Trachemys scripta elegans (red-eared slider): 117877107
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Entry
117877107 CDS
T07347
Symbol
DCDC1
Name
(RefSeq) doublecortin domain-containing protein 1
KO
K23400
doublecortin domain-containing protein 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117877107 (DCDC1)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
117877107 (DCDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX2_DCDC1
DCX
Motif
Other DBs
NCBI-GeneID:
117877107
NCBI-ProteinID:
XP_034625770
LinkDB
All DBs
Position
4:complement(89762400..90183262)
Genome browser
AA seq
1884 aa
AA seq
DB search
MATEGASDPPERLQRPEMANDKRPVSAHVPCNPTFGESQRNNEFLTSSMSSCHNSVQTTV
VKQYVNKVITSSSHLHNFPRKFISPYAKTAIKNTDRKQICRQPLFGPNIHLQSTMISRRS
GLQDRSTHQTKSVQNSDRISDLGSYKSNSTNNFCLISPSKRNRPVSAPAGQLRCTQFSSS
RLQLAQKESEVPQVIKCQPRVIKVTAYKNGTRSIFAKIAVPSIKLLLEECTEKLNLNMAA
RRVFLADGTEALEPKDIPHDADIYISTGEPFLDPFKKIKDHLSLMKKVTWTMNGLVLSTG
AKRRKTKPVLSNRMKKLIKKSSLRILVFKNCSGQDGYEIIAAQDQIEKFLDACTIRMNLT
SPAKHLYNIHGAKIEDLISVPLLDKCLQNSITPLRGPVWVSKGEGFSPSGAKMYIHGVLL
ALHQRLKSAKNYCKQMDFAIDGQRGEITEKGILSMTTEELYLEQEKVNKLIEELQVVIKS
YKGHLSKLAPQLQAEQEQCASYVYQHIKRLPANMVLPQGLQLKVYENGKDTGEILVYITK
KEMENNCRNQPSVMMERLLHMIHEKLQYSADFKPTGLNLIPARLFDEKGQEIKNPLLLKN
EQKIWVSYGKDYRSPLNRVLSLTFDKVTAAEKDGITVIYKTLLDPNVDLLPGCDNWEACT
KFPGNFQCTNHQTLQNLEKVDMDSHFIQYKADPQIVFHVSVAMDKMKKALPRRMDYRDLK
VPSTLWPLANMWLITKAGMILSRALVQSCLAIGHPIRVETDDGISLEGYKLTVQKRDKSS
IYQHWGFGNDGSIYCKAYPEFVLTYLEELNVREEVTQMEHHIHHGAWSTAHQEIESSSAE
EVTVPSQRQVLQKNVNNSNQKQLSGPLDAHLMPAGPLRESMQLTVALVRKLEEKHPKASA
QRWAIKHEGTTKPDQWKHSKVENPLWNKLTYMWPVLPNGELNEDFDWPIEGLLVPNSPSL
KKPAGRKSDWYIPVRLRALHNGDRDKSKAITIIGPDVTNMLNRQNIHPEKKQKTKENQKM
HPDEEPGMEIYKIEFQHFLDKCTTMLNLPTAARRLFTEKGVELFLLKDLERDQLVYVSCG
EPWIDPHLTMAQHKKRLLLNNLASDISAIHAYCIMCNPEILVLGVRSNIAAGAKLFVDRC
LVAFEEEKLTEELQENQTEEMFLNIKDDADLNSHAKSHLKTDAWHMKSKYSWQESFSDFH
DDDSFPKDKDKEFFENVELFQKYRPQPKLNSELQKAHRQQFEYRDKQIINCAFPGLVLGV
QDAILHAGTEVVLVEKKPDDTNQCWIWRDHDRTFHLMSDPNLVLAVSMPSMQPRYSKCAL
DMKGCAVVLQKYKEYSNGAANQKWHYMENAGVFSAFYSTVLDQEITAANHASVCTFSVTS
REKINQPGYYFLSPSGKQKFMICLACARAIRGKKELKKLPTGSMFFCASGSEEANNFSLG
PFKCVNVMKTDLSTLEAKNTLNYLEEVLASLRTETSIQTISEKISAAMNQKAVKIIAYRN
GAGYRNGQLIIASTFPMLLTMCTRQLELTRKACRLYTNDGILMLTLPDLVTWAVNECFRR
SDSEEDYKERTAITDNAEGGTALDVEDKYMEKVKIKSELSLMTPDSLNMIDDSLLTIILR
NPIEVWVSCGEPFLPLDALQKAAREEKQNWFEKDKILADLNAMKHKMRQLQGRRITAFKP
STLVPTKSPVQPIAVEGGWTEETQEEMKLMENIQHTETHFSEVQASQFKRSSPFSSKLLS
SKHRCLYDQPSAKRVWVYRNGYKPEQGVYAWGKTISELLDNCTTRLNMQQPAKALYTPDG
EPLQSWDEIERDMLLCVSAGNPFLSRKAIKQQVEVRAIYARIRKQQGPDATNIVVAPSEK
LKGQAKTPSSLLALTTSAHYHLNN
NT seq
5655 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagagggagcttctgatccgccagagcggctgcaacgcccagaaatggcaaat
gacaaaagaccagtaagtgctcatgtaccttgcaatccaacttttggggaatcacaaaga
aataatgaattcttaacttcatcaatgtcttcatgtcataacagtgtacaaactacagta
gtgaagcagtatgtgaataaagtcatcacatcttcttcccacttacataattttccaaga
aaatttatttccccctatgcaaaaacggcaattaaaaatactgacagaaagcaaatctgt
agacagcctctgtttggccctaatattcatctgcaatcgacaatgatatcaagaaggtca
ggacttcaagatcgttccacacatcaaacaaaatcagttcagaacagtgatagaatatca
gacctaggcagctacaaatcaaacagtacaaacaatttctgccttatatcaccatccaaa
agaaacagacctgtcagtgctccagcaggtcagctaagatgtacacagttctcttcctca
agactccagctggcccagaaagaatctgaagtgccccaagttattaaatgtcagccaagg
gtaatcaaagtaacggcttataagaatggcacaagaagtatctttgctaaaattgctgta
ccatccattaaactgctgctggaggagtgcactgaaaaactgaatctgaacatggctgca
cgacgagtgttcttggcagacggcacagaagcactagaacctaaagacataccccatgat
gccgacatttatatttcaactggagagccctttttagatccattcaaaaaaattaaagac
catctgtcattaatgaagaaagtaacttggacgatgaatggtctggttctttctactggt
gccaagagaaggaaaaccaagcctgtcctgtccaaccgcatgaagaagcttattaagaag
tcctcactcaggattttggtgtttaagaattgctcagggcaggatggctatgagattatt
gcagcacaggaccaaattgaaaagtttttagatgcttgcacaataagaatgaatcttact
tcaccagcaaagcatctgtacaacattcatggagcaaaaattgaagatctcatcagtgtt
cctctgcttgacaaatgcctgcaaaattccatcacacctttgcgtggacctgtttgggtc
tctaagggagaaggtttcagcccctcaggagcaaagatgtatatccatggagttcttttg
gccttacaccaacgattaaagtctgcaaaaaactattgcaaacagatggattttgccatt
gatggtcagagaggggaaatcacagaaaaaggcattctttcaatgacaacagaggaatta
tatttagagcaagaaaaggtgaacaagctcattgaggaattgcaagtggtcatcaagagc
tacaaaggtcacctctcaaaacttgccccacaattacaggctgagcaggagcagtgtgcc
tcttatgtctaccaacacattaaaaggcttccagcaaacatggttctcccacaaggcttg
cagctaaaggtgtatgaaaatggcaaagacacaggggagatcctagtttatatcaccaaa
aaagagatggagaataactgtaggaatcaacccagcgttatgatggagaggctgctgcat
atgattcacgaaaaactacaatactcagcagacttcaaaccaacaggcctcaatcttatt
cctgcccggctttttgatgagaaaggacaagaaattaaaaacccacttttactgaagaat
gagcaaaaaatttgggtttcttatggtaaagattacaggtctcccttaaaccgtgttcta
agtttgacctttgacaaagtgactgccgctgaaaaggatggtatcacagttatttataaa
actcttctggatcctaatgttgatctgctgcctggatgtgacaattgggaagcttgtaca
aaatttccaggcaacttccagtgcacaaaccaccagacacttcaaaacttggaaaaggtg
gacatggatagccattttatacagtacaaggccgatccacagatagtttttcatgtctct
gttgccatggataaaatgaagaaggcacttcccagaagaatggactatcgggatctaaaa
gtcccatcaacactatggcctctggctaacatgtggttaatcacaaaggctggaatgatt
ctgagtcgagctttggtacagagctgtctagctattggtcatccaattagagttgagaca
gatgatggcatatctctggaaggatacaagttaacagtacagaaaagagacaaaagcagc
atctatcaacactggggttttggaaatgatggttctatctattgtaaggcttaccctgag
tttgtcctgacctacctagaggagctaaatgtaagagaggaggtgacccagatggaacac
cacatccaccatggggcctggtctacagctcatcaggagatagagagcagctcagcagaa
gaggtcactgtaccaagccagaggcaggttctgcaaaaaaatgtcaacaactccaatcag
aaacaactttcaggacctttggacgcccatttaatgcctgcaggtcccctaagggagtct
atgcagctgacagtcgcactggtgaggaaactagaagagaaacatcctaaggcctcagct
caaagatgggctataaagcatgaagggacaactaaaccagaccagtggaaacattccaaa
gtggagaatccgctatggaataagctgacatacatgtggcctgtccttccaaatggagaa
cttaatgaggattttgactggccaattgagggattgctggttccaaacagtccttcactt
aagaaaccagctggcaggaagtcagattggtatatacctgtgagactgagggctttgcac
aatggagacagggacaaaagcaaggctatcaccatcattggacctgatgttacaaatatg
ctaaacagacaaaatattcatcctgaaaagaaacagaaaacaaaggagaaccagaaaatg
catcctgatgaagagcctggaatggaaatatacaagatagaatttcagcactttttggac
aaatgtactaccatgttgaatttacctactgctgctcgaagattattcactgaaaaaggc
gtggaactctttcttttgaaagaccttgagagagatcagctggtctatgtgtcatgtgga
gaaccgtggattgacccacacttgactatggctcagcacaaaaaacgtctcctactcaat
aatttagcgtcagatatatctgcaattcatgcctactgtatcatgtgtaaccctgaaatt
ctagttttaggagtaaggagcaatattgctgctggagccaaactttttgtggatagatgt
cttgtggcttttgaagaagaaaaactaactgaggagctgcaggaaaatcaaacagaagaa
atgtttctgaatataaaagatgatgcagatcttaattcacatgcaaaatcacatcttaaa
acagatgcttggcatatgaaatccaaatattcctggcaggaaagtttctctgattttcat
gatgatgacagttttccgaaggacaaggataaagaattctttgaaaatgtagagttattt
cagaagtacagacctcaaccaaagctgaattcagaattgcagaaggctcaccgtcagcag
tttgagtatagagacaaacagattataaactgtgcatttccagggcttgttttgggggta
caggatgctattctacatgctgggactgaagttgttttggtggaaaagaaacctgatgat
accaatcagtgctggatatggagagatcatgacaggacatttcatttgatgagtgatcca
aatctagtgctagcagtgtcaatgcccagcatgcagcctagatattcaaaatgtgcactg
gacatgaaagggtgtgctgttgttctgcagaaatataaagaatacagcaatggggctgcc
aatcaaaagtggcattacatggaaaatgcaggagtatttagtgccttttacagcacagta
ctggatcaagaaatcacagcagcaaatcatgcttctgtttgcacattctctgtgaccagt
agagaaaaaataaaccagccaggctactattttctttcacccagtggaaagcagaagttc
atgatatgcttggcttgtgcaagagccataagaggaaagaaagaactgaaaaaattaccc
acaggtagcatgttcttctgtgcctctggctctgaggaagcaaataatttctccttggga
ccttttaagtgtgttaatgtgatgaagactgatttatccacattggaagccaaaaatacc
ttgaattatttagaagaagttctagcatctttgcggaccgaaacctccatacaaacaatc
tcagaaaagatctctgcagctatgaaccagaaagcagtgaaaataattgcatacagaaat
ggagctggctaccgaaatggtcagttaatcattgctagcacattccctatgctgcttacc
atgtgtacaagacaacttgaacttaccaggaaagcctgcagactatataccaatgatgga
atcctaatgcttaccctaccagatttagtcacatgggctgtaaatgagtgtttcagacga
agtgactcagaagaagactacaaagagagaacagcaatcactgacaatgctgaaggtggg
actgcactggatgtggaagataagtacatggagaaagtgaagataaagtcagaattatcc
ttgatgactccagacagtttgaatatgatagatgattctttgctcaccatcatcctcaga
aatcctattgaggtctgggtttcctgtggagaaccttttctacctttggatgctttgcaa
aaggcagcaagggaagagaaacaaaactggttcgagaaggacaaaattttggctgatcta
aatgctatgaagcacaaaatgagacagctgcaagggcgacgaataacagcctttaaacca
tccaccttggtgcccacaaaaagcccagttcagcctatagcagtagaaggaggctggact
gaagaaacccaagaagagatgaaactcatggaaaatatacaacataccgagacacacttc
tcagaggttcaagcatcacagttcaaaagaagttctccattttcatctaaactgctgtca
tccaaacacagatgtctgtatgatcaaccatctgcaaaaagagtgtgggtttaccggaat
ggttataaacccgagcaaggagtttatgcctggggaaaaacaatttcagagctgctggat
aactgcaccaccaggctaaatatgcaacagcctgccaaggctctgtatacaccggatggt
gagccactccagtcatgggatgaaatagagagagacatgcttctgtgtgtttctgctgga
aatccttttctgagcagaaaagccatcaagcagcaggtggaagttagagctatttatgcc
agaatccgaaagcagcaaggtccagatgccactaatattgttgtcgctccttcagagaaa
cttaaaggacaggccaaaactcccagttcacttctggctcttacaaccagtgctcattac
cacctcaacaactag
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integrated database retrieval system
