Trachemys scripta elegans (red-eared slider): 117876861
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Entry
117876861 CDS
T07347
Symbol
WDHD1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
KO
K11274
chromosome transmission fidelity protein 4
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117876861 (WDHD1)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
117876861 (WDHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Mcl1_mid
Beta-prop_THOC3
Beta-prop_WDR5
Ctf4_C
HMG_WDHD1
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR3_2nd
Beta-prop_IFT140_1st
WD40_Gbeta
HMG_box
WD40_MABP1-WDR62_1st
Tricorn_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_Nup120_160
Beta-prop_Vps41
eIF2A
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_WDR75_2nd
Beta-prop_SCAP
HMG_box_2
NOL11_N
Motif
Other DBs
NCBI-GeneID:
117876861
NCBI-ProteinID:
XP_034625216
LinkDB
All DBs
Position
4:complement(10065331..10110273)
Genome browser
AA seq
1118 aa
AA seq
DB search
MPSTQKPMRYGHTEGHTDVCFDDIGSYIVTCGSDGDVRIWENLDDDDPKSINVGEKAYSF
ALKNGRLVTAVSNNTVQIHTFPEGAPDGILTRFTTNANHVVFNRDGTKIAAGSSDFMVKV
VEVTDSSQQKTFRGHDAPVLSLSFDPQDAFLTSASCDGSVRVWKISDQTCVTSWPLLQKC
NDVINAKSICRLAWQPKSGKLLAVPVEKVVKLYRRETWDNQFDLSDNFITQTLSIVTWSP
CGQYVAAGSVDGCIAVWNVDTQECVERMKHEKGYTICGLAWHPKGGQIAYTDTEGNLGLL
ENVCNRDGKKSSGKVSCAVTKDYNDLFDEDDDFLNTDLIEPRSSPKVVSNEEDDDDDDLM
LASGHPRHRGAIIEDDENSLDTALMKVNSNLEKDDDNDQDGSIPVLPVSTTQRPFYDGPM
PTPQQKPFQSGSTPSHLTHRFMVWNSIGIIRCYNDEQDNAIDVEFHDTSIHHATHLPNSL
NHTMADLSSEAILLACESTEELASKLHCVHFSSWDSNKEWTVDMPKDEDIEAICLGQGWA
ACATSAMLTRVFTIGGVQKEIFSLPGPVVSMAGHGEQLVVIYHRGTGFDGDQCLGVQLIE
LGKKKRQVLHGNPLPLTRKSYLMWVGFSAEGTPCYVDSEGIVKMLNRGLGNTWIPVCDTR
EYCKGKSDHYWVVGIHENPQQLRCIPCKGARFPPTLPRPAVAILSFKLPYCQITTEKGQM
EEQFWRSVVFHNHLDYLSKNGYEYDENAKNEAAKEQQELLMKLFALSCKLEREFRCVELA
DLMTQNAVNLAIKYASRSRKLILAQRLSEMAVEKATEMAAPEEEEEEEDFRNHLNAGYSN
STTEWSQPRVRNLLHEQDMEDSKEADAVEEVEEMQKFRQNPFCKTVGLPEMSTPKSAVIT
SSSQGRVNPFKVSANQKDPTAHSANILDNMSKFSKNTPTPNSRAVNKQKSPVIKPLMPKP
KSKQALAATFFQPRPPHAGDKAVEEKEEKAENILPEIQAAPTENKRPKTGFQMWLEENRE
SILADNPDLEEADIIKEGMSRFRVLSSDERMVWTEKAKGGAASNSAEAKKRKRPADAKNE
GKEKLEEKSKEDTSLPKKQKPLDPSTNVRLSAFAFKQS
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgccttcaacacaaaagccaatgcgctatggacacacagaaggccacacagatgtctgc
tttgatgacattggaagctatattgtaacttgtggcagtgatggagatgttaggatttgg
gaaaacctggatgatgatgatcctaagtccattaatgtgggagaaaaagcatattcattt
gctttaaagaatggaagactggttactgcagtatctaacaatactgtccagattcataca
ttccccgaaggagctcctgatggcatccttactcgtttcaccacgaatgcaaaccatgtt
gtctttaacagggatggtactaaaattgctgctggatccagtgattttatggtcaaagtt
gtggaggtgacagatagcagccaacagaaaacattcagaggacatgatgcccctgtccta
agtctgtcttttgatccccaagatgcttttctgacatcagcaagctgtgatgggtctgtc
agagtatggaaaatctcagatcagacatgcgtgacaagctggccactgctgcagaagtgt
aacgatgtgataaatgctaaatcaatatgtaggcttgcctggcagcctaaaagtgggaag
ttactagcagttccagttgagaaagttgttaaactgtacagaagagaaacttgggataat
caatttgatctttcagataatttcattactcagactctgagtattgtgacctggtctccc
tgcggacagtatgtggcagctggaagtgtcgatggttgtatagcagtttggaatgtggac
acccaggagtgcgtggagaggatgaaacatgagaaaggttacaccatttgtgggctggca
tggcaccccaaaggtgggcaaatagcatatacagacactgaaggaaatctggggctgctt
gagaatgtttgtaatagagatggaaagaaatcaagtggcaaggtctcctgtgcagtaaca
aaggactacaatgatctttttgacgaagatgatgactttttaaacacagacctgattgag
ccacggtcatctccaaaggtcgtatctaatgaggaagatgatgatgatgacgacctcatg
ctagcttcaggccatcctagacaccgaggggcaataatagaggatgatgagaactcacta
gatactgcactgatgaaagttaattccaatcttgaaaaagatgatgacaatgaccaagat
ggtagcattccagttctgccagtatcaaccacccaaagacctttctatgacggaccaatg
ccaaccccccaacaaaagccattccagtctggttccaccccttcgcacctcacgcaccgc
ttcatggtgtggaactctattggtattattcgttgttataatgatgagcaagacaacgct
atagatgtggagtttcacgatacctctatacatcatgcaacacacttgccaaattctctg
aatcacacaatggctgatctctccagtgaagctatcctgttggcatgtgagagcacagag
gaacttgcaagcaagcttcattgcgttcattttagctcttgggattccaacaaggaatgg
acagtagatatgccaaaggatgaagatattgaagctatttgtctgggtcagggctgggct
gcttgtgccactagtgccatgctaactcgtgtgtttacaattggtggagttcagaaagag
atcttcagtctccctggtccagtggtgtcaatggcgggacatggagagcagcttgtggtt
atttatcacagaggtactggctttgatggggaccagtgccttggagtacagctgatagag
ttaggaaaaaagaagagacaggttttacatggaaacccacttcctcttacaaggaaatcc
tacctgatgtgggtaggattttcagcagaaggtaccccatgttatgtggattctgaggga
attgtgaaaatgttgaacagaggacttgggaacacctggattccagtatgtgacacaaga
gaatactgcaaaggaaaatctgatcattattgggtagttggcatccatgaaaacccccag
cagctgaggtgcattccttgtaaaggagctcggttccctcctacacttccacgtcctgct
gtagcaattttatcctttaaacttccttactgtcaaattacaacagaaaaaggacagatg
gaggaacaattttggcgttcagtagtgtttcacaaccacttggattatttatccaaaaat
ggatatgaatatgatgaaaatgctaaaaatgaggcagcaaaagaacagcaggagctttta
atgaaattgtttgctctttcttgtaaactagaacgtgaatttcgttgtgtggagcttgct
gacttgatgacccaaaatgctgtcaatttagctatcaagtatgcatctcgctctagaaaa
ctaatattagcccagcgtcttagtgagatggctgtagagaaagcgacagagatggcagca
cctgaagaagaggaggaggaggaggatttccgaaatcatctgaatgctggttatagcaac
tctacaacagagtggagccagcctcgagtcagaaaccttctgcatgaacaagatatggaa
gacagcaaggaagctgatgcagttgaggaagtggaagaaatgcaaaaatttagacaaaat
ccattctgcaaaactgtaggattgccagaaatgtctactcctaaatctgctgtaattaca
tctagcagtcaaggacgagtcaatcccttcaaggtatcggctaatcaaaaagacccaaca
gctcactcagctaatattctagataatatgagcaagttctccaagaatacgccaacacct
aacagccgggctgtaaacaaacaaaagtctccagttataaagcctctgatgcccaagccc
aagtccaagcaggctttagcagccacttttttccagccccgtccaccccatgctggtgac
aaagcagtagaagaaaaagaagaaaaagctgaaaatatattgcctgaaatccaagctgct
cccactgaaaacaaaagaccaaagacaggattccaaatgtggctagaagaaaacagagag
agtattttggcagataatcctgatttggaggaagcagacataataaaagaaggcatgagt
cgatttagagtgctgtcatctgatgaaaggatggtctggacagagaaagccaaaggagga
gcagctagtaattcagctgaagcaaaaaagcggaagcgcccagcagatgcaaagaacgag
gggaaagagaaactagaagaaaaatcaaaggaggacaccagtttgcccaaaaaacagaag
ccgttagatccatctacaaatgtcagattgtcagcctttgcattcaagcagagctaa
DBGET
integrated database retrieval system
