Trachemys scripta elegans (red-eared slider): 117876935
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Entry
117876935 CDS
T07347
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04136
Autophagy - other
tst04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117876935 (ATG13)
04136 Autophagy - other
117876935 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117876935 (ATG13)
03029 Mitochondrial biogenesis [BR:
tst03029
]
117876935 (ATG13)
Membrane trafficking [BR:
tst04131
]
Autophagy
Autophagosome formation proteins
ULK complex
117876935 (ATG13)
Atg1 complex
117876935 (ATG13)
Mitochondrial biogenesis [BR:
tst03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
117876935 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
117876935
NCBI-ProteinID:
XP_034625422
LinkDB
All DBs
Position
4:complement(71976176..72022803)
Genome browser
AA seq
552 aa
AA seq
DB search
MDTDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPL
GTITLSCAYRINLAFISTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTTGEDNGA
AYPSVEDSQEVCTTSFSTSPPSQCVFTVTKAHFQTPPPVVMDTLKVPMMGLAFSHQLSSS
RLSYQPAALGVGSADMGYPVIFAGGLNAAHPHQLIVPGKEGGVPPVPSQPAHGTQADHER
MVMCTPLDGALYSAATPSSSEDTETVSNSSEGKSGSPHDLLETIFVRKVGAFVNKPINQV
TMASLDIPFAMFAPKNVELEDNDPMVNPPDSPDIESPLQGSLHSEGSSGSSTGNTHDDFV
MVDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKN
VKEFDAFVETLQ
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgatctcaactcccaggacaggaaggacctggacaagttcatcaaatttttt
gctctgaagactgtacaagtgattgtccaggcccgacttggagagaaaatctgtactcga
tcatcatcctccccaacaggctctgactggttcaacttggcaatcaaagatataccagag
gtaactcatgaagcaaagaaagccctggcaggacagctacctgctgttggacggtcaatg
tgtgtggagatctctctcaaaacctctgagggagattccatggagctggaaatctggtgt
ctagaaatgaatgaaaagtgtgacaaagaaatcaaagtttcctacactgtgtacaatagg
ctgtctctgctgctgaagtccttgcttgctataaccagggtgactccagcctacagactt
tcaaggaaacagggccatgaatatgtaatactgtacaggatatactttggggaagtgcag
ctgagcggcttgggggaaggtttccagactgtccgtgttggaactgtgggtaccccattg
ggcaccatcactctgtcttgtgcctacagaatcaatctggccttcatttcaaccaggcag
tttgagaggaccccacctatcatggggattatcattgatcactttgtggaccgtccctac
cccagctcctcgcccatgcacccctgcaattacagaacgactggtgaggacaatggggca
gcatacccatcagtggaagactcccaggaagtgtgcactacctctttctccacctcccct
ccatcccagtgtgtttttactgtcactaaggcacattttcagacccctcctcctgtggtg
atggacaccttgaaggtccctatgatgggactggccttttcacatcaactttccagctct
cgtctttcctatcagcctgctgccctgggagttggatcagctgacatggggtatccagta
atctttgctggtggtttgaatgctgcacatcctcatcagttgattgttccagggaaggag
ggtggggtgcccccagttcctagccagccagcacatggcactcaggctgaccatgagagg
atggtaatgtgcacccctttggatggagccctctactcagcagctactccgtccagtagt
gaggacacggaaaccgtatcaaacagcagcgaagggaagagtggctccccacacgatctc
ttggagaccatctttgtccggaaggtgggggcctttgtcaacaaacccattaatcaggtg
accatggccagcttggacattcctttcgccatgtttgctcccaagaatgttgagctggag
gataatgaccccatggtgaatcctcctgactccccagacattgagtctcctctacagggc
agcttgcactcagagggctccagtggcagcagcaccgggaacacacatgacgactttgtc
atggttgactttaaaccagcattctcaaaagatgacattctcccaatggacttggggacg
ttctaccgcgagtttcagaacccccctcagctcagcagcctctccattgacattggggct
cagtccatggcagaggatctggactcgttaccggagaagctggcagtccatgagaaaaac
gtcaaagagtttgatgcctttgtagagactttgcagtaa
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integrated database retrieval system
