Trachemys scripta elegans (red-eared slider): 117876978
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Entry
117876978 CDS
T07347
Symbol
MNAT1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03022
Basal transcription factors
tst03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117876978 (MNAT1)
09124 Replication and repair
03420 Nucleotide excision repair
117876978 (MNAT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tst03021
]
117876978 (MNAT1)
03400 DNA repair and recombination proteins [BR:
tst03400
]
117876978 (MNAT1)
Transcription machinery [BR:
tst03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
117876978 (MNAT1)
DNA repair and recombination proteins [BR:
tst03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
117876978 (MNAT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
zf-C3HC4
TRAF3_RING
DUF3292
zf-UDP
Motif
Other DBs
NCBI-GeneID:
117876978
NCBI-ProteinID:
XP_034625518
LinkDB
All DBs
Position
4:14042492..14236281
Genome browser
AA seq
309 aa
AA seq
DB search
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVELLFVRGAGNCQECNTPLRKNNFRV
QLFEDPAIDKEVEIRKKVLKVYNKREDDFPSLTEYNDFLEEVEEIVFNLTNNVDLENTKK
KMDMYQKDNKEVIQKNKIKLTREQEELEEALEVERQENEQRRLFIQKEEQMQQIIKRKNK
QALLDELESSHLPASLLLAQHKDRSTQLEMQLEKPRPVKPVTFSTGIKMSQHISLAPIQK
LEEALYEYQPLQVETYGPQVPEPELLGRLGYLNHVRATSPQDLAGGYTSSLACHRALQDA
FSGLFWHPS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggatgaccagggctgcccgcggtgcaagaccaccaagtaccggaacccttccctgaag
ctgatggtgaatgtctgcgggcacacgctatgcgagagttgtgtggagctgctgttcgtc
cggggggccggaaactgtcaggagtgtaataccccgctgcggaagaacaacttcagagtg
cagctttttgaagaccctgccattgacaaggaggtggaaattcgcaagaaagtattgaaa
gtatacaataaaagagaagatgactttcccagtctaacggaatataatgatttcctggaa
gaagtagaagaaattgtgtttaacttgacgaacaatgtggatttggagaacaccaaaaag
aaaatggatatgtaccagaaggataacaaagaagtcattcagaaaaacaagataaaactg
actcgggagcaagaggagctggaggaagctttagaggtggaacgacaggaaaatgagcaa
aggcgactgttcatacagaaagaggaacaaatgcaacagattataaaaaggaagaataaa
caggcacttctggatgaactggaaagttcccatctgccggcctccctgctcttagctcaa
cataaagacagatctacgcagctagaaatgcagctggaaaaacccagaccagtcaaacca
gtcacattttccactggcatcaaaatgagtcagcatatttcattagcgcccatccaaaaa
ctggaggaagcactgtatgagtatcagccactgcaagtcgagacctatggaccacaagtt
ccagaacctgaacttctaggaaggctaggatatctaaaccatgtccgagccacctctcca
caggatcttgctgggggctacacttcctccctggcttgtcaccgagccctacaggatgct
ttcagtgggcttttctggcatcccagctag
DBGET
integrated database retrieval system
