Trachemys scripta elegans (red-eared slider): 117876784
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Entry
117876784 CDS
T07347
Symbol
CAPN3
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117876784 (CAPN3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tst01002
]
117876784 (CAPN3)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
117876784 (CAPN3)
Peptidases and inhibitors [BR:
tst01002
]
Cysteine peptidases
Family C2: calpain family
117876784 (CAPN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_5
EF-hand_8
CAPN13-like_C_EFh
EH
RPOL_N
Motif
Other DBs
NCBI-GeneID:
117876784
NCBI-ProteinID:
XP_034625057
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All DBs
Position
4:62672722..62743952
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AA seq
814 aa
AA seq
DB search
MPSAINAVVAQQTETGSVPSTNISTTAETGGGSGGIYSAIISRNQPIIGVREKTFEELYK
KCLEKKILYVDPDFPPNESSLFYSQKLPIKFEWKRPTEICENPRFIIGGANRTDICQGEL
GDCWFLAAIACLTLNEKLLCRVIPHDQTFIKNYAGIFHFQFWRYGNWVEVVIDDCLPTYN
NQLVFTKSSQRNEFWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYEIKDAPK
DIYKIMKHAKDRGSLMASSIDDNMGFSYGTAPQSDLGELIARMVKNVNSMPRTDSTLDFQ
GSEERPAWTIIPMQFETRMTCGLVKGHAYSVTAVEETSFKAGKIKLVRLRNPWGQVEWKG
AWSDNSDEWNLIDKAEKIRLQYRIAEDGEFWMSFDDFMRYFTKLEICNLTPDTLESDKLQ
TWTVSVNEGRWVRGCSGGGCRNYPDTFWTNPQYRLELLEEDDDPEDNEVVCSFLVALMQK
NRRKERKLGANLLTIGFAIYEVPKEMHGNKQHLQKDFFLYNASKARSKSYINMREISERF
RLPPNEYVIVPSTYEPHQEGEFILRVFSEKRSLSEEVENKIEAERPSKKKKGKPIIFVSD
RANSNKELKVDEASDKEKKKTSRDEKKKSDEPTRTNADKDSEEEKQFRNIFQQIAGDDME
ISADELRSVLNNVLKKHKDLKTEGFALESCRSMIALMDTDGSGKINFEEFRHLWDKLKSW
QKIFKRYDTDHSGTINSYEMRNAVKDAGFCLNKQLYDIITMRYADKNMNIDFDSFICCFV
RLEGMFRAFHAFDKDGDGIIKLNVLEWLQLTMYA
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcggccataaatgctgtggtggctcaacagacagagactgggtcagttcctagc
accaacattagcacaacagctgaaacaggaggaggttcagggggtatctactctgctatc
atcagtcgcaaccagcccattattggagtgcgggaaaagacctttgaagaactctacaag
aaatgcctggaaaagaagattctttatgtggatcctgatttcccacctaatgagagctcc
ctcttctacagccagaaactacccatcaagtttgagtggaaaagacccacagaaatctgt
gagaatccacgctttataattggtggagccaaccgaactgatatttgtcaaggagaatta
ggtgactgctggttcctagctgccattgcttgcctgacgctgaatgaaaagctactctgc
cgagtcatacctcacgatcagaccttcataaaaaactatgctgggatctttcacttccag
ttctggcgctatggaaactgggtggaggttgtcattgatgactgtttaccaacatataac
aaccagctggtcttcaccaaatcctcccagcgcaatgaattctggagtgctctgctggaa
aaggcctatgcaaaactccacgggtcctatgaggctttgaaaggtggcaataccacagag
gccatggaggatttcacaggaggagtgacagagttctatgagataaaagatgcacccaaa
gatatatacaagatcatgaaacatgccaaggacagaggatcactcatggccagctccatt
gatgacaatatgggcttctcgtacgggactgctcctcaaagtgatcttggggaattaatt
gcccgaatggtgaagaatgtgaatagcatgccgaggactgactcaactctagatttccaa
ggctcagaggaaaggccagcctggactataatcccaatgcagtttgagacacgcatgact
tgtgggctagtcaaaggacatgcctattcagttactgcagtggaagagacatcatttaaa
gcgggaaaaataaagctagtgcggctaaggaacccctggggacaggtggaatggaaagga
gcctggagtgacaattcagatgaatggaacttaattgacaaagcagagaaaatccgacta
cagtacagaattgcagaggatggggagttctggatgtcatttgacgatttcatgaggtac
ttcacaaagctggagatctgtaacctcacacctgatactctggagtctgataagctccaa
acttggactgtttcagtcaatgaagggcgttgggtgagaggttgctccggaggaggttgt
cgcaattatccagatacattttggaccaatccgcagtatcgcttggagctcctggaggag
gacgatgatcctgaagataatgaggttgtctgcagcttcctggttgcactgatgcagaaa
aacaggagaaaagagcgcaaactcggagccaacctcctcactattggctttgccatttat
gaggtgccgaaagagatgcatggtaacaagcagcacttacaaaaggattttttcctttac
aatgcctccaaagctagaagtaagtcatatataaacatgcgagaaatctctgaacgcttc
cggctgcctcccaatgagtatgtcatcgtcccatcgacatatgaacctcaccaggaggga
gagttcatcctgagggtcttctcagaaaaaagaagtctttcagaggaagttgaaaacaag
atagaagcagaacgtccttccaaaaagaaaaaaggcaagccaatcatctttgtttctgac
agagcaaacagcaataaggagttgaaagttgatgaagcatctgacaaggagaagaaaaaa
acgagcagagatgagaaaaagaaaagcgatgagcccactcgaacaaatgctgacaaggat
agtgaagaagagaagcagttcaggaatatattccagcagattgctggagatgacatggag
atcagtgctgacgaactcagaagtgttctgaataatgttctaaaaaaacacaaagacctg
aagacagaagggtttgcgctggagtcctgccgcagcatgattgccttaatggacacagat
ggttcagggaaaataaacttcgaggagtttcgacacctctgggataagctgaaaagctgg
cagaaaattttcaaacgttatgacacagatcattctggcaccattaatagttacgagatg
cgtaatgcagtcaaagatgcaggattctgccttaacaagcagctctatgacatcattaca
atgcgctatgctgacaaaaacatgaacattgacttcgacagctttatctgctgctttgtg
cgactggaaggaatgttcagggcattccacgcctttgataaagatggagatggtatcatt
aaactcaacgtcttggagtggctgcagctcaccatgtatgcttaa
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