Trachemys scripta elegans (red-eared slider): 117876867
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Entry
117876867 CDS
T07347
Symbol
DCAF5
Name
(RefSeq) DDB1- and CUL4-associated factor 5 isoform X1
KO
K11800
DDB1- and CUL4-associated factor 5
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117876867 (DCAF5)
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
117876867 (DCAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_IFT122_1st
MIOS_WD40
Beta-prop_Aladin
WD40_RFWD3
Beta-prop_WDR41
WD_LRWD1
Beta-prop_SPT8
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
117876867
NCBI-ProteinID:
XP_034625228
LinkDB
All DBs
Position
4:67528250..67623761
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AA seq
963 aa
AA seq
DB search
MKRRPGPGGSMRSVVGFLSQRGLQGDPLLTQDFQRRRLRGCRNLYKKDLLGHFGCVNAIE
FSNNGGQWLVSGGDDRRVLLWHMEQAIHSRVKPVQLKGEHHSNIFCLAFNSGNTKVFSGG
NDEQVILHDVESSETLDVFAHEDAVYGLSVSPVNDNVFASSSDDGRVLIWDIRESPHGEP
FCLANYPSAFHSVMFNPVEPRLLATANSKEGVGLWDIRKPQSSLLRYGGNLSLQSAMSVR
FNSNGTQLLALRRRLPPVLYDIHSRLPVFQFDNQGYFNSCTMKSCCFAGDRDQYILSGSD
DFNLYMWRIPPDPEAGGIGRVVNGAFMVLKGHRSIVNQVRFNPHTYMICSSGVEKIIKIW
SPYKQPDCTGDLDGRIEDDSRCLYTHEEYISLVLNSGSGLSHDYANQSVQEDPRMMAFFD
SLVRREIEGWSSDSDSDLSESTILQLHAGVSERSGYSESESSASLHQSPPQMAEESDETA
YNLGTLRSTESPPAREDVASRQQRLSALRRYQDKRLLALSNESDSDENTCEAELDTDLFP
RPRSPSPEENESSSSSSSSSTDDEEELNERRASTRQRNALRRRQKMQREERTSTNPENVS
TYIGEDLYDYPQIKVDDLSSSPASSPGRSSTNMEVLKERASPCSDNESVERKIYKAYKWL
QYSYISYSTGKDGESSHEEGENDEGRPGTSGRHSTAPSLNKEDASNLSLLVPQGAQDIST
ESHSKETLKEYGTVENSSNGQDHERDNQRRTEDQESTSQDTSSGSVEHSFETKKLNGKAI
CKGLSSRTEEPCTQTAGLLEQKNSQNCQPASSHHSLAISKDSLSAAAICSGSGNYSRNQT
DDSEDRNLETSCVNHNNGHLHPCPSYFNNGQRFGEQETITQGLQSHLNADNGNIVQTGVT
LHKDCCLSEMDSNSYSVGTKEDISNLHLTDSESSQALGGLKRHRAEFEDTDSENSSSEKK
LKT
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggagacctgggccggggggcagcatgaggtcggtggtgggcttcttgtcccag
cggggcttgcagggggacccgctgctcacccaggactttcagaggagacgcctgcggggc
tgcagaaacctctacaagaaggacctactgggccacttcggctgtgtcaatgccattgaa
ttctccaacaatggaggccagtggctggtctcaggaggggatgaccgccgggtcctgctt
tggcatatggaacaagccatccactccagagtcaaaccagtgcagctgaaaggggagcat
cattctaacatcttctgcctagctttcaacagtggtaacacaaaagtgttctctggaggc
aatgatgagcaagttatactccatgatgttgaaagcagtgagaccttggatgtgtttgca
catgaagatgcagtgtatggcctttcagtgagcccagtgaatgataacgtctttgccagt
tcatccgacgatggccgggttctcatttgggatatccgagagtctccccatggagagccc
ttctgcttggcaaactacccatcagcctttcatagtgtgatgtttaatccagtagaaccc
agattactggctactgccaactctaaagagggtgtgggactttgggatattcgcaaacca
cagagttcactgctccgctatggtggaaatctgtcccttcaaagtgccatgagtgtccga
ttcaacagcaatggaacccagctgctggcactgcgtcggcgtcttccaccagtcctctac
gatatccactcccgactgcctgtcttccagtttgacaaccaaggttacttcaactcgtgt
accatgaagagctgctgttttgcaggcgaccgtgaccagtacatcctctctggctctgac
gacttcaacttatacatgtggaggattcctccggatccagaagcaggtgggatcggcagg
gttgttaatggtgcctttatggtgttgaaaggtcatcggtctattgtaaaccaggttcgg
tttaatccccatacctacatgatttgctcctctggcgttgaaaagattataaagatctgg
agtccttataagcagcctgactgcacaggagatctggatggtagaattgaggatgattca
cgttgcctctacactcatgaagagtacattagtcttgtgctgaacagtggcagtggtctg
tcccatgattatgccaaccagtctgtccaggaagatccacgaatgatggcattctttgac
tccctcgtgcgccgggagattgaaggctggagttctgactccgacagtgaccttagtgaa
agcaccatcttgcagctccatgctggagtaagtgaacgctccgggtatagtgaatcagag
tcctctgcctctcttcatcagtccccaccgcaaatggcagaagaatcagacgaaacagcc
tataacttggggaccttaagatcaacagaatctccgccagcaagagaagatgtggcttct
cgtcaacagaggctatctgcacttagaagatatcaggataaacgtctcctggctctttcc
aatgagtctgattctgatgagaatacctgtgaagcagaactggacacagaccttttccca
cggccaaggtccccaagtcctgaggagaatgaatctagcagttctagcagtagtagcagc
acagatgatgaagaggaattgaatgaacgacgtgcatcaacacgtcaacgcaatgcattg
agacgacgacagaaaatgcaaagggaagagaggactagtacaaatccagaaaatgtgagc
acctacataggtgaggatctctatgattacccacagatcaaagtagatgacctttcttct
tctccagcttcttcacctggaagaagttctactaatatggaggtcctcaaagaaagggcc
tctccttgctcagataatgaatcagtagagagaaagatttacaaggcttacaaatggctt
cagtattcttatatatcctattcaactggtaaagatggtgaatcctctcatgaagagggg
gagaatgatgaggggagaccaggaactagtggaagacacagtacagcaccctccttaaat
aaggaagatgctagtaacttgagtttattagttcctcaaggtgcccaagatatttctact
gaaagccacagcaaagaaactttaaaggaatatggtacggtagaaaactctagtaatggt
caagatcatgaacgcgacaatcagcgacggacagaggatcaagaaagcacatcccaagac
accagcagtgggtctgtagaacattcttttgagactaaaaagctcaatggaaaagccatc
tgcaaagggctaagtagtcgtaccgaagagccatgcactcaaactgcaggacttctagaa
cagaaaaacagccagaactgtcaaccagcatcaagccaccactcactggctatttccaag
gattcactctctgctgccgccatctgtagcggatctggtaattactccagaaaccaaact
gatgacagtgaggaccggaaccttgagacatcctgtgtaaatcacaataatggccactta
catccttgcccttcatatttcaacaatggacagaggtttggagagcaggagactataacc
caaggactacaatcacacttaaatgctgataatggcaacattgtacagacaggtgtgacc
ttgcacaaagactgttgcctgtctgaaatggactccaacagttacagtgtgggtacgaaa
gaggatatcagcaacttgcatctgacagacagtgagagctctcaagctcttggaggactg
aaaaggcacagagcagagtttgaagacacagattcagagaattcttcatcagaaaagaag
ttaaaaacatga
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integrated database retrieval system
