Trachemys scripta elegans (red-eared slider): 117876761
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Entry
117876761 CDS
T07347
Symbol
RTF1
Name
(RefSeq) RNA polymerase-associated protein RTF1 homolog isoform X1
KO
K15178
RNA polymerase-associated protein RTF1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tst03021
]
117876761 (RTF1)
Transcription machinery [BR:
tst03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
117876761 (RTF1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
117876761
NCBI-ProteinID:
XP_034625003
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Position
4:60811191..60856046
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AA seq
690 aa
AA seq
DB search
MVKKRKGRVLIDSDTEDSGSEENLDQELLSLAKRKRSDSEEKEPPVSKPTASSDSETSDS
DDEWTVGGSKNKKKGKAGKVEKKGAMKKQMNKAASSGSSDKESSAESSAPEEGEVSDSES
NSSSSSSDSDSSSEDEEFHDGYGEDLMGDEEDRARLEQMTEKEREQELFNRIEKREVLKR
RFEIKKKLKTAKKKEKKEKKKKQEEEQEKKKLSQIQECQVMSHNKERRSKRDEKLDKKSQ
AMEELKAEREKRKNRTGSKCKEKLSAKIKAQLFPFSAELLAKKQPLKTSEVYSDDEEEEE
DDKSSEKSDRTSRSSSSDEEEEKEEIPPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAK
TVTGCFVRIGIGNHNSKPVYRVAEITGVVETAKVYQLGGTRTNKGLQLRHGSDQRVFRLE
FVSNQEFTESEFMKWKEAMFSAGMQLPTLDEINKKEVSIKEALNYKFNDQDIEEIVKEKE
RFRKAPPNYAMKKTQLLKEKAMAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI
SYINQRNREWNIVESEKALVAESHNMKNQQMDPFTRRQCKPTIVSNSRDPAVQAAILAQL
NAKYGSGALPDAPKDMGKGQGKDKDVNSKSASDLSEDLFKVHDFDVKIDLQVPSSESKTL
AITSKAPPAKDGAPRRSLNLEDYKKRRGLI
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagaagcggaaaggccgggtcctcatcgactccgacaccgaggacagcggcagc
gaggagaacctggaccaggagctcctgtcattggccaaacggaaacgcagtgattccgag
gagaaagagccacctgttagcaaaccaacagcttcttcagactctgagacctcagacagt
gatgatgagtggactgttggaggttctaaaaacaaaaagaagggaaaagctggcaaagta
gagaagaagggagctatgaagaaacagatgaacaaagctgcctcctcaggcagctcagac
aaagagagctcagctgagagttcagcacctgaagagggtgaagtgtctgattcagagagc
aacagctcctcctccagctcagattcagattcatcatctgaagatgaggagttccacgat
ggttatggggaagacctgatgggagatgaggaggacagagctcggctggaacagatgaca
gagaaggagagggaacaggagctatttaatcggatagagaagagggaagtgctgaagaga
agatttgaaattaagaagaaactaaaaacagcaaaaaagaaagaaaaaaaggagaaaaag
aaaaagcaagaggaagagcaggagaagaaaaagctctcacagatccaggaatgccaggtg
atgtcacacaacaaagaacgacggtcaaagcgggatgagaaactggataagaaatctcag
gccatggaggaactgaaagcagagagagagaaaaggaagaacagaacaggttccaaatgc
aaggagaagctttcagcaaaaataaaggctcaattatttcctttttcagctgagttgctt
gcaaaaaaacagccattaaaaactagtgaagtatactcagatgatgaagaggaagaagag
gatgataagtctagtgagaagagtgatcgcacatccagatcatcctcatctgatgaggag
gaagaaaaagaagaaattcctcccaaatcccagccagtctccttacccgaagaactgaat
cgggtacggttatctcggcataagctggagcgttggtgtcatatgcccttctttgccaag
acggtcaccggctgctttgtgcgtatcggcattgggaaccacaacagtaaacctgtctat
cgggttgctgaaatcactggtgttgtagaaactgcgaaggtttaccagcttgggggtacc
aggacaaataaaggactacagttacggcatggcagtgaccagcgtgtgtttcgtctggag
tttgtctcaaatcaggaatttactgaaagtgagttcatgaagtggaaggaagcgatgttc
tctgctgggatgcaattgcctacactagatgagataaacaagaaggaagtgtccatcaaa
gaagccctcaactacaaatttaatgaccaagacattgaggagattgtgaaagagaaagag
aggttccgaaaagcccctcccaactatgccatgaagaaaactcagctattaaaggagaag
gctatggcagaggacttgggggaccaggacaaggcaaaacagattcaagatcagcttaat
gaactggaagaaagagcagaggccctggaccgccagcggacaaaaaacatttctgcaatc
agttacatcaaccagaggaatagagaatggaacattgtggagtccgagaaggctctagtg
gctgaaagtcacaatatgaaaaaccagcaaatggacccttttactaggcggcagtgcaag
cccacaatagtttccaattccagggatcctgctgtccaagctgccatcctcgcccaacta
aatgcaaaatatggatctggtgctttaccggacgctccaaaggacatgggcaagggtcag
gggaaggacaaagacgtgaattcgaaatcagctagtgacctctcagaggacctgttcaaa
gtgcatgactttgatgtaaagattgatctccaggttcccagctcagagtctaagacgctt
gccatcacctccaaagctccaccagcaaaagatggtgcccctcggcgatcattgaacctg
gaagactacaagaaaaggcgggggcttatttga
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