Trachemys scripta elegans (red-eared slider): 117876887
Help
Entry
117876887 CDS
T07347
Symbol
SIX4
Name
(RefSeq) homeobox protein SIX4
KO
K15615
homeobox protein SIX4
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117876887 (SIX4)
Transcription factors [BR:
tst03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
117876887 (SIX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_TSHZ3
Motif
Other DBs
NCBI-GeneID:
117876887
NCBI-ProteinID:
XP_034625267
LinkDB
All DBs
Position
4:complement(14028118..14040963)
Genome browser
AA seq
773 aa
AA seq
DB search
MSSASPTDKLPSAVEIKQENVTEIHSEAGTVPQERAARNPAPPPAAPFPMEQAGSAAGEE
GAADQLLLHTELLARNHHAAASSSSSSPSSSQTPLAFSPDHVACVCEALQQGGNLDRLAR
FLWSLPQSDLLRGNESLMKARALVAFHQGIYPELYSILEGHSFDSSNHPLLQELWYKARY
TEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEETVYCFKERSRNALKELYKQNRYPSPA
EKRNLAKITGLSLTQVSNWFKNRRQRDRNPSETQSKSESDGNPSTEDESSKGQEDLSPHP
LPNSSDGATNLSLPNHMEPVYMQQLGNTKISLSSSGVLLNGNLVPASTSSVFLNGSSFLQ
GPNGVILNGLNIGTSQTVTLNPPKTTSSAVSNGGSITDILVSSSEDVKDFKILQASVSNS
AAAPTPYSPSNVPVSFPGLIPSSEVKRESIQTVASQDGGSVVTFTAPVQINQYGIVQIPN
SGTNGQLLNGSIGFSPLQLPPVSVAASQGNISINPSTSDGGTFTSDSSTAQQGKVFFSSL
APSAVVYTVPNSGQAIGSVKQEGLERSLVFSQLMPVSQNTQLNVNISSENVAGGGLQSMA
SSLVNVTPSHNFSLASPSLLNATELNSGISESQSMSASVTNTSTVISISNTNYATLQNCS
LITSQDLMSISTAQPALREIVSTTGDHVSHPSAQVHPDFVREHRLVLQSAPDVKENFLSN
SESKSTSNLMMLDTKSKYVMSNMVDTVCEELETDKKELAKLQTVQMDEDMQDF
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgcctcccccacagacaagctcccgagcgcggtggagatcaagcaagagaat
gtgacggaaatccactccgaagcaggcaccgtgccccaggaaagggcagcccgcaaccct
gcaccgccgcccgctgcccctttccccatggagcaagcaggctccgcggctggggaggag
ggagctgcggatcagctcctgctccacactgaacttctggccaggaatcaccatgctgcc
gcctcctcctcctcctcctctccctcctcctcccagacccccctggctttctccccggat
catgtagcctgtgtctgcgaggcgctgcagcaaggtgggaacctggaccgcctggccagg
ttcctgtggtctttgccccagagcgatctgctacgtggcaacgagagcctgatgaaagcc
cgggcgctggtggctttccaccagggcatctacccggagctctacagcatcctggagggc
cacagcttcgactcctccaaccacccgctgctgcaggagctgtggtacaaggctcgctac
accgaggcggagcgagcccggggcagacccctgggggcggtggacaagtaccggctgcgg
aggaagttccccctgcccaggaccatctgggacggcgaggagacggtgtattgcttcaag
gagaggtcccgcaacgcgctgaaggagctctacaagcagaaccggtacccgtcgccggcc
gagaagcggaacctggccaagatcaccgggctctccctcacccaggtcagcaactggttc
aagaaccggcggcagcgggaccgcaacccctccgagacccagtccaaaagtgagtcagat
ggcaaccctagcacagaagatgaatccagtaaggggcaggaggatttatctccacatcca
ctccccaactcgtccgatggagctaccaatctaagccttcccaatcatatggagccagtg
tacatgcagcagcttggaaacactaaaatatctttaagttcttctggcgttttgctgaat
ggaaacttagtgcctgccagtacttcttctgtctttcttaatgggagctcttttcttcaa
ggacccaatggcgtaatcctcaatggtctcaacatagggacttcacagacagtaacttta
aatccacccaaaacaacttcaagtgctgtgagcaatggagggtcaatcactgacatattg
gtgtcttcttctgaagatgtcaaggacttcaaaatcctccaggcttctgtgtctaactct
gcagcagcaccaacaccatacagtcccagtaatgtacctgtctcatttccagggttaata
ccaagcagtgaggtgaaaagggaaagcatacaaactgttgcttctcaagatggagggtct
gtagttacttttactgctcctgtccaaataaaccagtatggcattgtccagatccctaat
tcaggaacaaatggccagttgcttaatggaagcatcgggttttctcctctgcagctgcct
cctgtttctgtggcagcttcacaaggtaacatttcaataaatccaagtacatcagatggg
gggacttttacaagtgattcttcaacagcgcagcaaggaaaggttttctttagctctctt
gctcccagtgcagtggtgtacacagttcccaattcaggtcaggcaataggatctgtaaaa
caagaaggattggaaagaagccttgtgttttctcagttaatgcctgtcagtcagaataca
caactaaatgtaaacatatcttctgaaaatgtagctggtggaggcctccagtccatggct
tcctccttagtaaatgtaactccctcacataatttttccctagcttcaccttctctttta
aatgctacagaactgaactctggtatctcagagagtcagtctatgtcagcatctgtaaca
aatacatctactgtgatatcaatcagcaacactaactatgcaactcttcagaactgttcc
ctcattaccagtcaagatctcatgtcaatttctacagcacagcctgcactccgggaaata
gtttcaacaactggagaccatgtcagtcatccatctgcacaagttcatccggattttgtc
agagagcacaggttagttctgcagtcagcacccgatgtcaaggagaatttcttatccaat
tctgagagtaagtcaaccagcaacttaatgatgctggacacaaaatccaaatatgttatg
agtaatatggtcgacacggtctgtgaagaactggaaacggacaaaaaagagcttgccaaa
ctccagacagttcagatggatgaagatatgcaagatttttaa
DBGET
integrated database retrieval system
