaccacaagttcacc
aaggagtcgcacgccaagctgcaggccctctggctggaggcgcattaccaggaagccgag
aagctgcggggccgacccctggggcccgtggacaagtaccgggtgcggaagaagttcccg
ttgccccgcaccatctgggacggggagcagaagacgcattgcttcaaggagaggacgagg
cacttgctacgggagtggtacctgcaggacccttaccccaaccccagcaaaaagcgagaa
ctggcccaggctaccggacttacccctacacaagtgggcaactggttcaaaaaccgcaga
caaagagacagggcagcagccgctaagaacaggctacagcagcaggtcttatcccaaggc
tcggtgcgctcgctgcaggccgaggaggagagcgcaggggagccgctgggggccgcctcc
agtcccgcggccagcctgtccagcaaagcggccacctctgccatttccatcacatccagc
gacagtgaatgtgacatctga
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integrated database retrieval system
