Trachemys scripta elegans (red-eared slider): 117876960
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Entry
117876960 CDS
T07347
Symbol
PLCB2
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2 isoform X1
KO
K05858
phosphatidylinositol phospholipase C, beta [EC:
3.1.4.11
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00562
Inositol phosphate metabolism
tst01100
Metabolic pathways
tst04020
Calcium signaling pathway
tst04070
Phosphatidylinositol signaling system
tst04081
Hormone signaling
tst04082
Neuroactive ligand signaling
tst04261
Adrenergic signaling in cardiomyocytes
tst04270
Vascular smooth muscle contraction
tst04310
Wnt signaling pathway
tst04371
Apelin signaling pathway
tst04540
Gap junction
tst04621
NOD-like receptor signaling pathway
tst04912
GnRH signaling pathway
tst04916
Melanogenesis
Module
tst_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
117876960 (PLCB2)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117876960 (PLCB2)
04371 Apelin signaling pathway
117876960 (PLCB2)
04020 Calcium signaling pathway
117876960 (PLCB2)
04070 Phosphatidylinositol signaling system
117876960 (PLCB2)
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117876960 (PLCB2)
04081 Hormone signaling
117876960 (PLCB2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
117876960 (PLCB2)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117876960 (PLCB2)
09152 Endocrine system
04912 GnRH signaling pathway
117876960 (PLCB2)
04916 Melanogenesis
117876960 (PLCB2)
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
117876960 (PLCB2)
04270 Vascular smooth muscle contraction
117876960 (PLCB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117876960 (PLCB2)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
117876960 (PLCB2)
Membrane trafficking [BR:
tst04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
117876960 (PLCB2)
Endocytosis
Macropinocytosis
Phospholipase C
117876960 (PLCB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLC-beta_C
PI-PLC-X
PH_14
PI-PLC-Y
PLCB1-4-like_EFh
EF-hand_like
C2
Motif
Other DBs
NCBI-GeneID:
117876960
NCBI-ProteinID:
XP_034625476
LinkDB
All DBs
Position
4:complement(58947946..59018303)
Genome browser
AA seq
1229 aa
AA seq
DB search
MSMLTPILKPLEVKEYLSKGERFIKWDDDTTNASPVILRVDPKGFYLYWTYQNKEMEFLD
ITSIRDTRVGKFAKIPKSQKLREVFNLDFPDNNFLLKTLTVVTGTDMVDLTFHNFVSYKE
RVGKSWAEDIMAIVRNPLTFNASRYTFLEKILVKLKMQLSAEGKIPVRNIFQLFPADRKR
VEAALHACHLPKGKNDAINPEDFPEKVYKTFLMNLCPRPEIDEIFTSHHSKAKPYMTKEH
LAKFINKKQRDSRLNDILFPPAKPEQVQGLIEKYEPSGINIQRGQLSPEGMVWFLCGPEN
NIVSLDKVVLYQDMTQPLSHYFINSSHNTYLTAGQFSGISSPEMYRQSLLSGCRCVELDC
WKGRPPDEEPIITHGFTMTTEILFKDVIEAIAESAFKTSLYPVILSFENHVDSPKQQAKM
AEYCRTIFGDMLLTEPLEKYPLKPGVPLPSPQDLLGKILIKNKKNQSAFEDRRDSLKKER
NEATDQPVTVDVWAGDVTEEDPEEEEEESGNLDEEQIKKMQSDEGTAGLEVTAYEEMSSL
VNYIQPIKFDSFDTSTEQNRSYVISSFTEIKAYDLLTKSAVQFVEYNKRQMSRIYPKGTR
MDSSNYMPQMFWNVGCQMVALNFQTMDVPMQQNMALFEFNGQSGYLLKHEFMRRPDKQFD
PYSVDRIDVVVASILSITILSGQFLSERSVKTYVEVELFGLPGDPKRKYRTKLTSSANSL
NPVWKEEAFVFEKILMPELASLRIVALEEGGKFIGQRIIPIIAVHSGYHHVCLRSESNMP
LTMPSLFVYLEMKDYVPDTWADLTVALSNPIKFFNTQDKSSVKLKQGSAEGPDMQKKLTA
AQTNGLPNSTRTFSLHSSNGPAGAMALGKEETKKEVAKEVAELQTASLEELQKMKLFMKL
LKKQEKELKELERKGSKRREELLQRYSALFSELVTQCGRKKIACPRKTQKKKRSLTVEEV
SAGGNPAEMAENADSRVLELKEKLEMDLMQVWEEQYDGIRKKKEQHATEQIARLIEVARE
KQAAELKALKESSESDTKEIKKKLEAKRLDRIQVMTKSTIDKTAQERLKREINNSHIQEV
VQMIKLMTEKMIKYQEKLEEKQADCLEKIKEKESQLQKEALAEYEEKVKTLSMEVQDLAS
NCVKVCFPLEANIKKEEALNTSSEGKQGSKDQPEGKIPVAEISGLETSMAETSIAQTQKE
ALPQTRSELECHFKEPHAISAPFSLSQTE
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgctcacacccatcctgaagcccctcgaggtgaaggagtatctatccaagggc
gagcgcttcatcaagtgggacgatgacacaacgaatgcttcgcctgtgattctccgggta
gatccaaagggtttttacttatattggacatatcagaataaggaaatggaatttttggat
ataaccagcatccgagacacccgagtaggaaaatttgccaaaatccccaagagccagaag
ctccgagaggtttttaacttggatttcccagacaacaacttcctgctcaaaaccctgact
gttgtgaccggcaccgatatggtggatctcacattccacaattttgtctcctacaaagag
agagttggcaagagctgggctgaggatatcatggccatcgttagaaacccactgacattc
aatgcatctcgctacactttcctggagaaaatcctggtgaagctgaagatgcaactcagc
gctgaaggaaaaattcctgtcaggaatatttttcagctgtttcctgcagacaggaagagg
gtagaagctgcattacatgcttgtcaccttccaaagggcaagaatgatgcgatcaatcca
gaggacttccctgagaaagtgtataaaaccttcctgatgaacctgtgtccccgtccggag
atcgatgagatattcacctctcaccattcgaaagccaagccctacatgaccaaagagcac
ttggcaaagtttatcaacaagaaacagcgagattcccgcctcaatgacatccttttccct
cctgccaaaccagagcaggtgcagggcctgatagagaagtatgaacccagtgggattaac
atccagagagggcagttgtctccagaggggatggtttggttcctctgtggccctgaaaac
aatattgtatcactggacaaagtggtgctgtaccaggacatgacccagccactctcacat
tacttcatcaactcatcacacaacacctacttgacagctggccagttttctggcatctca
tctcctgaaatgtatcgccagagcctgctgtctggctgccgttgtgtggagctggactgc
tggaagggtcgtcccccagatgaggagcccatcatcacccatggattcaccatgacaact
gagattctcttcaaggatgtcattgaggccattgcagaaagtgctttcaaaacctctctc
tacccagttatcctgtcctttgagaaccatgttgactcgcccaagcagcaggctaagatg
gctgagtactgcaggaccatattcggggacatgctgctgacagagccactagaaaaatat
ccactgaagccgggcgttcccttgccaagccctcaggatctcttagggaaaatcctgatt
aagaacaaaaagaaccaatctgcatttgaagataggcgggactctctgaagaaagagagg
aatgaagctactgaccagcctgtcacagtggatgtctgggcaggtgatgtgaccgaagag
gacccagaggaagaggaggaggaatctggaaacttggatgaagaacagattaaaaagatg
cagtcagatgagggcactgctggcttggaagtgacagcttacgaggaaatgtccagcctg
gttaattacatccagcccatcaaatttgactcctttgatacctcaacagaacagaaccga
agttatgtcatctcctccttcaccgaaataaaggcttatgatctactgaccaaatccgct
gtgcagtttgtagaatataacaagcgacagatgagccggatttaccccaagggcacccgg
atggactcatccaactacatgcctcagatgttctggaacgtcggctgtcaaatggtggcc
ttaaacttccagacaatggatgtccccatgcaacagaatatggccctctttgagttcaac
ggccagagcggctaccttctcaaacacgaattcatgcggcgtccagacaagcagtttgac
ccttactctgtggaccgcattgacgtggtggtagcaagcatcctgtcaataacgatcctt
tctggccagttcctctcagagcgcagcgtgaagacatatgtagaagtggaactgtttggt
ttgccaggggacccaaaacgtaaatacagaaccaagctgacatcaagtgccaattccctc
aaccctgtatggaaggaggaggcttttgtttttgaaaagattctgatgccagagttggct
tctctcagaattgtggctttggaggaaggaggaaagttcattggtcaacgcatcattccc
attattgctgtgcattcaggctatcaccacgtttgccttcgcagtgagagtaacatgcca
ctcactatgccctccctctttgtgtacctggagatgaaggactatgtccctgacacttgg
gcagatctgaccgttgctctctccaaccccattaagttctttaatacccaggacaagagt
tcagtgaagctgaaacagggttctgcagaggggcctgacatgcagaagaagcttacagca
gctcaaaccaacgggttaccaaattccaccaggacttttagtttgcattcttcaaatgga
cctgcaggagctatggccctggggaaggaagaaactaaaaaagaagttgcaaaagaagtt
gcagagctccaaacagccagccttgaggaactgcagaagatgaagctttttatgaagctg
ctgaagaaacaggagaaggagctgaaggagctggagcgaaagggaagcaagcgcagggaa
gagctgctgcagagatattcagccctgttctccgagttggtcacccagtgtggcaggaag
aagatcgcatgccctcggaaaacccagaaaaagaaaaggagtttgactgtagaggaggtc
agtgcaggagggaatccagcagagatggcagagaatgctgacagccgagtcttggagctg
aaggagaagctggaaatggacctaatgcaagtgtgggaagagcagtatgatgggattcgg
aaaaagaaagagcagcatgccacagagcaaattgccagactaatagaagtagcaagggag
aagcaggcagctgagctgaaggcactgaaggaatcgtcagaaagtgatactaaagagata
aagaagaagctggaggcaaagagactggaccgaatccaagtcatgaccaagagtaccatt
gacaagactgctcaggagagattaaagagagaaattaataattcacacattcaggaagtg
gtgcagatgatcaaactgatgacagaaaagatgatcaagtaccaagagaaactggaagag
aagcaggcagattgtttagaaaagatcaaggagaaagaaagccagctccagaaggaggcc
ttggcagaatatgaggagaaagtgaaaacccttagcatggaggtacaagatttggcaagc
aactgtgtgaaagtctgcttccctctggaggctaatatcaagaaggaagaagccctgaac
acaagcagtgaaggaaaacaaggctctaaggaccaaccagaaggaaagatacctgtagct
gagatatcagggcttgagacatccatggctgagacctccatagctcagacccaaaaagag
gcgcttccacagactagaagcgagttggaatgtcactttaaggaacctcatgccatcagt
gcaccattttccctctctcaaacagaatag
DBGET
integrated database retrieval system
