Trachemys scripta elegans (red-eared slider): 117876971
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Entry
117876971 CDS
T07347
Symbol
SAMD4A
Name
(RefSeq) protein Smaug homolog 1 isoform X1
KO
K27396
protein Smaug
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117876971 (SAMD4A)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
117876971 (SAMD4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
117876971
NCBI-ProteinID:
XP_034625493
LinkDB
All DBs
Position
4:9777422..9986010
Genome browser
AA seq
746 aa
AA seq
DB search
MLMSSMWGAGARGSARLSLAQPGARRCCCTARRDRALPAPRHGTAGAPPAAARLTAARHL
PQPPEGAGGQHGGEPGIINQWQQESKDKVISLLLTHLPLLKPGNIEAKVEYMKLLPKILA
HSIEHNQHIEESRQLLSYALIHPATSLEDRSALAMWLNHLEDRTSGSFGSQNRGRSDSVD
YGQTHYYHQRQNSDDKLNGWQNSRDSGICVSASSWQDKNLGCENGHLPLYSSSSVPTTIN
TIGTNTSTILSGQTHHSPLKRSVSLTPPMNVPNQPLGHGWMSHEDLRARGPQCIPSDHAP
LSPQSSVASSGSGGSEHLEDQPSARNTFQEEGSGMKDVPAWLKSLRLHKYAALFSQMTYE
EMMALTECQLEAQNVTKGARHKIVISIQKLKERQNLLKSLERDILEGGNLRIPLQELHQM
ILTPIKAYCSQNSNTDDQSRDLDSHHLPSLIGSDSQGSDCKDSASGCIQQHHLPGCEGES
GGAPLPEGDLPGQFTRVMGKVCTQLLVSRPDEENISSYLQLIDKCLIHEAFTETQKKRLL
SWKQQVQKLFRSFPRKSLLDISGYRQQRNRGFGQSNSLPTAGSVGAGMGRRNPRQFQIPS
RNLPPTRLGLLGPSGLLGAAQRSAATNPTILKQGRQNLWFANPGGSNSMPSRTHSSVQRT
RSLPVHTSPQTMLMFQQPEFQVPVTEPDINNRLESLCLSMTEHALGESCAWSVIGTVDFI
GGSRHDKPTHTSQRFLTDGVDRTSTI
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgctaatgagtagcatgtggggagctggggcgcggggctcggcgcggctcagtctcgcc
cagccaggcgcccggcgctgctgctgcaccgcccggcgggatcgcgccctgcccgctccc
cgccatggcacggccggggcgccgccagccgcagcccgcctgacagccgcgaggcacctg
cctcagcctcccgagggagccgggggtcagcatgggggggagccaggaatcattaaccaa
tggcaacaggaatccaaggataaagtgatctccctattgttaacccatctgcctttactg
aaaccaggaaacattgaagcaaaagtggaatacatgaaactgttgcctaaaatcctggct
cattcgattgaacacaaccaacacatagaagagagcaggcagcttttgtcctatgctttg
atccatcctgccacttcactggaagacaggagcgctctggccatgtggctcaatcactta
gaggatcgcacatcgggtagttttggcagccaaaacagaggtcggtccgattctgtggat
tatggacagacacattactatcaccaaagacagaactctgacgacaagctgaatgggtgg
cagaactctcgagattctgggatatgtgtcagtgcttccagctggcaggacaaaaacctg
gggtgtgagaacggccatttgcccctctactcttcttcttctgtccccactacgatcaat
actatcggaactaatacaagcacaattctctcaggccagacacaccacagccctttgaaa
cgatctgtgtcccttaccccacccatgaatgtgccaaaccagcctctaggacatggatgg
atgtctcatgaggatttacgagctagaggaccccagtgcatcccctccgatcacgccccc
ctgtctccacagagcagtgtagcctcttcgggaagtggtgggagtgaacatttagaagat
cagccttccgctcgtaacacattccaggaagaagggagtggtatgaaagatgttcctgcc
tggctgaagagtctccgcctgcacaagtatgcagctcttttctcccagatgacatacgaa
gaaatgatggcactgaccgaatgccagctcgaggcacaaaatgttaccaaaggtgcaagg
cacaaaatagtcatcagtatccaaaagctgaaagagaggcagaatcttctcaagtcttta
gaaagggacatcctggaaggtggcaacctgcgcatcccactgcaggagctacaccaaatg
atcctcaccccaatcaaagcctactgctcccagaactcaaatacagacgaccagagccgg
gacctggattcccaccacctgccttctctgatcggctcggacagccaaggctccgactgc
aaggactctgcctctgggtgcatacagcagcaccacttgcctggctgcgagggcgagtct
ggaggggcacctttgcccgaaggggatctccctgggcagttcacaagagtcatggggaaa
gtatgtacacaacttttagtttccagacctgacgaggagaatataagttcctatttacag
ctcatagacaaatgtctaattcatgaggcatttacagagacacagaagaaaagattgttg
tcatggaaacagcaggtgcaaaaactcttcaggtctttccctcggaaatcccttctagac
atatcaggatatcggcagcaaagaaatcgaggctttggccagtcgaactccttaccaaca
gctggctctgtcggtgcaggaatgggcagacggaacccacgccagttccagattccctcc
cggaatctcccccccacccggctgggtctgctgggccccagtggactcctaggagctgca
caacgcagcgcagctaccaacccaaccatcctgaaacaaggaagacagaatctctggttc
gcaaaccccgggggtagcaacagcatgccaagccggacccatagctccgtgcagaggacg
cgttccctgcccgtccacacatccccacagaccatgctgatgtttcagcagccagagttc
caggtaccagtgacagaacctgacatcaacaacaggctggagtccttgtgcctgagtatg
actgaacatgccctgggggagagctgtgcatggagcgtcataggcactgtggatttcatt
ggcgggagcaggcatgataagcccacgcacacctctcagcgctttctgactgacggcgtg
gacagaacctctacgatatag
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