Trachemys scripta elegans (red-eared slider): 117876992
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Entry
117876992 CDS
T07347
Symbol
LRRC4C
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117876992 (LRRC4C)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
LRR_1
LRR_14
V-set
Ig_2
LRR_9
LRRNT
LRR_LRWD1
Ig_6
Sp38
Herpes_gE_N
Syndecan
Motif
Other DBs
NCBI-GeneID:
117876992
NCBI-ProteinID:
XP_034625537
LinkDB
All DBs
Position
4:77016940..77160466
Genome browser
AA seq
637 aa
AA seq
DB search
MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLTAIRPGSFQ
GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHLERIHLHHN
PWNCNCDILWLSWWIKDKAPSNTACCARCNTPPNLKGRYIGELDLNYFTCYAPVIVEPPA
DLNVTEGMAAELKCRASTSLTSVSWITPNGSVMTHGAYRVRIAVLSDGTLNFTKVTVQDT
GLYTCMVSNSVGNTTASATLNVTALDNGYTYFSTVTVETMEPSQDEARTTEQIGPTPVID
WETTNVTTSLTPQSTRSTEKTFTIPVTDASNGIPGIDEVMKTTKIIIGCFVAITLMAAVM
LVIFYKMRKQHHRQNHHAPTRTVEIINVDDELTGDTPIESHLPMPAIEHEHLNHYNSYKS
PFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgaccttacatccacagcagataatgataggtcctaggtttaacagg
gccctatttgaccccctgcttgtggtgctactggctcttcaacttcttgtggtggctggt
ctagtcagggctcaaacttgcccttctgtctgctcctgcagcaaccagttcagcaaagtg
atttgtgtgcggaagaatctgagagaggttccagacggcatctccaccaacacacggtta
ttgaatctccatgaaaaccagatccaaataattaaggtgaatagcttcaaacatttgaga
cacctggaaatcttgcagctgagtagaaatcacattagaaccattgaaataggggccttc
aatggtctggccaatctcaacactctggaactttttgacaatcgtcttaccaccatccct
aatggggcttttgtatacctgtcaaaattgaaggagctttggttgagaaacaatcctatt
gaaagcatcccttcttatgcttttaacagaatcccttccctacgtaggttggatttgggg
gaactaaaaaggctttcatacatctcagaaggtgcctttgaaggtctatccaatttgagg
tatttgaaccttgctatgtgcaaccttcgagagatccctaacctcacaccactcataaaa
ctggatgagttagatctttctggtaaccatctgacagccatcaggccggggtccttccaa
gggttaatgcatcttcaaaaattgtggatgatacagtcccagattcaagtgattgaaagg
aatgcctttgataaccttcagtcactggtggaaatcaacctggcacacaacaacctaaca
ctactgcctcacgatctcttcacaccactccacctagaaaggatccacctgcaccacaat
ccttggaattgcaactgtgacattctttggctcagctggtggattaaggacaaagcaccc
tccaatactgcatgctgtgctcgctgcaacacacctcccaatttgaaaggaaggtacatc
ggtgagctggacctgaattatttcacgtgttatgctccggtgatagtggagccaccagca
gacctcaacgtcacagaaggcatggctgcagaactgaaatgccgagcatcgacctccctg
acctctgtatcttggattactccaaatggatcggttatgacgcatggggcatacagagtt
cggattgctgtgctcagtgatggcacattaaattttacaaaggtgaccgtgcaagacacg
ggcttgtatacctgcatggtgagtaactctgttgggaatactacagcttctgccacactg
aacgtcactgcactggacaatggttacacatacttttcaactgtcacggtagagactatg
gaaccttctcaggatgaggcacggaccacagagcagattgggcccacaccagttattgac
tgggagaccaccaatgtgacaacttctcttactccacagagcacaaggtcgacagagaaa
acatttaccatcccagtgacagatgcaagcaatgggatcccaggaatagatgaggttatg
aagactaccaaaatcataattggttgttttgtggctatcactctcatggccgctgtgatg
ctggtaatattctacaaaatgaggaaacagcatcaccggcagaaccaccatgctccaaca
cggactgtagagatcattaacgtggatgatgagcttacaggggatacacccatagagagt
cacttgcccatgccggcgatagagcatgagcacctaaatcattataactcttataagtct
cctttcaaccacacaacaacagttaatacaataaattcaatacacagttcagtgcatgaa
ccgttattgatccgaatgaactcaaaagacaatgtacaagagactcagatctaa
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